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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001509
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 135 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 6.164s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0018979.1
n.a. PREDICTED: UDP-glucuronate 4-epimerase 5-like [Cicer arietinum] gi|502175956|ref|XP_004515772.1| chr0 7501168 7502433 +
2 domain predictions
2 GO terms
Lj0g3v0045929.1
n.a. PREDICTED: cinnamoyl-CoA reductase 1-like [Cicer arietinum] gi|502100302|ref|XP_004491683.1| chr0 15107772 15110813 -
2 domain predictions
2 GO terms
Lj0g3v0075949.2
n.a. Dihydroflavonol-4-reductase [Medicago truncatula] gi|357516625|ref|XP_003628601.1| chr0 28892735 28895982 +
2 domain predictions
2 GO terms
Lj0g3v0075949.3
n.a. PREDICTED: cinnamoyl-CoA reductase 1-like isoform X1 [Cicer arietinum] gi|502154963|ref|XP_004509912.1| chr0 28892735 28900586 +
2 domain predictions
2 GO terms
Lj0g3v0075959.1
n.a. PREDICTED: cinnamoyl-CoA reductase 1-like isoform X1 [Cicer arietinum] gi|502154963|ref|XP_004509912.1| chr0 28897285 28904798 +
2 domain predictions
2 GO terms
Lj0g3v0075959.4
n.a. PREDICTED: cinnamoyl-CoA reductase 1-like isoform X1 [Cicer arietinum] gi|502154963|ref|XP_004509912.1| chr0 28902133 28904798 +
2 domain predictions
2 GO terms
Lj0g3v0154629.2
n.a. n.a. chr0 72443163 72444874 -
2 domain predictions
2 GO terms
Lj0g3v0250699.2
n.a. Dihydroflavonol reductase [Medicago truncatula] gi|357458089|ref|XP_003599325.1| chr0 129964986 129969474 +
2 domain predictions
2 GO terms
Lj0g3v0250699.3
n.a. PREDICTED: cinnamoyl-CoA reductase 1-like [Cicer arietinum] gi|502129455|ref|XP_004500311.1| chr0 129965218 129969474 +
2 domain predictions
2 GO terms
Lj0g3v0283729.1
n.a. PREDICTED: GDP-mannose 3,5-epimerase-like isoform X1 [Cicer arietinum] gi|502117369|ref|XP_004495797.1| chr0 147094822 147099650 -
2 domain predictions
2 GO terms
Lj0g3v0283729.6
n.a. PREDICTED: GDP-mannose 3,5-epimerase-like [Glycine max] gi|356576698|ref|XP_003556467.1| chr0 147094822 147097143 -
2 domain predictions
2 GO terms
Lj0g3v0298519.1
n.a. PREDICTED: cinnamoyl-CoA reductase 1-like [Cicer arietinum] gi|502129455|ref|XP_004500311.1| chr0 155118073 155123260 +
2 domain predictions
2 GO terms
Lj0g3v0327049.1
n.a. PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like isoform X1 [Cicer arietinum] gi|502143680|ref|XP_004505424.1| chr0 170963619 170967411 -
2 domain predictions
2 GO terms
Lj0g3v0361519.1
n.a. Dihydroflavonol-4-reductase [Medicago truncatula] gi|357516625|ref|XP_003628601.1| chr0 190435929 190441906 +
2 domain predictions
2 GO terms
Lj0g3v0361519.3
n.a. Dihydroflavonol-4-reductase [Medicago truncatula] gi|357516625|ref|XP_003628601.1| chr0 190443403 190446572 +
2 domain predictions
2 GO terms
Lj1g3v1649010.1
n.a. Dihydroflavonol-4-reductase [Medicago truncatula] gi|357465477|ref|XP_003603023.1| chr1 19693780 19702203 +
2 domain predictions
2 GO terms
Lj1g3v1649010.2
n.a. Dihydroflavonol-4-reductase [Medicago truncatula] gi|357465477|ref|XP_003603023.1| chr1 19700333 19702203 +
2 domain predictions
2 GO terms
Lj1g3v2584610.1
n.a. Dihydroflavonol-4-reductase [Medicago truncatula] gi|357465477|ref|XP_003603023.1| chr1 29905714 29907065 -
2 domain predictions
2 GO terms
Lj1g3v2584620.1
n.a. Dihydroflavonol-4-reductase [Medicago truncatula] gi|357465477|ref|XP_003603023.1| chr1 29907386 29907702 -
2 domain predictions
2 GO terms
Lj1g3v2584630.1
n.a. n.a. chr1 29907386 29907727 -
2 domain predictions
2 GO terms
Lj1g3v4192290.1
n.a. UDP-sulfoquinovose synthase [Medicago truncatula] gi|357509541|ref|XP_003625059.1| chr1 49618594 49622316 +
2 domain predictions
2 GO terms
Lj1g3v4202330.1
n.a. UDP-sulfoquinovose synthase [Medicago truncatula] gi|357509541|ref|XP_003625059.1| chr1 49640721 49644443 -
2 domain predictions
2 GO terms
Lj1g3v4790750.1
n.a. PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic-like [Cicer arietinum] gi|502113049|ref|XP_004494526.1| chr1 57722862 57727120 +
2 domain predictions
2 GO terms
Lj1g3v4979970.1
n.a. PREDICTED: GDP-mannose 3,5-epimerase-like isoform X1 [Cicer arietinum] gi|502117369|ref|XP_004495797.1| chr1 60593616 60597481 -
2 domain predictions
2 GO terms
Lj1g3v5034590.1
n.a. PREDICTED: anthocyanidin reductase-like [Glycine max] gi|356573217|ref|XP_003554760.1| chr1 61444991 61448268 +
2 domain predictions
2 GO terms
Lj2g3v1154120.1
n.a. Dihydroflavonol-4-reductase [Medicago truncatula] gi|357488705|ref|XP_003614640.1| chr2 18159467 18162685 +
2 domain predictions
2 GO terms
Lj2g3v1240070.1
n.a. UDP-glucuronate 4-epimerase [Medicago truncatula] gi|357469707|ref|XP_003605138.1| chr2 19622905 19624912 +
2 domain predictions
2 GO terms
Lj2g3v2336350.1
n.a. PREDICTED: dihydroflavonol-4-reductase-like [Glycine max] gi|356500898|ref|XP_003519267.1| chr2 33695275 33697804 -
2 domain predictions
2 GO terms
Lj3g3v0013390.1
n.a. PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like [Glycine max] gi|356550654|ref|XP_003543700.1| chr3 286776 291499 -
2 domain predictions
2 GO terms
Lj3g3v0273590.1
n.a. PREDICTED: tetraketide alpha-pyrone reductase 1-like [Cicer arietinum] gi|502081126|ref|XP_004486774.1| chr3 1625260 1627418 +
2 domain predictions
2 GO terms
Lj3g3v1128880.1
n.a. PREDICTED: bifunctional polymyxin resistance protein ArnA-like [Glycine max] gi|356543530|ref|XP_003540213.1| chr3 15164378 15166783 +
2 domain predictions
2 GO terms
Lj3g3v1131210.1
n.a. PREDICTED: bifunctional polymyxin resistance protein ArnA-like [Glycine max] gi|356543530|ref|XP_003540213.1| chr3 15234297 15237636 +
2 domain predictions
2 GO terms
Lj3g3v2128240.1
n.a. PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like [Glycine max] gi|356522272|ref|XP_003529771.1| chr3 26763146 26767996 -
2 domain predictions
2 GO terms
Lj3g3v2148260.1
n.a. PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like [Glycine max] gi|356522272|ref|XP_003529771.1| chr3 26782232 26786771 -
2 domain predictions
2 GO terms
Lj3g3v2171530.1
n.a. PREDICTED: cinnamoyl-CoA reductase 2-like isoform X1 [Cicer arietinum] gi|502174542|ref|XP_004515542.1| chr3 26890451 26895997 -
2 domain predictions
2 GO terms
Lj3g3v2171530.2
n.a. PREDICTED: cinnamoyl-CoA reductase 2-like isoform X1 [Cicer arietinum] gi|502174542|ref|XP_004515542.1| chr3 26890451 26895997 -
2 domain predictions
2 GO terms
Lj3g3v2171530.3
n.a. PREDICTED: cinnamoyl-CoA reductase 2-like isoform X1 [Cicer arietinum] gi|502174542|ref|XP_004515542.1| chr3 26890727 26895997 -
2 domain predictions
2 GO terms
Lj3g3v2735150.1
n.a. Dihydroflavonol 4-reductase [Medicago truncatula] gi|357469605|ref|XP_003605087.1| chr3 33682475 33685293 -
2 domain predictions
2 GO terms
Lj3g3v2737450.1
n.a. UDP-glucuronate 4-epimerase [Medicago truncatula] gi|357469707|ref|XP_003605138.1| chr3 33758594 33761798 -
2 domain predictions
2 GO terms
Lj3g3v2995680.1
n.a. PREDICTED: bifunctional polymyxin resistance protein ArnA-like [Cicer arietinum] gi|502145749|ref|XP_004506161.1| chr3 37190864 37193891 +
2 domain predictions
2 GO terms
Lj3g3v3187340.1
n.a. PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Glycine max] gi|356550259|ref|XP_003543505.1| chr3 39227068 39231621 +
2 domain predictions
2 GO terms
Lj3g3v3386870.1
n.a. PREDICTED: epimerase family protein slr1223-like [Glycine max] gi|356545053|ref|XP_003540960.1| chr3 41899337 41901403 -
2 domain predictions
2 GO terms
Lj3g3v3613630.1
n.a. PREDICTED: cinnamoyl-CoA reductase 1-like isoform X1 [Cicer arietinum] gi|502154963|ref|XP_004509912.1| chr3 43634605 43641947 +
2 domain predictions
2 GO terms
Lj4g3v0423090.1
n.a. anthocyanidin reductase ANR1-4 [Lotus corniculatus] gi|85542838|gb|ABC71335.1| chr4 5633530 5636267 +
2 domain predictions
2 GO terms
Lj4g3v2020440.1
n.a. PREDICTED: UDP-glucuronate 4-epimerase 1-like [Glycine max] gi|356562525|ref|XP_003549520.1| chr4 28032533 28036645 +
2 domain predictions
2 GO terms
Lj4g3v2020450.1
n.a. n.a. chr4 28033589 28036645 -
2 domain predictions
2 GO terms
Lj4g3v2151390.1
n.a. GDP-L-fucose synthase [Medicago truncatula] gi|357511215|ref|XP_003625896.1| chr4 29772334 29774336 +
2 domain predictions
2 GO terms
Lj5g3v0108490.1
n.a. dihydroflavonol 4-reductase [Lotus japonicus] gi|73661157|dbj|BAE19953.1| chr5 1066628 1069593 -
2 domain predictions
2 GO terms
Lj5g3v0108500.1
n.a. dihydroflavonol 4-reductase [Lotus japonicus] gi|73661147|dbj|BAE19948.1| chr5 1071609 1104626 -
2 domain predictions
2 GO terms
Lj5g3v0108500.2
n.a. dihydroflavonol 4-reductase [Lotus japonicus] gi|73661147|dbj|BAE19948.1| chr5 1071609 1080022 -
2 domain predictions
2 GO terms