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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002583
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.707s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v0429140.1
n.a. PREDICTED: 30S ribosomal protein S20, chloroplastic-like isoform X2 [Cicer arietinum] gi|502155295|ref|XP_004510023.1| chr3 4239443 4245160 +
7 domain predictions
4 GO terms
Lj3g3v0429150.1
n.a. PREDICTED: 30S ribosomal protein S20, chloroplastic-like isoform X2 [Cicer arietinum] gi|502155295|ref|XP_004510023.1| chr3 4246043 4247193 +
5 domain predictions
4 GO terms
LotjaGi3g1v0045100.1
n.a. 30S ribosomal protein S20; TAIR: AT3G15190.1 chloroplast 30S ribosomal protein S20; Swiss-Prot: sp|Q9ASV6|RR20_ARATH 30S ribosomal protein S20, chloroplastic; TrEMBL-Plants: tr|I3T346|I3T346_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0045100 LjG1.1_chr3 4818892 4825109 +
5 domain predictions
4 GO terms
LotjaGi3g1v0045200.1
n.a. 30S ribosomal protein S20, putative; TAIR: AT3G15190.1 chloroplast 30S ribosomal protein S20; Swiss-Prot: sp|Q9ASV6|RR20_ARATH 30S ribosomal protein S20, chloroplastic; TrEMBL-Plants: tr|I3T346|I3T346_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0045200 LjG1.1_chr3 4825328 4829989 +
4 domain predictions
4 GO terms
LotjaGi3g1v0045200.2
n.a. 30S ribosomal protein S20; TAIR: AT3G15190.1 chloroplast 30S ribosomal protein S20; Swiss-Prot: sp|Q9ASV6|RR20_ARATH 30S ribosomal protein S20, chloroplastic; TrEMBL-Plants: tr|I3T346|I3T346_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0045200 LjG1.1_chr3 4825504 4829989 +
4 domain predictions
4 GO terms
LotjaGi3g1v0045200.3
n.a. 30S ribosomal protein S20, putative; TAIR: AT3G15190.1 chloroplast 30S ribosomal protein S20; Swiss-Prot: sp|Q9ASV6|RR20_ARATH 30S ribosomal protein S20, chloroplastic; TrEMBL-Plants: tr|I3T346|I3T346_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0045200 LjG1.1_chr3 4825504 4829989 +
4 domain predictions
4 GO terms