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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0087809 |
| Transcript ID | Lj0g3v0087809.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | NB-LRR type disease resistance protein Rps1-k-2 [Medicago truncatula] gi|357457003|ref|XP_003598782.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | – | – | |
| PANTHER | 1 | 798 | 798 | 0 | – | |
| Phobius | 1 | 4 | 4 | – | – | |
| PANTHER | 1 | 798 | 798 | 0 | – | |
| Phobius | 5 | 15 | 11 | – | – | |
| Phobius | 16 | 19 | 4 | – | – | |
| Phobius | 20 | 1266 | 1247 | – | – | |
| Coils | 43 | 63 | 21 | – | – | |
| Coils | 70 | 90 | 21 | – | – | |
| SUPERFAMILY | 157 | 431 | 275 | 9.25E-71 | ||
| Gene3D | 174 | 347 | 174 | 5.20E-14 | ||
| Pfam | 195 | 454 | 260 | 1.40E-66 | ||
| PRINTS | 199 | 214 | 16 | 3.40E-20 | – | |
| PRINTS | 271 | 285 | 15 | 3.40E-20 | – | |
| PRINTS | 368 | 382 | 15 | 3.40E-20 | – | |
| SUPERFAMILY | 491 | 703 | 213 | 3.40E-37 | ||
| Gene3D | 517 | 696 | 180 | 6.10E-19 | ||
| PRINTS | 571 | 587 | 17 | 3.40E-20 | – | |
| SUPERFAMILY | 740 | 916 | 177 | 3.40E-37 | ||
| Gene3D | 751 | 820 | 70 | 8.90E-13 | ||
| Gene3D | 869 | 996 | 128 | 8.90E-13 | ||
| SUPERFAMILY | 918 | 1253 | 336 | 1.05E-19 | ||
| Gene3D | 1003 | 1141 | 139 | 1.00E-11 | ||
| PANTHER | 1053 | 1076 | 24 | 0 | – | |
| PANTHER | 1053 | 1076 | 24 | 0 | – | |
| Gene3D | 1177 | 1237 | 61 | 1.00E-11 | ||
| Coils | 1261 | 1266 | 6 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of Lj0g3v0087809.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0087809.1, powered by CORGI.
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