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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0019100 |
| Transcript ID | LotjaGi1g1v0019100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF21 domain-containing protein; TAIR: AT1G55930.1 CBS domain-containing protein / transporter associated domain-containing protein; Swiss-Prot: sp|Q84R21|Y1559_ARATH DUF21 domain-containing protein At1g55930, chloroplastic; TrEMBL-Plants: tr|I1M6I6|I1M6I6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0019100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:2372566..2379317) extracted from Lotus japonicus Gifu genome v1.2.
TTAACAACGTGCAAGGTTCGTGAATTGGCTGAAAAGGAGTCTGAAAATGGTGTCTTCAGACTGCTCCGAAGTGATGTTAC TCGATTCCTTACGACTATACTCATTGGCACAACGTATTATCCTTTCATTGGTTTCATTATTGAAATTATTATTTTTTCAA TTTGATTATAGATGTTTCTCATGTTACTATTCTGCTGTACAGTGTGGTCAATATTGGGGCAACTGCTCTGGTCACAGAAG CTGCAACTGCAATATTTGGTGAAGCTGGTGTTAGTGCAGCAACAGGAGTGATGACGGTATGATTTGATTTTCGTGTTCTA GTGTTTGTCAAAATCTTCTATTTCTTGGACATTAAAACATGCTGAAATGGTTTATGCATATATTTAATTGTCCAAAATTC AGATCAATTACCCACTTATTATGATTAATTTGGAACGTTTAATCTTTCAGTATTTGAACATGCTGTCCCATTAAACTTGC AAACTCCTGATGTGGTGGGAACAAAAATTTGAATTGTAAAGCTTGCTAGCTTTATCACCAGTTTGTGAAAAAGGTGCCTG AGCTAACCTTTGAGTGGGTACAAGGAGGGGGGGGGAGGTTGATATGATATTTTAATTTTATTTCTACCTTTAAAGGCTGT TCAGAGGTCAGCAGTTTACGCAGCATCATAGGAAATAGAATGTGCCTCAGTATCTCATTTTGTGCTACATTTTTACTTCT TTTCTTTTCTATAATATTTAGGATACGAGTATTATCTTATTAAATAGAATGGTTGATCAGATTGGTCACCGAACATTGCA CATTTGCACTGTGTTTTTTTGTTGACCCAGGGACATGTTGTCCGGGACCTCATGCATGACCTTTATTTTCTCTAAAATAT ATTGTCACAAATGCAACTCAACCAAGTTTGGTTTGATTAATTGAAGCTTAAAATTTCTTAGGATATCCTAGTCTCTTCGT CAGTACTTGGTTCCTAGGCTTATTGCCTTATCCCCAGCAAAAGCATACAACAGTAACAACATTGTGTGACTGTATCCTTT TGTGCTTCCTCCTTTACCTCCTCCTTTTGGTGCTCAGATGCTGACCTTTTGAACTGGAAAAAAGTTTTCTCCTCAAGTCT CCCTAAACTTTCAACAAAAGGTGTGCACTGTATGATGCAAAAGGTTTTTGGCTTGATTCAGTTTTTTTAATGAAAAAACT ATATTTTTTATTTTTTCAAAAAATTTCTTTTAAAAATTTCAATTTCGTTTGGTTCAACATATGAAATAAATCAAATTTGT GATTATTTTGAAAGGCTACTTTATGTAGTTTCTGGAAATAATTCGAAATTAAAAGTTGTTTTCATAATTGTAACCAAATG AAAATTAACTTCTGCTTTATATAAAATCTTTGGTAAATAAATCACTTACTTAAAAGCTTACGAAACAGGCCCTTATTTAT CCTCTTAATTTTCATGCATGCTTTAATATCTTTTTATTAGTTTCTGATTATGATCTACTTTTTTTAAAGCAAAATCAGGA TGCTATGTTTTACATAATTTCATAATTCTATGTTTCCTCTCCCTCACACTGCCAGTGTAATTTGTGCAGATTTATAAGTT TACATCAAAGCTTATTTCTCATAATTTCTGATTTTCCTTTTCTCTCCATAATCAAACAAGGTTGTCATTTTGCTTCTCAC GGAAATTACTCCAAAAAGTATAGCGGTTCATAATGCCACTGAGGTGGCTCGATTTGTGGTAAGTTTTAAATTTCTTCCTT TTCTTTTATATTATTTGGAAAAAGAAATGATGCTGAGTAAAGCATTTTTGATTATTTTCATGTCATTCATATTTACGTGA TGTTGCTTCAACTTCGTTTTGTAACAAATATTGATATTGATTTCAATGCCTCTAGGTCAGGCCAGTGGCATGGCTTTCCC TGGTTTTGTATCCTGTAGGGAGAATTGTTACTTATCTTTCAATGGGGATGCTGAAATTGCTTGGCTTAAAGGGAAGAAGG TCTGCTTAATCTTCCCTTATCATATTTAACATACTGCTTTTGATTCTTTATGAATGTTTTGTGAAATATTATTACAATCT GTGATGCAAACTGTCCATTTTCTAATGTTAAGTTCTTGCCTAGAAGTTATGTCAAATAGAACAAATGAAGAATTGAAGTA AATTTATTGATCATGAGTGGTTTGTATGTGGTCTATTTTCTAATGTGAAGTTTTAAGATGTTTACTGTAAATATGTCGAT AATATTTATACGGAAAGTGGCACCTGATTGTTGAAGCATTGAATTTGTGATGTTCTCATTGATTTATTAGAAATTCAATA CTAAAGTCACTGTTTTCTTTGCCAGTGAGCCATATGTAACTGAAGAGGAGCTTAAATTGATGCTAAGGGGTGCAGAATTA AGTGGGGCAATAGAGGAAGAAGAACAGGTGATGAATATTGGGTTTAACATTCTATTAGTCGCATCATTTATCTGTGTTTA AATCGTAAATAGAATTTTATAGATATGCTTCATAATCATCACAAAATTGTGTCTTGTTTGAATGACATTATTGTTTTTAA CAAAACGGGAACAGATTCATCTGAATAACATGAATAGATTTCAATTTTCCACCTGGAAATACACCTCTCTTTCTTTTAGT AATAATTAGATATATTTATTGTTGTGATTTTTCATAACACTTACAAAAGCCCTATCTGTATATGTTTTTTAGTCTATTTT AAATTGTTTGTTTTCTGATTAGTATCTGAATATGTATATTACAGGATATGATTGAAAATGTGTTGGAGATAAAAGATACA CATGTCAGAGAGGTTATGACACCTCTTGTTGATGTTGTTGCAATTGATGCCAGTTCAAGCCTTGTAGATTTTCATCACTT GTGGGTCACACATCAATATTCAAGGTATTTAAAGATTCCCTTGCTTCAACTTATATATATTTTTTTTTCCAATGCACTAA CTGCATCAAGACTTGTTTCCCAGGGTACCTGTTTTTGAGCAACGCGTTGATAATATAATGGGTATAGCATATGCAATGGA TCTGCTTGATTATGTTCAGAAGGTTGGGAGATTTTATTTCTCTTATCTATTATGAATTATAAGTGCTTTACCTATTAATT GCATCCTCCAATCTCATAGTTTGCAGAATTATTATCTGTTTGATTTTGAAGGGCGAGTTGCTAGAAAGTACAACAGTTGG AGATATGGCTCACAAGCCTGCATATTTTGTACCTGGTAACTTATTCTTAATCTTGGATTCACCTTTGTTTGTGTAATTAC TTACTGTATGGCTGGTATTGTATTGTTGAATCATTTGTTATAGCAACAGATTTATATCTGTTTAACTTATTGCAGAATGT TGGAGGAATAAATTCTTATGACTGATTTTGCAGATTCAATGTCTGTTTGGAATCTTCTTAGAGAGTTCCGAATCAGGAAG GTTCACATGGCTGTCGTTCTTAATGAATACGGTGGAACTGTGGGAGTATGTATACCATACCAGAATACAACCAACTCAGA GCTCTTTGTCTGCCATAAATATGGATATATGAAGCTCTAAATCTATGATTTTCTGATGATATATATACCATGCTAATTAC AACCATTGACCCGAATGAAATAGAAAGATATCAATTAGAACATGCCATAAACCTATCACTATCAGTGTCTGTTTCTTTCG ACATCTTCTGTAATTATATACCAACCTCTTTTTTTAGTTATGTTAATTTGAAAAAGCCAGTTGAATCAACATTCAAATCA TACCAGTCATGAACTATTGCTAGAATTTTCATAAATAATCCGGGAAATAAATTAGCTTTGTATTAGTATAGATACACCCT TTGAATTTATTTTGACTATAGTTTTCACGGTCATCCTTTCATGTGCTTGTTACATGCTTTCACCAACAACTTAAGTTTTT GGGATAGTTGGTGCATGAGAGAGAGGCTTACTTCTTTAGTGAAACTGAAGTTTAGAAGATTGTTACTACACTCTTCAAGT CTTCTGAAATCCAGTCTGTGTGATCTGCATATAAGTTGTAACTATTTTCACAAGGTGATGTATTAAATCTAGATGTCTCA TTTATATTTCCATTTAACAGGTTGTAACTCTTGAAGATGTTGTGGAGGAAATTGTTGGTGAAATCTTTGATGAAAATGAC TCAAAGGTAAAGGCTAAGTATAAATATTTGTATCTTGAATTTGTTTCTTTCAACTGCATTTTTAAATAGCTGAAACAAAG CATATATTGAATTCGTCTTTATTCTATTTCAGCCGAAAAAGAAAAACAAAGGGAAAAAATATCGGCACTCTGCACTCTTT GTTCAACAGTAGTTTTGTAATGAATATTTATATTTATTTTGTATGTTCTTTGTATACCTTGCTCATTTGTTTTTGTTGCC TTATTTTAATTCTAATTGCTTAGATTCTGACAAGTGACAACTCTACTATTTTTAGTAGCCTTACTTAAAGTCCATCTTGT CTTTTAGGCTCTCTATTTGCATTCAGGACTTCCAACTTTAACATTGGAGGAGTTATGGCTTCAGATTGATAAAATTCATA GCTGTTAAAAAGGTTCATATTTTTCAGAGCACAACAATTTGTGCTGAAATTCATAGTGTAGCAACATAATATTGTATTGT TCAGAATGGCAAGCTGTAATGTAACAGTATCTCCAGAAATAAAGGAAGAGATTAGACTATTGAGATGGATCAATGTTTAA TTATATACAATCCAAGAGCATGTTCTATGTTACTTCAGAAGCAGGCGTGGTCTGTTGGATAAAACATTAAAAATGAAATG CAGTTGTTTGTACATCTTAGGCATGTTCTATGTTCAAATACAAACTCTTCAAAATAGGAGTATAAATATGTGAGTATGAT GTGTAAACGAGAGGGGAACAAGCTATGATGTGTAAAAGTGATAAGGATGCTTGTAAGAACGGTTTTGCAGGAATGCTTGT GCTACTCTGTGATTCCTGCAAATATAATGCCCATGATATGTTCATAACGTTTGACTGTTTTGCTATTAGTGGCTGATTAT GTATTTCTGAATATAAAAATATTTTATCTGTTATGTTTTGTAGCCTTTGATTTTTTATTTTGGCAACTATTTGCTACTTT AATGATTGACATGCTGATTTTTCAATAACCTTTCTACAATCTTTTGGGGTTATTCAACAGGAGGAGATTCAGAAAAAGAC CGGCTACGTAGTAATGCGAGCAGAGGGTATATTTGACGTGGATGCGAACACATCCATTGATCAGCTCTCTGATGATTTGA ACATCAAGATGCCAGAGGTCACCACTTTTTCATATACGCACCTAACATATTGGTCTTCTCATGGCAGTACTTGTAATCAC TGTCAAGAATCTTTTATTAGTTGCATGGAGTTAGTATGATTTATTTTGTTGCACCACGTCAGTTTTTCCTTTTAATATAT ATATATATATATATATATATATATATATATAATTATATAATTATATACTATCCAAGAGCATGATTTGTCATTAGTTCTAG AACCAATAAATAAGTTGTTTGTGAATTTGTCCTTCAAAACCATTGTAGCTTTGTAATGTAGAGTTGTAGACGGTCAGCAT CTTTGCATCTCAATACATTCTTGTGCTAGCTTACAATGCTATAAGTCTGTTGAAGAAGTTCGGGCTTCTTAATAGTAGGT TGCGTCTGCAATTCCAGGGTATTCAATATGAGACAGTATCAGGCTTTGTGTGTGAAGCATTTGGATACATCCCAAGGACA GGCGAGTCCATCAAAGTTGTACTTGAAAGGGAAGATGAAGATGATAACGAAGAATCTGATGCTGACCGCCAGGATCAGAA AGAGAAGAACCAGATTTTCAAACTTGAGGTAATCAGTTTGTCATTCTTCGCCAGTATCTAAAATTTGTCACATATGATAG TCTTATTTATTTTAGCTTATGTATCCAAAAGTTGGAGCCTGGAGAGAATGGTTAACATCACTAATATCAGAAAGTGTAAT GATAGGTAACATTTGACACACAAATAGAATGATAGGTACCACTTTTTCCCTATGTTCTGTTCTGCTTACATAGTTACCCG CACCAAACATATAACAGAATTCATATATTCTGTTCTGTCCTATTCAATCTTGTTTACAGAACACTCCCATATTTTAACAC ACTGACTAAGTGACCATGCATTAATGCATATACCTAATTTTCAATTTTGTTACTCCACTATTACTAATGCTACATTAAAG ACATCAATGTGATGTTCCTTGAGAAGCATGTTCAACAAATTTGTGCTTTTGATTTCTGTTTTTTGAATTTATGGTTAAGG AAGCAACGTCATCTTATTAGCTCATCAATATCGAGTTTTTCCAAATTTATGCTATTTTGTTTTTTGTTTGCAAAGTCCTT GTGCCTTTTCAACTCGCATAAGCATCAACTGTTTATTTTTAAACTTGCATAAAGTAATAAAGCTGAATCTAGACCTTCTC CTTTGTCTTCGGTGCAGATACTAGCAGGAAATGCCAGAAAAGTGAGCGCTGTTCGGTTTGAAAGGGTAAATAATGGGGAT GAAATGTCGGAGACTAAAGAAGTCACTCGCTTGGTCCCGAAAATCATGAAAAGAAGAAAATGGAGCAGTGATGAGGACTC AGAGGATGATGCAGAATATGATGGAGAAGCTGCATTGGCAAAGAGACTACATGATGATGCAATTTCTAGTGAATTTGTAG TTGATCAGGAAAGTTCTCATACAAAAAGTTGA
CDS sequence (LotjaGi1g1v0019100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGGTTGTCATTTTGCTTCTCACGGAAATTACTCCAAAAAGTATAGCGGTTCATAATGCCACTGAGGTGGCTCGATT TGTGGTCAGGCCAGTGGCATGGCTTTCCCTGGTTTTGTATCCTGTAGGGAGAATTGTTACTTATCTTTCAATGGGGATGC TGAAATTGCTTGGCTTAAAGGGAAGAAGTGAGCCATATGTAACTGAAGAGGAGCTTAAATTGATGCTAAGGGGTGCAGAA TTAAGTGGGGCAATAGAGGAAGAAGAACAGGATATGATTGAAAATGTGTTGGAGATAAAAGATACACATGTCAGAGAGGT TATGACACCTCTTGTTGATGTTGTTGCAATTGATGCCAGTTCAAGCCTTGTAGATTTTCATCACTTGTGGGTCACACATC AATATTCAAGGGTACCTGTTTTTGAGCAACGCGTTGATAATATAATGGGTATAGCATATGCAATGGATCTGCTTGATTAT GTTCAGAAGGGCGAGTTGCTAGAAAGTACAACAGTTGGAGATATGGCTCACAAGCCTGCATATTTTGTACCTGATTCAAT GTCTGTTTGGAATCTTCTTAGAGAGTTCCGAATCAGGAAGGTTCACATGGCTGTCGTTCTTAATGAATACGGTGGAACTG TGGGAGTTGTAACTCTTGAAGATGTTGTGGAGGAAATTGTTGGTGAAATCTTTGATGAAAATGACTCAAAGGAGGAGATT CAGAAAAAGACCGGCTACGTAGTAATGCGAGCAGAGGGTATATTTGACGTGGATGCGAACACATCCATTGATCAGCTCTC TGATGATTTGAACATCAAGATGCCAGAGGGTATTCAATATGAGACAGTATCAGGCTTTGTGTGTGAAGCATTTGGATACA TCCCAAGGACAGGCGAGTCCATCAAAGTTGTACTTGAAAGGGAAGATGAAGATGATAACGAAGAATCTGATGCTGACCGC CAGGATCAGAAAGAGAAGAACCAGATTTTCAAACTTGAGATACTAGCAGGAAATGCCAGAAAAGTGAGCGCTGTTCGGTT TGAAAGGGTAAATAATGGGGATGAAATGTCGGAGACTAAAGAAGTCACTCGCTTGGTCCCGAAAATCATGAAAAGAAGAA AATGGAGCAGTGATGAGGACTCAGAGGATGATGCAGAATATGATGGAGAAGCTGCATTGGCAAAGAGACTACATGATGAT GCAATTTCTAGTGAATTTGTAGTTGATCAGGAAAGTTCTCATACAAAAAGTTGA
Protein sequence (LotjaGi1g1v0019100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTVVILLLTEITPKSIAVHNATEVARFVVRPVAWLSLVLYPVGRIVTYLSMGMLKLLGLKGRSEPYVTEEELKLMLRGAE LSGAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVAIDASSSLVDFHHLWVTHQYSRVPVFEQRVDNIMGIAYAMDLLDY VQKGELLESTTVGDMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIVGEIFDENDSKEEI QKKTGYVVMRAEGIFDVDANTSIDQLSDDLNIKMPEGIQYETVSGFVCEAFGYIPRTGESIKVVLEREDEDDNEESDADR QDQKEKNQIFKLEILAGNARKVSAVRFERVNNGDEMSETKEVTRLVPKIMKRRKWSSDEDSEDDAEYDGEAALAKRLHDD AISSEFVVDQESSHTKS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 17 | 17 | - | – | |
| ProSiteProfiles | 1 | 89 | 89 | 23.945 | ||
| Pfam | 1 | 89 | 89 | 2.1E-19 | ||
| PANTHER | 1 | 380 | 380 | 2.5E-210 | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| Phobius | 1 | 17 | 17 | - | – | |
| PANTHER | 1 | 380 | 380 | 2.5E-210 | – | |
| Phobius | 2 | 9 | 8 | - | – | |
| Phobius | 10 | 17 | 8 | - | – | |
| Phobius | 18 | 32 | 15 | - | – | |
| Phobius | 33 | 54 | 22 | - | – | |
| Phobius | 55 | 417 | 363 | - | – | |
| Gene3D | 83 | 238 | 156 | 1.1E-49 | – | |
| SUPERFAMILY | 91 | 230 | 140 | 1.01E-32 | – | |
| CDD | 103 | 224 | 122 | 1.06202E-42 | – | |
| Pfam | 104 | 162 | 59 | 5.4E-4 | ||
| ProSiteProfiles | 108 | 169 | 62 | 9.139 | ||
| Pfam | 172 | 227 | 56 | 1.1E-6 | ||
| ProSiteProfiles | 175 | 233 | 59 | 11.527 | ||
| Gene3D | 245 | 337 | 93 | 1.4E-15 | ||
| SUPERFAMILY | 246 | 355 | 110 | 1.88E-13 | ||
| SMART | 248 | 351 | 104 | 2.0E-12 | ||
| Pfam | 249 | 350 | 102 | 4.7E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Flavin adenine dinucleotide binding | Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2. |
Expression pattern of LotjaGi1g1v0019100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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