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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002182
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 683 results. Now displaying 1 of 14 with 50 rows per page. This search has taken 6.151s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0000209.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356506581|ref|XP_003522058.1| chr0 65706 71152 +
2 domain predictions
1 GO term
Lj0g3v0011949.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357458247|ref|XP_003599404.1| chr0 4519827 4520190 -
2 domain predictions
1 GO term
Lj0g3v0011959.1
n.a. n.a. chr0 4519827 4520190 -
2 domain predictions
1 GO term
Lj0g3v0036599.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357494411|ref|XP_003617494.1| chr0 11682173 11683519 +
2 domain predictions
1 GO term
Lj0g3v0044699.1
n.a. Disease resistance protein [Medicago truncatula] gi|357468563|ref|XP_003604566.1| chr0 14767737 14767998 +
2 domain predictions
1 GO term
Lj0g3v0044709.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356494937|ref|XP_003516337.1| chr0 14768125 14768526 +
2 domain predictions
1 GO term
Lj0g3v0044719.1
n.a. n.a. chr0 14768125 14768687 +
2 domain predictions
1 GO term
Lj0g3v0044919.1
n.a. TMV resistance protein N [Medicago truncatula] gi|357509247|ref|XP_003624912.1| chr0 14775594 14782094 +
2 domain predictions
1 GO term
Lj0g3v0044949.1
n.a. TIR; AAA ATPase [Medicago truncatula] gi|124361211|gb|ABN09183.1| chr0 14784475 14786461 -
2 domain predictions
1 GO term
Lj0g3v0045059.1
n.a. PREDICTED: TMV resistance protein N-like [Cicer arietinum] gi|502091202|ref|XP_004489475.1| chr0 14809885 14814337 +
2 domain predictions
1 GO term
Lj0g3v0047499.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357493209|ref|XP_003616893.1| chr0 15886067 15893084 -
2 domain predictions
1 GO term
Lj0g3v0050609.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357493209|ref|XP_003616893.1| chr0 17224612 17227251 -
2 domain predictions
1 GO term
Lj0g3v0062949.1
n.a. n.a. chr0 21229427 21232228 +
2 domain predictions
1 GO term
Lj0g3v0064119.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 22003038 22014728 -
2 domain predictions
1 GO term
Lj0g3v0064119.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 22003038 22014728 -
2 domain predictions
1 GO term
Lj0g3v0064119.3
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 22003038 22014728 -
2 domain predictions
1 GO term
Lj0g3v0070709.1
n.a. Disease resistance-like protein GS4-1 [Medicago truncatula] gi|357449965|ref|XP_003595259.1| chr0 25838928 25839992 +
2 domain predictions
1 GO term
Lj0g3v0075289.1
n.a. Tir-nbs-lrr resistance protein [Medicago truncatula] gi|357468511|ref|XP_003604540.1| chr0 28529563 28529934 -
2 domain predictions
1 GO term
Lj0g3v0081059.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357494411|ref|XP_003617494.1| chr0 31566547 31568422 -
2 domain predictions
1 GO term
Lj0g3v0081069.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357494411|ref|XP_003617494.1| chr0 31566547 31568422 -
2 domain predictions
1 GO term
Lj0g3v0084449.1
n.a. PREDICTED: probable disease resistance protein At5g66900-like [Glycine max] gi|356565670|ref|XP_003551061.1| chr0 33585007 33588459 -
2 domain predictions
1 GO term
Lj0g3v0087809.1
n.a. NB-LRR type disease resistance protein Rps1-k-2 [Medicago truncatula] gi|357457003|ref|XP_003598782.1| chr0 35782638 35786831 +
2 domain predictions
1 GO term
Lj0g3v0095249.1
n.a. PREDICTED: TMV resistance protein N-like [Cicer arietinum] gi|502156468|ref|XP_004510489.1| chr0 40108382 40114953 -
2 domain predictions
1 GO term
Lj0g3v0097779.1
n.a. TIR-NBS-LRR RCT1-like resistance protein [Medicago sativa] gi|193584702|gb|ACF19651.1| chr0 41362190 41364781 +
2 domain predictions
1 GO term
Lj0g3v0098939.1
n.a. PREDICTED: TMV resistance protein N-like [Cicer arietinum] gi|502156470|ref|XP_004510490.1| chr0 41952250 41955708 +
2 domain predictions
1 GO term
Lj0g3v0100659.1
n.a. PREDICTED: probable disease resistance protein At5g66900-like [Cicer arietinum] gi|502152977|ref|XP_004509177.1| chr0 42563980 42568551 +
2 domain predictions
1 GO term
Lj0g3v0101439.1
n.a. TMV resistance protein N [Medicago truncatula] gi|357509247|ref|XP_003624912.1| chr0 43038093 43048258 -
2 domain predictions
1 GO term
Lj0g3v0101439.3
n.a. TMV resistance protein N [Medicago truncatula] gi|357509247|ref|XP_003624912.1| chr0 43038093 43048258 -
2 domain predictions
1 GO term
Lj0g3v0104929.1
n.a. Disease resistance-like protein [Medicago truncatula] gi|357486939|ref|XP_003613757.1| chr0 44949432 44951846 -
2 domain predictions
1 GO term
Lj0g3v0110329.1
n.a. Heat shock protein [Medicago truncatula] gi|357449951|ref|XP_003595252.1| chr0 47848969 47850215 -
2 domain predictions
1 GO term
Lj0g3v0111179.1
n.a. PREDICTED: probable disease resistance protein At5g66900-like [Glycine max] gi|356565670|ref|XP_003551061.1| chr0 48260570 48265417 -
2 domain predictions
1 GO term
Lj0g3v0111359.1
n.a. TIR; AAA ATPase [Medicago truncatula] gi|124361211|gb|ABN09183.1| chr0 48369929 48374107 +
2 domain predictions
1 GO term
Lj0g3v0111369.1
n.a. TIR; AAA ATPase [Medicago truncatula] gi|124361211|gb|ABN09183.1| chr0 48371573 48372671 +
2 domain predictions
1 GO term
Lj0g3v0111379.1
n.a. n.a. chr0 48372070 48374107 -
2 domain predictions
1 GO term
Lj0g3v0119409.1
n.a. NBS-LRR type disease resistance protein [Medicago truncatula] gi|357458135|ref|XP_003599348.1| chr0 52834088 52835529 +
2 domain predictions
1 GO term
Lj0g3v0120789.1
n.a. TIR; Disease resistance protein [Medicago truncatula] gi|124361215|gb|ABN09187.1| chr0 53731554 53732807 +
2 domain predictions
1 GO term
Lj0g3v0120799.1
n.a. PREDICTED: heat shock cognate 70 kDa protein 2-like isoform 2 [Glycine max] gi|356568994|ref|XP_003552692.1| chr0 53736740 53741385 -
2 domain predictions
1 GO term
Lj0g3v0128709.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356515308|ref|XP_003526343.1| chr0 58173756 58179791 -
2 domain predictions
1 GO term
Lj0g3v0128719.1
n.a. n.a. chr0 58177473 58179794 +
2 domain predictions
1 GO term
Lj0g3v0129119.1
n.a. PREDICTED: disease resistance protein RGA2-like [Glycine max] gi|356570480|ref|XP_003553414.1| chr0 58399609 58400387 +
2 domain predictions
1 GO term
Lj0g3v0131819.1
n.a. NBS resistance protein [Medicago truncatula] gi|357485385|ref|XP_003612980.1| chr0 60074062 60075182 -
2 domain predictions
1 GO term
Lj0g3v0132469.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356497765|ref|XP_003517729.1| chr0 60457324 60461356 -
2 domain predictions
1 GO term
Lj0g3v0132469.2
n.a. n.a. chr0 60457324 60461356 -
2 domain predictions
1 GO term
Lj0g3v0133229.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 60912920 60921656 +
2 domain predictions
1 GO term
Lj0g3v0134919.1
n.a. NB-LRR type disease resistance protein Rps1-k-2 [Glycine max] gi|62632825|gb|AAX89383.1| chr0 61922994 61924317 -
2 domain predictions
1 GO term
Lj0g3v0160139.1
n.a. TIR; AAA ATPase [Medicago truncatula] gi|124361211|gb|ABN09183.1| chr0 75188414 75194567 +
2 domain predictions
1 GO term
Lj0g3v0160389.1
n.a. NBS-LRR disease resistance-like protein [Medicago truncatula] gi|357513683|ref|XP_003627130.1| chr0 75266721 75267043 -
2 domain predictions
1 GO term
Lj0g3v0160399.1
n.a. n.a. chr0 75266721 75267043 -
2 domain predictions
1 GO term
Lj0g3v0162289.1
n.a. TIR-NBS-LRR RCT1-like resistance protein [Medicago sativa] gi|193584702|gb|ACF19651.1| chr0 76512312 76513776 -
2 domain predictions
1 GO term
Lj0g3v0167069.1
n.a. Disease resistance-like protein [Medicago truncatula] gi|357486563|ref|XP_003613569.1| chr0 79417979 79420367 -
2 domain predictions
1 GO term