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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR005170
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.577s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0120309.1
n.a. PREDICTED: DUF21 domain-containing protein At1g55930, chloroplastic-like [Glycine max] gi|356553522|ref|XP_003545104.1| chr0 53447718 53449093 -
3 domain predictions
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LotjaGi1g1v0019100.1
n.a. DUF21 domain-containing protein; TAIR: AT1G55930.1 CBS domain-containing protein / transporter associated domain-containing protein; Swiss-Prot: sp|Q84R21|Y1559_ARATH DUF21 domain-containing protein At1g55930, chloroplastic; TrEMBL-Plants: tr|I1M6I6|I1M6I6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0019100 LjG1.1_chr1 2370570 2381626 +
3 domain predictions
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LotjaGi1g1v0019100.2
n.a. DUF21 domain-containing protein; TAIR: AT1G55930.1 CBS domain-containing protein / transporter associated domain-containing protein; Swiss-Prot: sp|Q84R21|Y1559_ARATH DUF21 domain-containing protein At1g55930, chloroplastic; TrEMBL-Plants: tr|I1M6I6|I1M6I6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0019100 LjG1.1_chr1 2372566 2379317 +
3 domain predictions
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LotjaGi1g1v0292100_LC.1
n.a. DUF21 domain-containing protein; TAIR: AT1G55930.1 CBS domain-containing protein / transporter associated domain-containing protein; Swiss-Prot: sp|Q84R21|Y1559_ARATH DUF21 domain-containing protein At1g55930, chloroplastic; TrEMBL-Plants: tr|I3SZ67|I3SZ67_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0292100_LC LjG1.1_chr1 70848710 70849519 +
2 domain predictions
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LotjaGi6g1v0148300.1
n.a. DUF21 domain-containing protein; TAIR: AT1G55930.1 CBS domain-containing protein / transporter associated domain-containing protein; Swiss-Prot: sp|Q84R21|Y1559_ARATH DUF21 domain-containing protein At1g55930, chloroplastic; TrEMBL-Plants: tr|I1M6I6|I1M6I6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0148300 LjG1.1_chr6 42345209 42356261 +
3 domain predictions
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LotjaGi6g1v0148300.2
n.a. DUF21 domain-containing protein; TAIR: AT1G55930.1 CBS domain-containing protein / transporter associated domain-containing protein; Swiss-Prot: sp|Q84R21|Y1559_ARATH DUF21 domain-containing protein At1g55930, chloroplastic; TrEMBL-Plants: tr|K7KBK9|K7KBK9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0148300 LjG1.1_chr6 42345381 42356251 +
3 domain predictions
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LotjaGi6g1v0148700_LC.1
n.a. DUF21 domain-containing protein; TAIR: AT1G55930.1 CBS domain-containing protein / transporter associated domain-containing protein; Swiss-Prot: sp|Q84R21|Y1559_ARATH DUF21 domain-containing protein At1g55930, chloroplastic; TrEMBL-Plants: tr|I1M6I6|I1M6I6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0148700_LC LjG1.1_chr6 42381989 42384372 +
2 domain predictions
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