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LotjaGi2g1v0330300.2

Overview

Field Value
Gene ID LotjaGi2g1v0330300
Transcript ID LotjaGi2g1v0330300.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Mitochondrial intermediate peptidase; TAIR: AT5G65620.2 Zincin-like metalloproteases family protein; Swiss-Prot: sp|Q94AM1|OOPDA_ARATH Organellar oligopeptidase A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|I1L4U3|I1L4U3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0330300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:80600958..80607877) extracted from Lotus japonicus Gifu genome v1.2.

ATGAGAAACGGTGGTGTTGTGGTTATTGCCCTTCTTATATCAAACATGCTCATGGCAACACGTCTCACCCTCACTCTCTC TATACCTCGCTCTGTTCACCCTCTCCTTAAACGCACTTCTCATTCCATTTCACTCCTCAAACAATTCCCTAAATCCCATC CTTGTCCCCTCTGGTCTTCTTCCTTCTCCTTCTGCCTCGACGCACTTCACAAGTCCACTTCCCCTTCTTCCTCCTCCTCC TCCTCCTTCACTTCCTACTCTTCTCCCTCCATGGCCGCCGCCGCCGCCGTCGAAGCCAACCCGCTTCTCCAGGACTTCGA CTTCCCGCCCTTCGATGTCGTTGAACCCAAATACGTGCGACCCGGCATTCGTGCCCTCCTCACCAAGCTGGTAACGAGTT CTCACCCTTTGGATTCTTCGTTGGGTTTTGGTTAATGGGTCTGAGTTGGTTTTGCGTTTTGGGGTTTTTCAATTAATGGG GTGTTTTTGTTTTTGTAGGAACGTGATTTGGAGGAGCTGGAACGCACTATCGAGCCGTCATGGCCGAAGTTGGTGGAACC CTTGGAGAAGATTGTAGATCGGTTGTCTGTTGTTTGGGGCATTGTCAATCATCTCAAGGCTGTTAAGGATAGTTCTGAGC TGCGTTCTGCCATTGAAGATGTTCAGGTATTTTTTGTAAATTGTTTTGGGGTTTTTGTTATGTGAATTTTTGGTCTTGTT CTGTTGATGGTACTGGTAGTGTTATATTTGTATAATAGTATAGTTGTTTTCTATGCATTTGGGATTTGTGAATTTTTGGG CTTGTTCTGTTGATAGTAGTGTTATATTTGTATAATAGTATAGTTGTTTTTCTGTTGCTCCTTTTTGTTTTTGGCCATCT GCTAAGAGGGCTTGTTCTTTGTTTGTAGGCAGAAAAAGTTAAGTTTCAGCTTAGACTGGGTCAAAGCAAACCTATTTATA ATGCATTCAAAGCCATTCGAGAGTCTCCTGAGTGGCAGACACTGAATGATGCTCGCAAACGAATAGTTGAAAGTAAGTTA CTAGAATATGTTATTGCTATGATGTTCTTGTATATTTCTGTACTGGCATGTTATTTTTTATTTTCAGTTGCTCAAATTGT TCTATGCTACATGACTAAAATTTTCTGATTTATGGATCCACTGCTTGATGCTGGGCTAGTTCTGAGTGTAAGAGAGATAT TGCTTGTGTTCTACTTTACCCAGTAACGATTGTATTTGTGCTCTTGCAGACCAAATAAAGGAGGCAGTTCTTAATGGTGT TTCTCTTGAAGATGATAAAAGAGAACAGTTTAATAAGATTGAACAGGTGTGCTACTTTAACTACTGAAAATAAACGTCAA TTGCGGCTGTTAGCAGCGTATGCTAATGAGTCCTGGTTCCCACCATTCAGAGTGATATGGACCTAATCTTTGGTTGTATC TCTATTTTATGGGAACTGGGCCTATCTTGTTCTCTAACTAGAGTGGAATGTGTGCGTCTTACAAACAAACCTCAATTGAA CAAATATTCAAAGATCATCTGAACCCAAATTATATAACATTATAAATGGAATGAATTAACTTATAATTTTTTTTTTTCAA ATCCTAATTATAAAACTGATGAACATATTGTAAGGGTGTAAGTAGGATTAGAAACTACAGTATCTAAGACCCAAACTAAT TTTTTGTTTTAATATTCTACTTGTTGGTAATTTTTATGTCTACTCATTTAGTTTGGGTCTAATTGTTGCTCCTACATATG CAACAGCCAGTAATCCAAATTCTATTGACAGTATATGCCAGTGAGCGATTTTGCTTAATATCCGAACTCTAAACTAGACC AAATATAATACTACACCTTAATGCTCACTTTCAGGTTGTGCTTTTTTAGTCTTATATATGCTTTTTCTTTGTCATGGTTT CATCCATAGGAGCTCGAAAGGTTATCACAAAAATTTGAGGAGAATGTTCTGGATGCAACAAAAAAGTTTGAAAAGCTGAT TACAGATAAGAAAGAGATTGAAGGATTACCTGCAACTGCTCTTGGGTTGGCTGCACAAAGCGCTGTGTCCAAGGTATATC ATGTTTACATTTTATGTTATTATAGTCACGTTATGACAATCGGCTATCTTTTTGAGTTTTGATTTCTTGGACGGGAAATG CAGGGGCATGAGAATGCCACCGCTGAGAATGGGCCGTGGGTAATCACATTGGATGCTCCGAGTTATATTGCTGTTATGCA ACATGCTCGCAACCGTTCTTTGCGTGAGGAAATCTACCGGGCATATATAACACGTGCTTCTAGTGGAGATTTGGATAATA CAGAAATAATTGAGCAAATTTTAAAGCTTAGGTTGGAAAAGGCCAATCTTCTCGACTACAAGAACTATGCTGAGGTATGA TTCGTTCCTTATTAAGAATACTAGTCTTTTGTAGGTTGCTGATGTAAACTCTATCAGGTTAGCATGGCATCCAAAATGGC AACTGTTGATAAAGCACAAGAACTTCTAGAAAAGCTCCGCAGAGCTTCTTGGGATGCTGCAGTACAAGGTAGTATAAGAT GTGTTTCTGATTTAATGTTTGCATCTTGCTACAAGTTGTATGTAGTTTTTTTAATTAATTTGTACTAGTAGTTATGTATG GGGAAATATCATATATATATATATATATGTATATATGAGCTAGACCTTCATTGTCATTGATTATTGCAAAATATTAAAAA TAGATGTGTACCATACCCTATATGTGATTTTCTTTTTAAGTTTGGTTTGTGTTTGTGAGTGTATGAGTAGATGTCCCCTA TATGCGATTTTCTATTTAAGTTTGGTTTGTGTTTGTGTTTGTGAGTGTATGAATGTCCGTTTTCTTTAATGAGGCAATAA CTTAGGTGTAATCTTTCTTCCCTGCAGATATGGAAGACCTTAAAATATTCTCCAAAGGTCAGGGTGCATTGGAAGCTGAT ACTTTGACGCATTGGGACATTAGCTTTTGGAGTGAGAGGCTACGTGAATCAAAATATGACATCAACGAGGTTACTCTCTC TCTCACTCACAGTTATCATTTGTTTATGGTTTTCTGCCCTTGTTCACTTCCTTGATTACTTTACTGCCTCAGGATTTAAT AAGGTGTTAGTCTTGCTTTTGTAATTGACATTTTAATTTAATTTGAAAAACTTATTTTTCTGCTGCTGTGTCTCTTAGGA AGAACTGCGTCCATATTTCTCTCTGCCAAAGGTTATTGATGAACTTTTTAACCTCGCAAAAACACTATTTGGTATTGAAA TCGAGCCAGCTGATGGTCTAGCACCGGTAACTAGATTTGCTTTTGTCCATCTATGGTTCTTGTACTGTGGAGCATCTATT TTAAACTTACTGACATATGATTGTTGTTTTCAGGTTTGGAATAATGATGTCAAGTTCTTTCGTGTAAAAGATTCTTCTGG TAGTCCAATTGCGTATTTTTATTTTGATCCTTATAGTCGTCCTGCTGAAAAAAGGCAAGGTGCATGGATGGATGAAGTGT TTGCTCGTAGTCGTGTATTATCACGTGATGGTACCTCAACAAGGTTGCCTGTTGCCCACATGGTGTGCAATCAAACACCT CCGGTAGGAAACAAGCCAAGTCTAATGACATTCCGTGAGGTAACCTCAGTTTTACTTGATCAATTTATCTATTTTATATT TTTAGCATTGATCGTTATCTGTGTAATAAAGAAAAGCTAATTCAGCTACACTAAGAGAGCAATAATTTCCCCGGGTAGTT TCTGGTTTACTTGTGTTTTCAAATTTTAGACTGTGTTTATCAACTATATATCAGAATGGCTTTTATTAATAGTTTGAGAT TTAATATTTGTTTAACTGCATGAATAGTCTCTTACAATTTTTCCAATTGAAATAGTTTTTTCAGTCCGCCTGTTTTAAAT TTGAAGAAAAACTTTTGGTTTTAAATGAACTTCAATATTGAAAATTCATGTTGGATAGCAGACAAAGTCATACTAATGAA GTTTCAAAGTTTCCTTGTTTCTTCCAAGGTAGCGCAGATTAGAATAAAATGGCTAAAATGAAAAGTACCTCTCTCCAGTT GATCAATTTCAGAAACCCCCACTGTGGTTTAAACTTAAACATGACTATAGTATAAAATCAATCCCTTGTTCACTACTCCC TAATGCTGCCCTTGTGTTCAAACTGTTTTTTCTTTTCTTCTGAAAAACAGGTTTTAGAAGTTGTTTCTGACATAATTTTT AAATTAAAAAGCTGAGAAGGGAATCAAACAAGCCCTAATATGCTAATTTGATAAGATGAGGGAGCCAAGTTGTTGAATTT GGAACTGCATTGGACTTTTTCAGTATTTTGAACTTGAACTGTAGTTGAAGGGATTTCTTACATTTTGTCCTAATAAAATT AATAGATCATTGAGGCTTGGCATACTTGATATGTAGAATGAGCTGCTGCTACTAAGTTGCTGATAATTATTATAAATTCA TTATGTTTCACAAAGTATCTGATTGTCTTCCCCTTTTTCTCAGGTTGAGACTGTCTTCCATGAATTTGGCCATGCACTTC AACATATGCTTACAAAGCAAGATGAGGGTCTGGTTGCTGGCATTAGGGGAATAGAGTGGGATGCTGTTGAATTACCTTCT CAATTCATGGAAAACTGGTGTTACCATAGGTAAGTAATAATGCATGTCCCTATGAAGTTTATGCTCTTGTTTTGCATGGA TGTTACTTTCATAACCAGAATGAAGAATGATCTTTGTATGTTATACCCAAACTGTATTCATCTTTTTTATTGAAGTCTAC AAAATAACTTTTGCAATATATTTGGGAAAATAAACTATTTCTAACTATACATTGTCCTGAGACATCAGTAATGCTTTTCA CTGGTTTTGATTCAATATTTCAACTTCTTTTCATTTCGTCACTATGGAGAGCCAAATTATTGGGTTTGTCTCTTAGTGAC CTGATCCATTTTAACCCCTTATTTGAGGTTGATGTGTTGCACATTAGTATATTTTGCTTATTTTTAACAGTCTTTCTTGA CCAGAGTATCTGTATCATGTTTTTTTTGAATTTATGGCATTTTTTTGTTGTGTTAGAGAGACTTTAATGGGAATTGCAAA GCATTTTGAAACTGGGGAGAGTCTCCCTGAAGAAGTCTATTTGAAGCTTGTTGCTGCCAGAACTTTTCGTGCGGGCTCTC TAAGTCTTCGACAGGTTAGTTGGAATGTATTGGTTACCCTATTAGCTTATAGTTTACCAATTCCAACTCCCTAATATGTA TCCATTGATATAATTTGCAGCTGAAATTTGCCAGTGTAGATCTAGAACTTCATTCAAAATATGTTCCAGGGGGATCAGAA TCTATCTATGATGTTGACCGTAGAGTTTTTGAGAGAACTCAAGTGATTCCTCCATTGCCAGAGGACAGGTTCCTCTGCAG CTTCAGTCATATATTTGCAGGTTTGCTTTGCCTCTTATATCTCTGTAATCATGCAGTATCTTGGTGAAACTCATTTCTTT ATCTGGATTTTGTATTTATTAGGAGGATATGCAGCTGGATACTATAGCTACAAGGTATAATCTACGTTGCTTTAATATTT ATGGACATATCTCGTAGTCCACTTCTTTTTGTTTTCTGATTTTAGTTTACCTATGCACTTGTTTTATATTCCTTTTTTAC CCTCTCCCCTCCTCTATAGAACTCCTCCTGCCTCTCAAACAGATGGGATAAACTATTATTCTCTATCTTATATTGAATTT GTCTATTGTGCAGTGGGCTGAGGTACTGTCTGCAGATGCTTTCTCTGCATTTGAAGATGTTGGATTGGATAACAGCAAGG TATATTTGATTTAACGAAGTACTACACTGTCAATAAGGATTGGCGAAGGCTTTTCTGTTTGCTTCAAAACTCCCTGTTTT TCATGATTATTTTTTAATTTAATAAAACGTTTTAGACTTTTAGCTTATCTTGTGCTGGTCCCTGAAAGATTGGATAGACT TTGGTCCTTGAAAGATAAGTGACATCAGTTAGTATTTCAATAATAGGAAATGGCATCAATTCAGTAACTCAATGATAGGA AAAAAATATTAATTTAGTCTCTCAATAGAAAATTACTTCCATTTAGTTCCAAAAGGACTGATTTTCATGTTGCTTAATTT AGTCCCTCAATAGAAAATGACATCCATGATTGAGGGTTTAAACTTCAAACAGTTTCTTAATTTCTCTCTCTCTGTTGTCT CACTTTTATTTTGGTCCATTCTTTGAAACCGTGCCTCCCAAGCCTTCAGTTTCATTTTCCTCAATTGGTGATGAACTGAT GATCCTGCAAACTCAAACTATTTCTTGAATGGTTTAAACTTATTGTTATTAGTATCAAACATGGTTATGTGATGTTTCTG GATGCCAATTATGACCTTGACCTGGACCCTTGTATGGTTAGAATGCTTCTCAAAACTTATTTGTTTGTGCTCATTGATCA TTATGTTCTTTACATAGGCTGTTAAAGAAACAGGACACAAGTTCCGGGAGACCATTCTTGCTCTTGGAGGTGGCAAGGAA CCACTGGAGGTGAGATCCTACATTAGATTTCCTCCCAACCTCTCTTTACTTTCATTTTTTTTCTGTGAAGTTAGCACTTA AAAGAAGTTCCAGAAAATATCGCACGAGATAAGCTATTATATTATATGAGCCTGTTTGGATACAGACTTTGTACTGTAGT TTATCTACTAAGAAAAACTCACTATATAACTCCAATAAGTGTTTGGTTTGCATTCAAACAGGTATATGAATTCACCAAAC ATCTTACTTGTGCTGAACATTTAATGCTGCTTTATGCAGGTCTTTGTGCAATTCCGTGGTCGAGAACCAACACCTGATGC GTTGCTCAGACACAATGGCCTAGTTGCAGCTTAAGGATAA 

CDS sequence (LotjaGi2g1v0330300.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAGAAACGGTGGTGTTGTGGTTATTGCCCTTCTTATATCAAACATGCTCATGGCAACACGTCTCACCCTCACTCTCTC TATACCTCGCTCTGTTCACCCTCTCCTTAAACGCACTTCTCATTCCATTTCACTCCTCAAACAATTCCCTAAATCCCATC CTTGTCCCCTCTGGTCTTCTTCCTTCTCCTTCTGCCTCGACGCACTTCACAAGTCCACTTCCCCTTCTTCCTCCTCCTCC TCCTCCTTCACTTCCTACTCTTCTCCCTCCATGGCCGCCGCCGCCGCCGTCGAAGCCAACCCGCTTCTCCAGGACTTCGA CTTCCCGCCCTTCGATGTCGTTGAACCCAAATACGTGCGACCCGGCATTCGTGCCCTCCTCACCAAGCTGGAACGTGATT TGGAGGAGCTGGAACGCACTATCGAGCCGTCATGGCCGAAGTTGGTGGAACCCTTGGAGAAGATTGTAGATCGGTTGTCT GTTGTTTGGGGCATTGTCAATCATCTCAAGGCTGTTAAGGATAGTTCTGAGCTGCGTTCTGCCATTGAAGATGTTCAGGC AGAAAAAGTTAAGTTTCAGCTTAGACTGGGTCAAAGCAAACCTATTTATAATGCATTCAAAGCCATTCGAGAGTCTCCTG AGTGGCAGACACTGAATGATGCTCGCAAACGAATAGTTGAAAACCAAATAAAGGAGGCAGTTCTTAATGGTGTTTCTCTT GAAGATGATAAAAGAGAACAGTTTAATAAGATTGAACAGGAGCTCGAAAGGTTATCACAAAAATTTGAGGAGAATGTTCT GGATGCAACAAAAAAGTTTGAAAAGCTGATTACAGATAAGAAAGAGATTGAAGGATTACCTGCAACTGCTCTTGGGTTGG CTGCACAAAGCGCTGTGTCCAAGGGGCATGAGAATGCCACCGCTGAGAATGGGCCGTGGGTAATCACATTGGATGCTCCG AGTTATATTGCTGTTATGCAACATGCTCGCAACCGTTCTTTGCGTGAGGAAATCTACCGGGCATATATAACACGTGCTTC TAGTGGAGATTTGGATAATACAGAAATAATTGAGCAAATTTTAAAGCTTAGGTTGGAAAAGGCCAATCTTCTCGACTACA AGAACTATGCTGAGGTTAGCATGGCATCCAAAATGGCAACTGTTGATAAAGCACAAGAACTTCTAGAAAAGCTCCGCAGA GCTTCTTGGGATGCTGCAGTACAAGATATGGAAGACCTTAAAATATTCTCCAAAGGTCAGGGTGCATTGGAAGCTGATAC TTTGACGCATTGGGACATTAGCTTTTGGAGTGAGAGGCTACGTGAATCAAAATATGACATCAACGAGGAAGAACTGCGTC CATATTTCTCTCTGCCAAAGGTTATTGATGAACTTTTTAACCTCGCAAAAACACTATTTGGTATTGAAATCGAGCCAGCT GATGGTCTAGCACCGGTTTGGAATAATGATGTCAAGTTCTTTCGTGTAAAAGATTCTTCTGGTAGTCCAATTGCGTATTT TTATTTTGATCCTTATAGTCGTCCTGCTGAAAAAAGGCAAGGTGCATGGATGGATGAAGTGTTTGCTCGTAGTCGTGTAT TATCACGTGATGGTACCTCAACAAGGTTGCCTGTTGCCCACATGGTGTGCAATCAAACACCTCCGGTAGGAAACAAGCCA AGTCTAATGACATTCCGTGAGGTTGAGACTGTCTTCCATGAATTTGGCCATGCACTTCAACATATGCTTACAAAGCAAGA TGAGGGTCTGGTTGCTGGCATTAGGGGAATAGAGTGGGATGCTGTTGAATTACCTTCTCAATTCATGGAAAACTGGTGTT ACCATAGAGAGACTTTAATGGGAATTGCAAAGCATTTTGAAACTGGGGAGAGTCTCCCTGAAGAAGTCTATTTGAAGCTT GTTGCTGCCAGAACTTTTCGTGCGGGCTCTCTAAGTCTTCGACAGCTGAAATTTGCCAGTGTAGATCTAGAACTTCATTC AAAATATGTTCCAGGGGGATCAGAATCTATCTATGATGTTGACCGTAGAGTTTTTGAGAGAACTCAAGAGGATATGCAGC TGGATACTATATGGGCTGAGGTACTGTCTGCAGATGCTTTCTCTGCATTTGAAGATGTTGGATTGGATAACAGCAAGGCT GTTAAAGAAACAGGACACAAGTTCCGGGAGACCATTCTTGCTCTTGGAGGTGGCAAGGAACCACTGGAGGTCTTTGTGCA ATTCCGTGGTCGAGAACCAACACCTGATGCGTTGCTCAGACACAATGGCCTAGTTGCAGCTTAA 

Protein sequence (LotjaGi2g1v0330300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MRNGGVVVIALLISNMLMATRLTLTLSIPRSVHPLLKRTSHSISLLKQFPKSHPCPLWSSSFSFCLDALHKSTSPSSSSS SSFTSYSSPSMAAAAAVEANPLLQDFDFPPFDVVEPKYVRPGIRALLTKLERDLEELERTIEPSWPKLVEPLEKIVDRLS VVWGIVNHLKAVKDSSELRSAIEDVQAEKVKFQLRLGQSKPIYNAFKAIRESPEWQTLNDARKRIVENQIKEAVLNGVSL EDDKREQFNKIEQELERLSQKFEENVLDATKKFEKLITDKKEIEGLPATALGLAAQSAVSKGHENATAENGPWVITLDAP SYIAVMQHARNRSLREEIYRAYITRASSGDLDNTEIIEQILKLRLEKANLLDYKNYAEVSMASKMATVDKAQELLEKLRR ASWDAAVQDMEDLKIFSKGQGALEADTLTHWDISFWSERLRESKYDINEEELRPYFSLPKVIDELFNLAKTLFGIEIEPA DGLAPVWNNDVKFFRVKDSSGSPIAYFYFDPYSRPAEKRQGAWMDEVFARSRVLSRDGTSTRLPVAHMVCNQTPPVGNKP SLMTFREVETVFHEFGHALQHMLTKQDEGLVAGIRGIEWDAVELPSQFMENWCYHRETLMGIAKHFETGESLPEEVYLKL VAARTFRAGSLSLRQLKFASVDLELHSKYVPGGSESIYDVDRRVFERTQEDMQLDTIWAEVLSADAFSAFEDVGLDNSKA VKETGHKFRETILALGGGKEPLEVFVQFRGREPTPDALLRHNGLVAA 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 3 3 -
SignalP_EUK 1 19 19 -
Phobius 1 19 19 -
Phobius 4 14 11 -
TMHMM 7 29 23 -
Phobius 15 19 5 -
Phobius 20 767 748 -
PANTHER 91 689 599 0.0
PANTHER 91 689 599 0.0
SUPERFAMILY 100 763 664 4.4E-153
Gene3D 110 646 537 3.2E-234
CDD 119 764 646 0.0
Coils 120 140 21 -
Gene3D 236 689 454 3.2E-234
Coils 241 272 32 -
Pfam 325 682 358 7.5E-100
Coils 381 401 21 -
PANTHER 697 767 71 0.0
PANTHER 697 767 71 0.0
Pfam 697 763 67 4.9E-11
Gene3D 697 762 66 1.2E-22

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Metalloendopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
Biological process Proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0330300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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