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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002591
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 16 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.753s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0277739.1
n.a. PREDICTED: GPI ethanolamine phosphate transferase 3-like [Glycine max] gi|356545808|ref|XP_003541326.1| chr0 144170941 144177724 +
2 domain predictions
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Lj0g3v0277739.2
n.a. PREDICTED: GPI ethanolamine phosphate transferase 3-like [Glycine max] gi|356545808|ref|XP_003541326.1| chr0 144170941 144177724 +
2 domain predictions
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Lj0g3v0277739.3
n.a. PREDICTED: GPI ethanolamine phosphate transferase 3-like [Glycine max] gi|356545808|ref|XP_003541326.1| chr0 144170941 144175934 +
2 domain predictions
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Lj2g3v0912050.1
n.a. Ectonucleotide pyrophosphatase/phosphodiesterase family member [Medicago truncatula] gi|357501305|ref|XP_003620941.1| chr2 13994471 13998495 -
2 domain predictions
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Lj2g3v0912060.1
n.a. PREDICTED: ectonucleotide pyrophosphatase/phosphodiesterase family member 3 [Vitis vinifera] gi|225444938|ref|XP_002282308.1| chr2 13996710 14001783 -
2 domain predictions
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Lj2g3v0912060.2
n.a. Ectonucleotide pyrophosphatase/phosphodiesterase family member [Medicago truncatula] gi|357501305|ref|XP_003620941.1| chr2 13996710 14002950 -
2 domain predictions
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Lj2g3v0913110.1
n.a. nucleotide pyrophosphatase-like protein [Spinacia oleracea] gi|12081942|dbj|BAB20681.1| chr2 14034429 14036143 -
2 domain predictions
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Lj4g3v3015220.1
n.a. PREDICTED: ectonucleotide pyrophosphatase/phosphodiesterase family member 1-like [Glycine max] gi|356511413|ref|XP_003524421.1| chr4 40388291 40392262 +
2 domain predictions
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LotjaGi1g1v0604500.1
n.a. GPI ethanolamine phosphate transferase 1; TAIR: AT3G01380.2 sulfatase and phosphatidylinositolglycan class N domain-containing protein; Swiss-Prot: sp|Q2U0S9|MCD4_ASPOR GPI ethanolamine phosphate transferase 1; TrEMBL-Plants: tr|K7K2J4|K7K2J4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0604500 LjG1.1_chr1 114932424 114942826 -
2 domain predictions
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LotjaGi2g1v0125700.1
n.a. GPI ethanolamine phosphate transferase; TAIR: AT5G17250.1 Alkaline-phosphatase-like family protein; Swiss-Prot: sp|Q8TEQ8|PIGO_HUMAN GPI ethanolamine phosphate transferase 3; TrEMBL-Plants: tr|A0A0R0GV98|A0A0R0GV98_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0125700 LjG1.1_chr2 46085060 46092124 -
2 domain predictions
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LotjaGi2g1v0233400.1
n.a. Ectonucleotide pyrophosphatase/phosphodiesterase; TAIR: AT4G29680.1 Alkaline-phosphatase-like family protein; Swiss-Prot: sp|O14638|ENPP3_HUMAN Ectonucleotide pyrophosphatase/phosphodiesterase family member 3; TrEMBL-Plants: tr|G7KJV4|G7KJV4_MEDTR Ectonucleotide pyrophosphatase/phosphodiesterase; Found in the gene: LotjaGi2g1v0233400 LjG1.1_chr2 69223540 69227981 -
2 domain predictions
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LotjaGi2g1v0233500_LC.1
n.a. Ectonucleotide pyrophosphatase/phosphodiesterase; TAIR: AT4G29680.1 Alkaline-phosphatase-like family protein; Swiss-Prot: sp|J3SEZ3|PDE1_CROAD Venom phosphodiesterase 1; TrEMBL-Plants: tr|A0A1J7GU48|A0A1J7GU48_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0233500_LC LjG1.1_chr2 69229497 69231730 -
2 domain predictions
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LotjaGi2g1v0233600.1
n.a. Ectonucleotide pyrophosphatase/phosphodiesterase; TAIR: AT4G29680.1 Alkaline-phosphatase-like family protein; Swiss-Prot: sp|J3SEZ3|PDE1_CROAD Venom phosphodiesterase 1; TrEMBL-Plants: tr|A0A1J7GU48|A0A1J7GU48_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0233600 LjG1.1_chr2 69276324 69278301 -
2 domain predictions
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LotjaGi2g1v0326900.2
n.a. GPI ethanolamine phosphate transferase 2; TAIR: AT2G22530.1 Alkaline-phosphatase-like family protein; Swiss-Prot: sp|Q8TGB2|GPI7_CANAL GPI ethanolamine phosphate transferase 2; TrEMBL-Plants: tr|I1J516|I1J516_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0326900 LjG1.1_chr2 80222202 80230012 -
2 domain predictions
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LotjaGi4g1v0317600.1
n.a. GPI ethanolamine phosphate transferase; TAIR: AT5G17250.1 Alkaline-phosphatase-like family protein; Swiss-Prot: sp|Q8TEQ8|PIGO_HUMAN GPI ethanolamine phosphate transferase 3; TrEMBL-Plants: tr|A0A0R0GV98|A0A0R0GV98_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0317600 LjG1.1_chr4 69513825 69521006 -
2 domain predictions
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LotjaGi4g1v0440700.1
n.a. Ectonucleotide pyrophosphatase/phosphodiesterase; TAIR: AT4G29680.1 Alkaline-phosphatase-like family protein; Swiss-Prot: sp|J3SEZ3|PDE1_CROAD Venom phosphodiesterase 1; TrEMBL-Plants: tr|V7CTL4|V7CTL4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0440700 LjG1.1_chr4 81418431 81426505 +
2 domain predictions
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