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Field | Value |
---|---|
Gene ID | LotjaGi6g1v0169400 |
Transcript ID | LotjaGi6g1v0169400.2 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Mitogen-activated protein kinase; TAIR: AT2G42880.1 MAP kinase 20; Swiss-Prot: sp|Q5ZCI1|MPK10_ORYSJ Mitogen-activated protein kinase 10; TrEMBL-Plants: tr|A0A151RBN8|A0A151RBN8_CAJCA Mitogen-activated protein kinase; Found in the gene: LotjaGi6g1v0169400 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:45499309..45502275) extracted from Lotus japonicus Gifu genome v1.2.
GAATTTATGCAAACACACAAATTTGGATTATGTCTATTAATTGTATATTTGTATTGATGAGTTCAGATTTCTGGAATATA TAATTGTGAATTTTCTTTTCTGTAAGACAGAAAATTACATTTTATTTAATTTCTATTCACACTGAGAATTTCTTTTAGTT GTTCTTTTAGGCTGATTTTTGGATGTCTATTGGCTTCCTGTTTTGTACTTGCCTGATTTTTCTATGTGGAATAACTTTAT GTCTCTACTGCAGAGTTCAACAGAGATGGACTTTTTCTCTGAATATGGTGATGCCAACCGGTACAAAATTCAAGAAGTCA TAGGAAAAGGAAGTTATGGTGTTGTCTGTTCAGCGATTGACACTCACACTGGTGAAAAAGTGGCAATTAAAAAGATTCAT GACATCTTCGAACATATTTCTGATGCTGCACGTATTCTCCGTGAGATAAAGCTGCTTAGACTCCTGCGACATCCCGATAT TGTTGAAATAAAGCACATTATGCTTCCTCCTTCTCGGAAGGACTTCAAAGATATTTATGTTGTTTTTGAGCTCATGGAGT CGGATCTTCATCAAGTCATTAAAGCAAATGATGACTTAACAAAAGAGCACTATCAGTTTTTCCTCTATCAATTACTTCGA GCTTTGAAGTATATTCACACCGGTAATCGTCAATATTTTGTTGTTACTGTTGTGTAAGAATGTATACACATGCTTGGCTA ATGGCTATAACTTGTATTTTTTACTTACATGAGTTAGAATGTGAAACTGAATAATTTCTCATCATTCCTCTCAATGAAGA TATCAGGATTGTGCACATTATCATATTTAAATGTTGCTTTTGTTTTCATTTTTTTTTTCACTTCACCACTTGATGCTCTT AAAATTGCACACTTTGTCATAATATTCCCCCCTTCCTATGCCCTTTTTTTATTTTTTTCCTTTTCTATTTCTTAATGAGT GTGCTGGCAATGGCATTGATGTCAATTATGCTTATCTAATTCTTAGCTATACAATGCAGCAAATGTCTATCATCGAGATT TGAAGCCAAAAAATATACTGGCTAATGCAAACTGCAAACTCAAAATTTGTGATTTTGGGTTAGCTAGAGTTGCCTTCAGT GACACCCCAACAACTATATTTTGGACGGTATTCCCTCTAAAATTTCCATTATCTGTACCCTTTCTACTTTTTTGTTTTAT CAGCTCTGCATGTTGTGTTGCTGTTGTTTATTTTTATTTGTTTCAATATTTCTCATATCTTTTGGGAAGGTACGGACTGA TGTTTATCGCTGGTTTAATGCTTGCGTCTGCAGGATTATGTTGCGACAAGGTGGTATAGAGCTCCCGAGCTATGTGGATC ATTTTACTCTAAGGTATGCTTTTTTTCCCAGATTATTTTGAATATTGTAAAAGTGAGAGACAGCTCATATATGCATAATC TTGGCTTACCACACATTAATTTTTATTTTACTCGTGAAACACCTATTATGTTATCTTCTTTTCCCTCAATCATCCATCAG ACCTAAAACTGGAGACCATTACGTTGTTTTTATTAATCTACTATATTATATGTTTCTCTTAATTTTGTTTGTACCATTGA ACTGACTGTTAAGAAGGGTAGACTATTGGGGAGTCAAGACTAGTAGGGGTATAGAAAGGAGATATTTCTCAAATTTGTCA GTGTAAAATTGAAGGTAGATTGGCTGTAATGCTGTGGCGTTGTTAAGATTGAAGGTGTATTATGCATGTACTGGCTATAG TTAAATAGTTCATAGCAAACTCAATTTCATATTCTATTTGGTTGCAAACAGACACGTAATGCTGTGAGTTTTGAGATTCA CTTTTTGTAGTTGTAATTTTCTAATGTAAATTTTGATGCAGTATACACCAGCGATTGATGTATGGAGTATAGGTTGCATC TTTGCTGAAGTACTAGCAGGAAAGCCGCTTTTTCCTGGAAAAAATGTAGTCCATCAGTTGGATCTGATGACAGATCTGCT TGGGACTCCCTCACTGGATACTATATCACGGGTAAACAGCTTGTGACAAACCACTTCTTTTGCTTAGCTTAGTTGTGAAC CAAAAGTTAACAGCTTGTGATAATTTATGCAGGTTCGCAATGAGAAGGCAAGGAGATACCTAACTAGCATGAGGAAAAAG CAACCTGTGCCGTTTGCACAAAAATTTTCTAATGCAGACCCTTTAGCACTACGACTGTTGGAAAGGTTACTGGCTTTTGA TCCGAAAGACCGGCCCACTGCTGAAGAGGTTTGTTACATTGTGCTCAATTGCTTTCATGTGTTCACAGAAATGTATTTTA GTTGTGTCCTCGACTACTTCTTTAGCTTATCTCTCATTTGAGCATTAAAAAGCATAATGAATCATAAGCGGGATAGCTAT ATATAATAGTGTTTTGAATTCTTGCTCAAGAATCTTAAATGTTTTGGTGTCCTCCAGGCACTAGCTGATCCCTACTTCAA GGGACTAGCAAAAGTTGAGAGGGAACCATCCTGCCAGCCTATTTCGAAAATGGAGTTTGAATTCGAAAGACGGAGAGTCA CGAAGGAAGAAATTCGAGAGCTAATTTTCCGTGAGATTCTTGAGTATCATCCACAACTATTGAAAGACTATATGAATGGA ACAGAGAGAACTAACTTTCTTTATCCAAGGTTTTTCAATTTCTTAATAGCTTTTCAACTGTCTATGCCACTTTATTTTTT TTGTTCCCTTGATGATTTTCAATTCAGATTTTCAACTTTATCATTTTCTCATGCCTTATTCTGGGGCAATACTTTGCAGT GCTGTTGATCAATTCAGAAAGCAGTTTGCTCATCTAGAGGAAAATGGTAAAAGTGGGCCTGTTATGCCACTTGATAGAAA GCATGTTTCTCTTCCAAGGTAATTCTGATCCATAAAAAAATCAGCGTATCATTTCATTCATTTTTCTTTGTTGCATTTCA ATTGTAG
CDS sequence (LotjaGi6g1v0169400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACTTTTTCTCTGAATATGGTGATGCCAACCGGTACAAAATTCAAGAAGTCATAGGAAAAGGAAGTTATGGTGTTGT CTGTTCAGCGATTGACACTCACACTGGTGAAAAAGTGGCAATTAAAAAGATTCATGACATCTTCGAACATATTTCTGATG CTGCACGTATTCTCCGTGAGATAAAGCTGCTTAGACTCCTGCGACATCCCGATATTGTTGAAATAAAGCACATTATGCTT CCTCCTTCTCGGAAGGACTTCAAAGATATTTATGTTGTTTTTGAGCTCATGGAGTCGGATCTTCATCAAGTCATTAAAGC AAATGATGACTTAACAAAAGAGCACTATCAGTTTTTCCTCTATCAATTACTTCGAGCTTTGAAGTATATTCACACCGCAA ATGTCTATCATCGAGATTTGAAGCCAAAAAATATACTGGCTAATGCAAACTGCAAACTCAAAATTTGTGATTTTGGGTTA GCTAGAGTTGCCTTCAGTGACACCCCAACAACTATATTTTGGACGGATTATGTTGCGACAAGGTGGTATAGAGCTCCCGA GCTATGTGGATCATTTTACTCTAAGTATACACCAGCGATTGATGTATGGAGTATAGGTTGCATCTTTGCTGAAGTACTAG CAGGAAAGCCGCTTTTTCCTGGAAAAAATGTAGTCCATCAGTTGGATCTGATGACAGATCTGCTTGGGACTCCCTCACTG GATACTATATCACGGGTTCGCAATGAGAAGGCAAGGAGATACCTAACTAGCATGAGGAAAAAGCAACCTGTGCCGTTTGC ACAAAAATTTTCTAATGCAGACCCTTTAGCACTACGACTGTTGGAAAGGTTACTGGCTTTTGATCCGAAAGACCGGCCCA CTGCTGAAGAGGCACTAGCTGATCCCTACTTCAAGGGACTAGCAAAAGTTGAGAGGGAACCATCCTGCCAGCCTATTTCG AAAATGGAGTTTGAATTCGAAAGACGGAGAGTCACGAAGGAAGAAATTCGAGAGCTAATTTTCCGTGAGATTCTTGAGTA TCATCCACAACTATTGAAAGACTATATGAATGGAACAGAGAGAACTAACTTTCTTTATCCAAGTGCTGTTGATCAATTCA GAAAGCAGTTTGCTCATCTAGAGGAAAATGGTAAAAGTGGGCCTGTTATGCCACTTGATAGAAAGCATGTTTCTCTTCCA AGGTAA
Protein sequence (LotjaGi6g1v0169400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDFFSEYGDANRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIML PPSRKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGL ARVAFSDTPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDVWSIGCIFAEVLAGKPLFPGKNVVHQLDLMTDLLGTPSL DTISRVRNEKARRYLTSMRKKQPVPFAQKFSNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPIS KMEFEFERRRVTKEEIRELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGKSGPVMPLDRKHVSLP R
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 361 | 361 | 2.2E-262 | – | |
PANTHER | 1 | 361 | 361 | 2.2E-262 | – | |
SUPERFAMILY | 9 | 308 | 300 | 4.45E-94 | ||
CDD | 12 | 349 | 338 | 0.0 | – | |
Gene3D | 12 | 348 | 337 | 1.3E-146 | – | |
ProSiteProfiles | 13 | 304 | 292 | 45.502 | ||
Pfam | 13 | 304 | 292 | 3.9E-68 | ||
SMART | 13 | 304 | 292 | 2.5E-94 | ||
ProSitePatterns | 19 | 43 | 25 | - | ||
ProSitePatterns | 48 | 151 | 104 | - | ||
Gene3D | 99 | 333 | 235 | 1.3E-146 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | MAP kinase activity | Catalysis of the reaction: protein + ATP = protein phosphate + ADP. This reaction is the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0169400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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