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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR005713
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.707s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v3112990.1
n.a. PREDICTED: 40S ribosomal protein S15-4-like [Cicer arietinum] gi|502112438|ref|XP_004494331.1| chr4 41495156 41496656 -
2 domain predictions
3 GO terms
Lj5g3v1015870.1
n.a. PREDICTED: 40S ribosomal protein S15-4-like [Cicer arietinum] gi|502115131|ref|XP_004495132.1| chr5 16922014 16923756 -
2 domain predictions
3 GO terms
LotjaGi4g1v0456200.1
n.a. 30S ribosomal protein S19; TAIR: AT5G09500.1 Ribosomal protein S19 family protein; Swiss-Prot: sp|P31674|RS15_ORYSJ 40S ribosomal protein S15; TrEMBL-Plants: tr|I3SMI9|I3SMI9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0456200 LjG1.1_chr4 82766279 82768138 -
2 domain predictions
3 GO terms
LotjaGi4g1v0456200.2
n.a. 30S ribosomal protein S19; TAIR: AT5G09500.1 Ribosomal protein S19 family protein; Swiss-Prot: sp|P31674|RS15_ORYSJ 40S ribosomal protein S15; TrEMBL-Plants: tr|I1KNN1|I1KNN1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0456200 LjG1.1_chr4 82766442 82768115 -
2 domain predictions
3 GO terms
LotjaGi5g1v0176100.1
n.a. 30S ribosomal protein S19; TAIR: AT1G04270.1 cytosolic ribosomal protein S15; Swiss-Prot: sp|O65059|RS15_PICMA 40S ribosomal protein S15; TrEMBL-Plants: tr|I3SNQ1|I3SNQ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0176100 LjG1.1_chr5 44946173 44949336 -
2 domain predictions
3 GO terms
LotjaGi5g1v0176100.2
n.a. 30S ribosomal protein S19; TAIR: AT5G09500.1 Ribosomal protein S19 family protein; Swiss-Prot: sp|Q945U1|RS15_ELAOL 40S ribosomal protein S15; TrEMBL-Plants: tr|I3SNQ1|I3SNQ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0176100 LjG1.1_chr5 44947723 44949089 -
2 domain predictions
3 GO terms