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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR004447
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.824s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0228219.1
n.a. PREDICTED: carboxyl-terminal-processing protease-like [Glycine max] gi|356534629|ref|XP_003535855.1| chr0 117954083 117959780 +
2 domain predictions
2 GO terms
Lj4g3v2631020.1
n.a. Carboxyl-terminal-processing protease [Medicago truncatula] gi|357519225|ref|XP_003629901.1| chr4 35913233 35919419 -
2 domain predictions
2 GO terms
LotjaGi4g1v0384000.2
n.a. Carboxyl-terminal-processing protease; TAIR: AT5G46390.2 Peptidase S41 family protein; Swiss-Prot: sp|F4KHG6|CTPA1_ARATH Carboxyl-terminal-processing peptidase 1, chloroplastic; TrEMBL-Plants: tr|G7L820|G7L820_MEDTR Carboxy-terminal processing peptidase-like protein; Found in the gene: LotjaGi4g1v0384000 LjG1.1_chr4 76254068 76261338 -
3 domain predictions
2 GO terms
LotjaGi5g1v0147300.1
n.a. Carboxyl-terminal-processing protease; TAIR: AT3G57680.1 Peptidase S41 family protein; Swiss-Prot: sp|F4J3G5|CTPA3_ARATH Carboxyl-terminal-processing peptidase 3, chloroplastic; TrEMBL-Plants: tr|A0A0L9TVD7|A0A0L9TVD7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0147300 LjG1.1_chr5 37621848 37629129 -
3 domain predictions
2 GO terms
LotjaGi5g1v0147300.2
n.a. Carboxyl-terminal-processing protease; TAIR: AT3G57680.1 Peptidase S41 family protein; Swiss-Prot: sp|F4J3G5|CTPA3_ARATH Carboxyl-terminal-processing peptidase 3, chloroplastic; TrEMBL-Plants: tr|A0A072VIA3|A0A072VIA3_MEDTR Carboxy-terminal processing peptidase-like protein; Found in the gene: LotjaGi5g1v0147300 LjG1.1_chr5 37623176 37627274 -
3 domain predictions
2 GO terms
LotjaGi5g1v0147300.3
n.a. Carboxyl-terminal-processing protease; TAIR: AT3G57680.1 Peptidase S41 family protein; Swiss-Prot: sp|F4J3G5|CTPA3_ARATH Carboxyl-terminal-processing peptidase 3, chloroplastic; TrEMBL-Plants: tr|A0A072VIA3|A0A072VIA3_MEDTR Carboxy-terminal processing peptidase-like protein; Found in the gene: LotjaGi5g1v0147300 LjG1.1_chr5 37623176 37627961 -
3 domain predictions
2 GO terms
LotjaGi5g1v0162100.1
n.a. Carboxyl-terminal-processing protease; TAIR: AT4G17740.1 Peptidase S41 family protein; Swiss-Prot: sp|O23614|CTPA2_ARATH Carboxyl-terminal-processing peptidase 2, chloroplastic; TrEMBL-Plants: tr|A0A151T111|A0A151T111_CAJCA Carboxyl-terminal-processing protease; Found in the gene: LotjaGi5g1v0162100 LjG1.1_chr5 41625317 41638144 -
3 domain predictions
2 GO terms