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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001976
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.404s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v1290580.1
n.a. 40S ribosomal protein S24A [Hevea brasiliensis] gi|313586511|gb|ADR71266.1| chr4 19099612 19100710 +
5 domain predictions
3 GO terms
Lj5g3v0308500.1
n.a. 40S ribosomal protein S24 [Medicago truncatula] gi|357441493|ref|XP_003591024.1| chr5 2905737 2907679 -
5 domain predictions
3 GO terms
Lj6g3v1641190.1
n.a. 40S ribosomal protein S24 [Medicago truncatula] gi|357441493|ref|XP_003591024.1| chr6 18532738 18535363 -
5 domain predictions
3 GO terms
LotjaGi4g1v0212600.1
n.a. 40S ribosomal protein S24; TAIR: AT5G28060.1 Ribosomal protein S24e family protein; Swiss-Prot: sp|Q8LC83|RS242_ARATH 40S ribosomal protein S24-2; TrEMBL-Plants: tr|I3S194|I3S194_LOTJA 40S ribosomal protein S24; Found in the gene: LotjaGi4g1v0212600 LjG1.1_chr4 49459824 49461954 -
4 domain predictions
3 GO terms
LotjaGi5g1v0032500.1
n.a. 40S ribosomal protein S24; TAIR: AT5G28060.1 Ribosomal protein S24e family protein; Swiss-Prot: sp|Q8LC83|RS242_ARATH 40S ribosomal protein S24-2; TrEMBL-Plants: tr|I3T0W4|I3T0W4_LOTJA 40S ribosomal protein S24; Found in the gene: LotjaGi5g1v0032500 LjG1.1_chr5 5350098 5352790 -
4 domain predictions
3 GO terms
LotjaGi5g1v0032500.2
n.a. 40S ribosomal protein S24; TAIR: AT5G28060.1 Ribosomal protein S24e family protein; Swiss-Prot: sp|Q8LC83|RS242_ARATH 40S ribosomal protein S24-2; TrEMBL-Plants: tr|I3T0W4|I3T0W4_LOTJA 40S ribosomal protein S24; Found in the gene: LotjaGi5g1v0032500 LjG1.1_chr5 5351899 5352689 -
4 domain predictions
3 GO terms
LotjaGi6g1v0270900.1
n.a. 40S ribosomal protein S24; TAIR: AT5G28060.1 Ribosomal protein S24e family protein; Swiss-Prot: sp|Q8LC83|RS242_ARATH 40S ribosomal protein S24-2; TrEMBL-Plants: tr|I3S194|I3S194_LOTJA 40S ribosomal protein S24; Found in the gene: LotjaGi6g1v0270900 LjG1.1_chr6 58519305 58525221 +
4 domain predictions
3 GO terms
LotjaGi6g1v0270900.2
n.a. 40S ribosomal protein S24; TAIR: AT5G28060.1 Ribosomal protein S24e family protein; Swiss-Prot: sp|Q8LC83|RS242_ARATH 40S ribosomal protein S24-2; TrEMBL-Plants: tr|I3S194|I3S194_LOTJA 40S ribosomal protein S24; Found in the gene: LotjaGi6g1v0270900 LjG1.1_chr6 58519776 58525179 +
4 domain predictions
3 GO terms
LotjaGi6g1v0270900.3
n.a. 40S ribosomal protein S24; TAIR: AT5G28060.1 Ribosomal protein S24e family protein; Swiss-Prot: sp|Q8LC83|RS242_ARATH 40S ribosomal protein S24-2; TrEMBL-Plants: tr|I3S194|I3S194_LOTJA 40S ribosomal protein S24; Found in the gene: LotjaGi6g1v0270900 LjG1.1_chr6 58522799 58525162 +
4 domain predictions
3 GO terms
LotjaGi6g1v0270900.4
n.a. 40S ribosomal protein S24; TAIR: AT5G28060.1 Ribosomal protein S24e family protein; Swiss-Prot: sp|Q8LC83|RS242_ARATH 40S ribosomal protein S24-2; TrEMBL-Plants: tr|I3S194|I3S194_LOTJA 40S ribosomal protein S24; Found in the gene: LotjaGi6g1v0270900 LjG1.1_chr6 58522902 58524755 +
4 domain predictions
3 GO terms