Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR003527
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 51 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.596s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0271689.1
n.a. PREDICTED: mitogen-activated protein kinase 10-like [Glycine max] gi|356567418|ref|XP_003551917.1| chr0 140778661 140784928 +
2 domain predictions
3 GO terms
Lj0g3v0316449.1
n.a. MAP kinase [Gossypium raimondii] gi|183584854|gb|ACC63895.1| chr0 165252764 165258884 +
2 domain predictions
3 GO terms
Lj0g3v0316449.2
n.a. PREDICTED: mitogen-activated protein kinase 19-like [Cicer arietinum] gi|502166793|ref|XP_004513982.1| chr0 165252764 165258884 +
2 domain predictions
3 GO terms
Lj0g3v0322829.1
n.a. MAP kinase PsMAPK2 [Pisum sativum] gi|8132347|gb|AAF73257.1|AF154329_1 chr0 168593464 168596583 -
2 domain predictions
3 GO terms
Lj0g3v0325839.3
n.a. PREDICTED: mitogen-activated protein kinase 9-like [Cicer arietinum] gi|502163102|ref|XP_004512727.1| chr0 170293698 170297472 -
2 domain predictions
3 GO terms
Lj1g3v2742300.1
n.a. MAP kinase 4 [Theobroma cacao] gi|508703991|gb|EOX95887.1| chr1 31546791 31554729 -
2 domain predictions
3 GO terms
Lj2g3v0690050.1
n.a. PREDICTED: mitogen-activated protein kinase 9-like isoform X1 [Cicer arietinum] gi|502138122|ref|XP_004503294.1| chr2 10901393 10905680 +
2 domain predictions
3 GO terms
Lj2g3v3107350.1
n.a. PREDICTED: mitogen-activated protein kinase 10-like [Glycine max] gi|356567418|ref|XP_003551917.1| chr2 40062140 40068060 +
2 domain predictions
3 GO terms
Lj2g3v3107350.2
n.a. PREDICTED: mitogen-activated protein kinase 10-like [Glycine max] gi|356567418|ref|XP_003551917.1| chr2 40062140 40068060 +
2 domain predictions
3 GO terms
Lj4g3v0510090.1
n.a. mitogen-activated protein kinase 2 [Glycine max] gi|351721680|ref|NP_001235426.1| chr4 8614327 8626782 -
2 domain predictions
3 GO terms
Lj4g3v0510120.1
n.a. PREDICTED: mitogen-activated protein kinase 7-like [Glycine max] gi|356528316|ref|XP_003532750.1| chr4 8635926 8637361 +
2 domain predictions
3 GO terms
Lj4g3v2604390.1
n.a. PREDICTED: mitogen-activated protein kinase 7-like [Glycine max] gi|356528316|ref|XP_003532750.1| chr4 35179899 35183086 +
2 domain predictions
3 GO terms
Lj4g3v2604390.2
n.a. PREDICTED: mitogen-activated protein kinase 7-like [Glycine max] gi|356528316|ref|XP_003532750.1| chr4 35180953 35183086 +
2 domain predictions
3 GO terms
Lj4g3v2989020.1
n.a. PREDICTED: mitogen-activated protein kinase homolog MMK2-like isoform X1 [Cicer arietinum] gi|502139204|ref|XP_004503681.1| chr4 39470235 39476169 -
2 domain predictions
3 GO terms
Lj4g3v2989020.2
n.a. PREDICTED: mitogen-activated protein kinase homolog MMK2-like isoform X1 [Cicer arietinum] gi|502139204|ref|XP_004503681.1| chr4 39470235 39476211 -
2 domain predictions
3 GO terms
Lj4g3v3114640.1
n.a. PREDICTED: mitogen-activated protein kinase 9-like isoform X1 [Cicer arietinum] gi|502138122|ref|XP_004503294.1| chr4 42038846 42043280 -
2 domain predictions
3 GO terms
Lj6g3v1887730.1
n.a. Mitogen-activated protein kinase 16 isoform 3 [Theobroma cacao] gi|508713603|gb|EOY05500.1| chr6 20937210 20942856 +
2 domain predictions
3 GO terms
Lj6g3v1887730.2
n.a. PREDICTED: mitogen-activated protein kinase 16-like [Cicer arietinum] gi|502078972|ref|XP_004486112.1| chr6 20937210 20941514 +
2 domain predictions
3 GO terms
LotjaGi1g1v0041300.1
n.a. Mitogen-activated protein kinase; TAIR: AT2G42880.1 MAP kinase 20; Swiss-Prot: sp|Q5ZCI1|MPK10_ORYSJ Mitogen-activated protein kinase 10; TrEMBL-Plants: tr|I1N0W7|I1N0W7_SOYBN Mitogen-activated protein kinase; Found in the gene: LotjaGi1g1v0041300 LjG1.1_chr1 5679210 5685769 -
2 domain predictions
3 GO terms
LotjaGi1g1v0422300.1
n.a. Mitogen-activated protein kinase; TAIR: AT1G10210.1 mitogen-activated protein kinase 1; Swiss-Prot: sp|Q40517|NTF3_TOBAC Mitogen-activated protein kinase homolog NTF3; TrEMBL-Plants: tr|I3SBX5|I3SBX5_LOTJA Mitogen-activated protein kinase; Found in the gene: LotjaGi1g1v0422300 LjG1.1_chr1 91655601 91659002 +
2 domain predictions
3 GO terms
LotjaGi1g1v0422300.4
n.a. Mitogen-activated protein kinase; TAIR: AT1G10210.1 mitogen-activated protein kinase 1; Swiss-Prot: sp|Q40517|NTF3_TOBAC Mitogen-activated protein kinase homolog NTF3; TrEMBL-Plants: tr|I3SBX5|I3SBX5_LOTJA Mitogen-activated protein kinase; Found in the gene: LotjaGi1g1v0422300 LjG1.1_chr1 91656438 91658127 +
2 domain predictions
3 GO terms
LotjaGi1g1v0422300.5
n.a. Mitogen-activated protein kinase; TAIR: AT1G10210.1 mitogen-activated protein kinase 1; Swiss-Prot: sp|Q40517|NTF3_TOBAC Mitogen-activated protein kinase homolog NTF3; TrEMBL-Plants: tr|I3SBX5|I3SBX5_LOTJA Mitogen-activated protein kinase; Found in the gene: LotjaGi1g1v0422300 LjG1.1_chr1 91656438 91658187 +
2 domain predictions
3 GO terms
LotjaGi1g1v0480100.1
n.a. Mitogen-activated protein kinase; TAIR: AT4G01370.1 MAP kinase 4; Swiss-Prot: sp|Q40353|MMK2_MEDSA Mitogen-activated protein kinase homolog MMK2; TrEMBL-Plants: tr|I1N3U0|I1N3U0_SOYBN Mitogen-activated protein kinase; Found in the gene: LotjaGi1g1v0480100 LjG1.1_chr1 99222327 99231178 -
2 domain predictions
3 GO terms
LotjaGi1g1v0480100.4
n.a. Mitogen-activated protein kinase; TAIR: AT4G01370.1 MAP kinase 4; Swiss-Prot: sp|Q39024|MPK4_ARATH Mitogen-activated protein kinase 4; TrEMBL-Plants: tr|I1N3U0|I1N3U0_SOYBN Mitogen-activated protein kinase; Found in the gene: LotjaGi1g1v0480100 LjG1.1_chr1 99224762 99230652 -
2 domain predictions
3 GO terms
LotjaGi1g1v0480100.5
n.a. Mitogen-activated protein kinase; TAIR: AT4G01370.1 MAP kinase 4; Swiss-Prot: sp|Q39024|MPK4_ARATH Mitogen-activated protein kinase 4; TrEMBL-Plants: tr|I1N3U0|I1N3U0_SOYBN Mitogen-activated protein kinase; Found in the gene: LotjaGi1g1v0480100 LjG1.1_chr1 99224770 99230652 -
2 domain predictions
3 GO terms
LotjaGi2g1v0198600.1
n.a. Mitogen-activated protein kinase; TAIR: AT3G18040.4 MAP kinase 9; Swiss-Prot: sp|Q9LV37|MPK9_ARATH Mitogen-activated protein kinase 9; TrEMBL-Plants: tr|A0A072UM65|A0A072UM65_MEDTR Mitogen-activated protein kinase; Found in the gene: LotjaGi2g1v0198600 LjG1.1_chr2 63364442 63372971 +
2 domain predictions
3 GO terms
LotjaGi2g1v0364800.1
n.a. Mitogen-activated protein kinase; TAIR: AT3G45640.1 mitogen-activated protein kinase 3; Swiss-Prot: sp|Q39023|MPK3_ARATH Mitogen-activated protein kinase 3; TrEMBL-Plants: tr|I1LR10|I1LR10_SOYBN Mitogen-activated protein kinase; Found in the gene: LotjaGi2g1v0364800 LjG1.1_chr2 86223325 86227465 -
2 domain predictions
3 GO terms
LotjaGi2g1v0364800.2
n.a. Mitogen-activated protein kinase; TAIR: AT3G45640.1 mitogen-activated protein kinase 3; Swiss-Prot: sp|Q39023|MPK3_ARATH Mitogen-activated protein kinase 3; TrEMBL-Plants: tr|I1LR10|I1LR10_SOYBN Mitogen-activated protein kinase; Found in the gene: LotjaGi2g1v0364800 LjG1.1_chr2 86224399 86227074 -
2 domain predictions
3 GO terms
LotjaGi2g1v0365400.1
n.a. Mitogen-activated protein kinase; TAIR: AT1G07880.2 Protein kinase superfamily protein; Swiss-Prot: sp|Q40531|NTF6_TOBAC Mitogen-activated protein kinase homolog NTF6; TrEMBL-Plants: tr|A0A1J7HQ83|A0A1J7HQ83_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0365400 LjG1.1_chr2 86302468 86306859 +
2 domain predictions
3 GO terms
LotjaGi2g1v0435900.1
n.a. Mitogen-activated protein kinase; TAIR: AT4G01370.1 MAP kinase 4; Swiss-Prot: sp|Q40353|MMK2_MEDSA Mitogen-activated protein kinase homolog MMK2; TrEMBL-Plants: tr|C6TG52|C6TG52_SOYBN Mitogen-activated protein kinase; Found in the gene: LotjaGi2g1v0435900 LjG1.1_chr2 93250259 93253119 -
2 domain predictions
3 GO terms
LotjaGi3g1v0038600.1
n.a. Mitogen-activated protein kinase; TAIR: AT1G53510.1 mitogen-activated protein kinase 18; Swiss-Prot: sp|Q9C5C0|MPK18_ARATH Mitogen-activated protein kinase 18; TrEMBL-Plants: tr|A0A072TQJ8|A0A072TQJ8_MEDTR Mitogen-activated protein kinase; Found in the gene: LotjaGi3g1v0038600 LjG1.1_chr3 4162733 4169921 +
2 domain predictions
3 GO terms
LotjaGi4g1v0067400.1
n.a. Mitogen-activated protein kinase; TAIR: AT2G43790.1 MAP kinase 6; Swiss-Prot: sp|Q07176|MMK1_MEDSA Mitogen-activated protein kinase homolog MMK1; TrEMBL-Plants: tr|A0A0A7CJ31|A0A0A7CJ31_VIGMU Mitogen-activated protein kinase; Found in the gene: LotjaGi4g1v0067400 LjG1.1_chr4 8426328 8456362 -
2 domain predictions
3 GO terms
LotjaGi4g1v0067400.3
n.a. Mitogen-activated protein kinase; TAIR: AT2G43790.1 MAP kinase 6; Swiss-Prot: sp|Q07176|MMK1_MEDSA Mitogen-activated protein kinase homolog MMK1; TrEMBL-Plants: tr|A0A0A7CJ31|A0A0A7CJ31_VIGMU Mitogen-activated protein kinase; Found in the gene: LotjaGi4g1v0067400 LjG1.1_chr4 8443888 8455955 -
2 domain predictions
3 GO terms
LotjaGi4g1v0067400.5
n.a. Mitogen-activated protein kinase; TAIR: AT2G43790.1 MAP kinase 6; Swiss-Prot: sp|Q07176|MMK1_MEDSA Mitogen-activated protein kinase homolog MMK1; TrEMBL-Plants: tr|A0A0A7CJ31|A0A0A7CJ31_VIGMU Mitogen-activated protein kinase; Found in the gene: LotjaGi4g1v0067400 LjG1.1_chr4 8443888 8456173 -
2 domain predictions
3 GO terms
LotjaGi4g1v0178000.2
n.a. Mitogen-activated protein kinase; TAIR: AT1G10210.1 mitogen-activated protein kinase 1; Swiss-Prot: sp|Q40517|NTF3_TOBAC Mitogen-activated protein kinase homolog NTF3; TrEMBL-Plants: tr|I3SBX5|I3SBX5_LOTJA Mitogen-activated protein kinase; Found in the gene: LotjaGi4g1v0178000 LjG1.1_chr4 36364193 36370921 -
2 domain predictions
3 GO terms
LotjaGi4g1v0350100.1
n.a. Mitogen-activated protein kinase; TAIR: AT5G19010.1 mitogen-activated protein kinase 16; Swiss-Prot: sp|Q8W4J2|MPK16_ARATH Mitogen-activated protein kinase 16; TrEMBL-Plants: tr|K7L3U2|K7L3U2_SOYBN Mitogen-activated protein kinase; Found in the gene: LotjaGi4g1v0350100 LjG1.1_chr4 72896006 72901403 -
2 domain predictions
3 GO terms
LotjaGi4g1v0376800.1
n.a. Mitogen-activated protein kinase; TAIR: AT2G18170.1 MAP kinase 7; Swiss-Prot: sp|Q39027|MPK7_ARATH Mitogen-activated protein kinase 7; TrEMBL-Plants: tr|V7CMQ5|V7CMQ5_PHAVU Mitogen-activated protein kinase; Found in the gene: LotjaGi4g1v0376800 LjG1.1_chr4 75585103 75588848 +
2 domain predictions
3 GO terms
LotjaGi4g1v0376800.2
n.a. Mitogen-activated protein kinase; TAIR: AT2G18170.1 MAP kinase 7; Swiss-Prot: sp|Q39027|MPK7_ARATH Mitogen-activated protein kinase 7; TrEMBL-Plants: tr|V7CMQ5|V7CMQ5_PHAVU Mitogen-activated protein kinase; Found in the gene: LotjaGi4g1v0376800 LjG1.1_chr4 75585103 75588848 +
2 domain predictions
3 GO terms
LotjaGi4g1v0376800.3
n.a. Mitogen-activated protein kinase; TAIR: AT2G18170.1 MAP kinase 7; Swiss-Prot: sp|Q39027|MPK7_ARATH Mitogen-activated protein kinase 7; TrEMBL-Plants: tr|V7CMQ5|V7CMQ5_PHAVU Mitogen-activated protein kinase; Found in the gene: LotjaGi4g1v0376800 LjG1.1_chr4 75585345 75588815 +
2 domain predictions
3 GO terms
LotjaGi4g1v0376800.4
n.a. Mitogen-activated protein kinase; TAIR: AT2G18170.1 MAP kinase 7; Swiss-Prot: sp|Q39027|MPK7_ARATH Mitogen-activated protein kinase 7; TrEMBL-Plants: tr|V7CMQ5|V7CMQ5_PHAVU Mitogen-activated protein kinase; Found in the gene: LotjaGi4g1v0376800 LjG1.1_chr4 75585621 75588752 +
2 domain predictions
3 GO terms
LotjaGi4g1v0376800.5
n.a. Mitogen-activated protein kinase; TAIR: AT2G18170.1 MAP kinase 7; Swiss-Prot: sp|Q39027|MPK7_ARATH Mitogen-activated protein kinase 7; TrEMBL-Plants: tr|V7CMQ5|V7CMQ5_PHAVU Mitogen-activated protein kinase; Found in the gene: LotjaGi4g1v0376800 LjG1.1_chr4 75586540 75588450 +
2 domain predictions
3 GO terms
LotjaGi4g1v0376800.6
n.a. Mitogen-activated protein kinase; TAIR: AT2G18170.1 MAP kinase 7; Swiss-Prot: sp|Q39027|MPK7_ARATH Mitogen-activated protein kinase 7; TrEMBL-Plants: tr|V7CMQ5|V7CMQ5_PHAVU Mitogen-activated protein kinase; Found in the gene: LotjaGi4g1v0376800 LjG1.1_chr4 75586840 75588450 +
2 domain predictions
3 GO terms
LotjaGi4g1v0429600.1
n.a. Mitogen-activated protein kinase; TAIR: AT4G01370.1 MAP kinase 4; Swiss-Prot: sp|Q39024|MPK4_ARATH Mitogen-activated protein kinase 4; TrEMBL-Plants: tr|A0A072U5I3|A0A072U5I3_MEDTR Mitogen-activated protein kinase; Found in the gene: LotjaGi4g1v0429600 LjG1.1_chr4 80375823 80387844 -
2 domain predictions
3 GO terms
LotjaGi4g1v0463200.1
n.a. Mitogen-activated protein kinase; TAIR: AT3G18040.4 MAP kinase 9; Swiss-Prot: sp|Q5Z9J0|MPK12_ORYSJ Mitogen-activated protein kinase 12; TrEMBL-Plants: tr|I1KQJ1|I1KQJ1_SOYBN Mitogen-activated protein kinase; Found in the gene: LotjaGi4g1v0463200 LjG1.1_chr4 83320764 83326926 -
2 domain predictions
3 GO terms
LotjaGi6g1v0169400.1
n.a. Mitogen-activated protein kinase; TAIR: AT2G42880.1 MAP kinase 20; Swiss-Prot: sp|Q9SJG9|MPK20_ARATH Mitogen-activated protein kinase 20; TrEMBL-Plants: tr|I1N0W7|I1N0W7_SOYBN Mitogen-activated protein kinase; Found in the gene: LotjaGi6g1v0169400 LjG1.1_chr6 45497738 45504597 +
2 domain predictions
3 GO terms
LotjaGi6g1v0169400.2
n.a. Mitogen-activated protein kinase; TAIR: AT2G42880.1 MAP kinase 20; Swiss-Prot: sp|Q5ZCI1|MPK10_ORYSJ Mitogen-activated protein kinase 10; TrEMBL-Plants: tr|A0A151RBN8|A0A151RBN8_CAJCA Mitogen-activated protein kinase; Found in the gene: LotjaGi6g1v0169400 LjG1.1_chr6 45499309 45502275 +
2 domain predictions
3 GO terms
LotjaGi6g1v0169400.3
n.a. Mitogen-activated protein kinase; TAIR: AT2G42880.1 MAP kinase 20; Swiss-Prot: sp|Q9SJG9|MPK20_ARATH Mitogen-activated protein kinase 20; TrEMBL-Plants: tr|I1N0W7|I1N0W7_SOYBN Mitogen-activated protein kinase; Found in the gene: LotjaGi6g1v0169400 LjG1.1_chr6 45499538 45503781 +
2 domain predictions
3 GO terms
LotjaGi6g1v0300200.1
n.a. Mitogen-activated protein kinase; TAIR: AT5G19010.1 mitogen-activated protein kinase 16; Swiss-Prot: sp|Q8W4J2|MPK16_ARATH Mitogen-activated protein kinase 16; TrEMBL-Plants: tr|V7BRY6|V7BRY6_PHAVU Mitogen-activated protein kinase; Found in the gene: LotjaGi6g1v0300200 LjG1.1_chr6 61791054 61797762 +
2 domain predictions
3 GO terms
LotjaGi6g1v0300200.2
n.a. Mitogen-activated protein kinase; TAIR: AT5G19010.1 mitogen-activated protein kinase 16; Swiss-Prot: sp|Q8W4J2|MPK16_ARATH Mitogen-activated protein kinase 16; TrEMBL-Plants: tr|V7BRY6|V7BRY6_PHAVU Mitogen-activated protein kinase; Found in the gene: LotjaGi6g1v0300200 LjG1.1_chr6 61792535 61796598 +
2 domain predictions
3 GO terms
LotjaGi6g1v0300200.3
n.a. Mitogen-activated protein kinase; TAIR: AT5G19010.1 mitogen-activated protein kinase 16; Swiss-Prot: sp|Q8W4J2|MPK16_ARATH Mitogen-activated protein kinase 16; TrEMBL-Plants: tr|V7BRY6|V7BRY6_PHAVU Mitogen-activated protein kinase; Found in the gene: LotjaGi6g1v0300200 LjG1.1_chr6 61792597 61796598 +
2 domain predictions
3 GO terms