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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001567
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 13 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.795s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0319349.1
n.a. PREDICTED: mitochondrial intermediate peptidase-like isoform X2 [Cicer arietinum] gi|502127359|ref|XP_004499673.1| chr0 166722447 166732854 -
2 domain predictions
2 GO terms
Lj0g3v0319349.2
n.a. PREDICTED: mitochondrial intermediate peptidase-like isoform X1 [Cicer arietinum] gi|502127357|ref|XP_004499672.1| chr0 166722447 166733589 -
2 domain predictions
2 GO terms
Lj2g3v1402690.1
n.a. n.a. chr2 22093759 22100086 -
2 domain predictions
2 GO terms
Lj2g3v1402690.2
n.a. PREDICTED: neurolysin, mitochondrial-like [Cicer arietinum] gi|502135435|ref|XP_004502333.1| chr2 22093759 22100086 -
2 domain predictions
2 GO terms
Lj2g3v1467890.1
n.a. PREDICTED: oligopeptidase A-like [Glycine max] gi|356496657|ref|XP_003517182.1| chr2 23232034 23239319 +
2 domain predictions
2 GO terms
Lj2g3v1467890.2
n.a. PREDICTED: oligopeptidase A-like [Glycine max] gi|356531379|ref|XP_003534255.1| chr2 23234019 23238030 +
2 domain predictions
2 GO terms
Lj6g3v1177220.1
n.a. XH/XS domain-containing protein [Theobroma cacao] gi|508778768|gb|EOY26024.1| chr6 14352637 14356551 -
2 domain predictions
2 GO terms
LotjaGi2g1v0330300.1
n.a. Mitochondrial intermediate peptidase; TAIR: AT5G65620.2 Zincin-like metalloproteases family protein; Swiss-Prot: sp|Q94AM1|OOPDA_ARATH Organellar oligopeptidase A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|I1L4U3|I1L4U3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0330300 LjG1.1_chr2 80600860 80608809 +
2 domain predictions
2 GO terms
LotjaGi2g1v0330300.2
n.a. Mitochondrial intermediate peptidase; TAIR: AT5G65620.2 Zincin-like metalloproteases family protein; Swiss-Prot: sp|Q94AM1|OOPDA_ARATH Organellar oligopeptidase A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|I1L4U3|I1L4U3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0330300 LjG1.1_chr2 80600958 80607877 +
2 domain predictions
2 GO terms
LotjaGi3g1v0329900.1
n.a. Mitochondrial intermediate peptidase; TAIR: AT5G51540.1 Zincin-like metalloproteases family protein; Swiss-Prot: sp|F4KDA5|MIPEP_ARATH Probable mitochondrial intermediate peptidase, mitochondrial; TrEMBL-Plants: tr|A0A0R0KE54|A0A0R0KE54_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0329900 LjG1.1_chr3 69734707 69747107 +
2 domain predictions
2 GO terms
LotjaGi3g1v0329900.2
n.a. Mitochondrial intermediate peptidase; TAIR: AT5G51540.1 Zincin-like metalloproteases family protein; Swiss-Prot: sp|F4KDA5|MIPEP_ARATH Probable mitochondrial intermediate peptidase, mitochondrial; TrEMBL-Plants: tr|K7KJJ4|K7KJJ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0329900 LjG1.1_chr3 69734769 69746780 +
2 domain predictions
2 GO terms
LotjaGi6g1v0100000.1
n.a. Mitochondrial intermediate peptidase; TAIR: AT1G67690.1 Zincin-like metalloproteases family protein; Swiss-Prot: sp|F4HTQ1|MPRO1_ARATH Probable thimet oligopeptidase; TrEMBL-Plants: tr|A0A0B2QRU6|A0A0B2QRU6_GLYSO Neurolysin, mitochondrial; Found in the gene: LotjaGi6g1v0100000 LjG1.1_chr6 21721194 21735413 +
2 domain predictions
2 GO terms
LotjaGi6g1v0223200.1
n.a. XH/XS domain-containing protein; TAIR: AT1G80790.1 XH/XS domain-containing protein; Swiss-Prot: sp|Q9SAI1|FDM5_ARATH Factor of DNA methylation 5; TrEMBL-Plants: tr|I1MIE9|I1MIE9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0223200 LjG1.1_chr6 52781444 52793069 -
2 domain predictions
2 GO terms