Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

GO:0015935

View this GO term in other databases

Overview

Field Value
Namespace Cellular component
Short description Small ribosomal subunit
Full defintion The smaller of the two subunits of a ribosome.
Subterm of

Relationships

The relationship of GO:0015935 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

A force layout showing the ancestor tree for GO:0015935, and its immediate children. If you wish to explore the tree dynamically, please use the GO Explorer.

  • Drag and drop nodes to manually position (i.e. fix) them
  • Double click on a node to unfix the node
  • Press Alt and double click to visit the page containing further details of a GO term
  • Right clicking on a node will reveal a context menu

Controls

Force layout

Every force layout is different—we have picked a set of parameters which suits most GO ancestor tree chart well. If you mess something up—don't worry: hitting the "reset view" button above will reset the chart to its default layout.

Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCmah

Associated Lotus transcripts 66

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0054209.1
– Ribosomal protein S4 [Lotus japonicus] gi|13518426|ref|NP_084786.1|
GO terms
3
Lj0g3v0080839.1
– PREDICTED: 40S ribosomal protein S9-2-like [Glycine max] gi|356562820|ref|XP_003549666.1|
GO terms
3
Lj0g3v0085319.1
– PREDICTED: 40S ribosomal protein S23-like [Cicer arietinum] gi|502121856|ref|XP_004497466.1|
GO terms
3
Lj0g3v0199009.1
– PREDICTED: 40S ribosomal protein S5-like [Cicer arietinum] gi|502078783|ref|XP_004486053.1|
GO terms
3
Lj1g3v3330170.1
– PREDICTED: 40S ribosomal protein S3-3-like [Cicer arietinum] gi|502122563|ref|XP_004497806.1|
GO terms
3
Lj1g3v4315320.1
– PREDICTED: 40S ribosomal protein S20-1-like [Glycine max] gi|356504833|ref|XP_003521199.1|
GO terms
3
Lj1g3v4579100.1
– PREDICTED: 40S ribosomal protein S23-like [Cicer arietinum] gi|502121856|ref|XP_004497466.1|
GO terms
3
Lj1g3v4694270.1
– 40S ribosomal protein S2 [Medicago truncatula] gi|357521321|ref|XP_003630949.1|
GO terms
3
Lj1g3v4763800.1
– PREDICTED: 40S ribosomal protein S5-like [Glycine max] gi|356530665|ref|XP_003533901.1|
GO terms
3
Lj2g3v0156840.1
– 40S ribosomal protein S2 [Medicago truncatula] gi|357521321|ref|XP_003630949.1|
GO terms
3
Lj3g3v0937870.1
– PREDICTED: 40S ribosomal protein SA-like [Cicer arietinum] gi|502136969|ref|XP_004502915.1|
GO terms
3
Lj3g3v2310040.1
– PREDICTED: 40S ribosomal protein S23-like [Cicer arietinum] gi|502121856|ref|XP_004497466.1|
GO terms
3
Lj3g3v2575940.1
– PREDICTED: 40S ribosomal protein SA-like [Cicer arietinum] gi|502136998|ref|XP_004502927.1|
GO terms
3
Lj3g3v2575940.2
– PREDICTED: 40S ribosomal protein SA-like [Cicer arietinum] gi|502136998|ref|XP_004502927.1|
GO terms
3
Lj4g3v0462600.1
– PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Glycine max] gi|356521382|ref|XP_003529335.1|
GO terms
3
Lj4g3v1635200.1
– PREDICTED: 40S ribosomal protein S9-2-like [Cicer arietinum] gi|502152082|ref|XP_004508755.1|
GO terms
3
Lj4g3v2655220.1
– PREDICTED: 40S ribosomal protein SA-like [Fragaria vesca subsp]. vesca] gi|470101196|ref|XP_004287064.1|
GO terms
3
Lj4g3v2655230.1
– PREDICTED: 40S ribosomal protein SA-like [Cicer arietinum] gi|502136998|ref|XP_004502927.1|
GO terms
3
Lj4g3v3112990.1
– PREDICTED: 40S ribosomal protein S15-4-like [Cicer arietinum] gi|502112438|ref|XP_004494331.1|
GO terms
3
Lj4g3v3113160.1
– 40S ribosomal protein S2 [Medicago truncatula] gi|357521321|ref|XP_003630949.1|
GO terms
3
Lj5g3v0616380.1
– PREDICTED: 40S ribosomal protein S23-like [Cicer arietinum] gi|502121856|ref|XP_004497466.1|
GO terms
3
Lj5g3v1015870.1
– PREDICTED: 40S ribosomal protein S15-4-like [Cicer arietinum] gi|502115131|ref|XP_004495132.1|
GO terms
3
Lj6g3v1091170.1
– PREDICTED: 40S ribosomal protein S20-2-like [Cicer arietinum] gi|502107134|ref|XP_004493168.1|
GO terms
3
Ljchlorog3v0000410.1
– Ribosomal protein S2 [Lotus japonicus] gi|13518439|ref|NP_084799.1|
GO terms
3
LotjaGi1g1v0218000.1
– 30S ribosomal protein S4; TAIR: AT5G39850.1 Ribosomal protein S4; Swiss-Prot: sp|Q9FLF0|RS92_ARATH 40S ribosomal protein S9-2; TrEMBL-Plants: tr|I3T2G7|I3T2G7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0218000
GO terms
3
LotjaGi1g1v0556400.1
– 30S ribosomal protein S3; TAIR: AT5G35530.1 Ribosomal protein S3 family protein; Swiss-Prot: sp|Q9FJA6|RS33_ARATH 40S ribosomal protein S3-3; TrEMBL-Plants: tr|I3S6J8|I3S6J8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0556400
GO terms
3
LotjaGi1g1v0681100_LC.1
– 30S ribosomal protein S5; TAIR: AT1G58380.1 Ribosomal protein S5 family protein; Swiss-Prot: sp|Q8L8Y0|RS21_ARATH 40S ribosomal protein S2-1; TrEMBL-Plants: tr|I1K5K3|I1K5K3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0681100_LC
GO terms
3
LotjaGi1g1v0681100_LC.2
– 30S ribosomal protein S5; TAIR: AT1G58380.1 Ribosomal protein S5 family protein; Swiss-Prot: sp|Q8L8Y0|RS21_ARATH 40S ribosomal protein S2-1; TrEMBL-Plants: tr|I1K5K3|I1K5K3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0681100_LC
GO terms
3
LotjaGi1g1v0681100_LC.3
– 30S ribosomal protein S5; TAIR: AT1G58380.1 Ribosomal protein S5 family protein; Swiss-Prot: sp|Q8L8Y0|RS21_ARATH 40S ribosomal protein S2-1; TrEMBL-Plants: tr|I1K5K3|I1K5K3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0681100_LC
GO terms
3
LotjaGi1g1v0693700.1
– 30S ribosomal protein S12; TAIR: AT5G02960.1 Ribosomal protein S12/S23 family protein; Swiss-Prot: sp|P46297|RS23_FRAAN 40S ribosomal protein S23; TrEMBL-Plants: tr|I3ST84|I3ST84_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0693700
GO terms
3
LotjaGi1g1v0693700.2
– 30S ribosomal protein S12; TAIR: AT5G02960.1 Ribosomal protein S12/S23 family protein; Swiss-Prot: sp|Q9M5Z9|RS23_EUPES 40S ribosomal protein S23; TrEMBL-Plants: tr|I3ST84|I3ST84_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0693700
GO terms
3
LotjaGi1g1v0693700.3
– 30S ribosomal protein S12; TAIR: AT5G02960.1 Ribosomal protein S12/S23 family protein; Swiss-Prot: sp|Q9M5Z9|RS23_EUPES 40S ribosomal protein S23; TrEMBL-Plants: tr|I3ST84|I3ST84_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0693700
GO terms
3
LotjaGi1g1v0693700.4
– 30S ribosomal protein S12; TAIR: AT5G02960.1 Ribosomal protein S12/S23 family protein; Swiss-Prot: sp|Q9M5Z9|RS23_EUPES 40S ribosomal protein S23; TrEMBL-Plants: tr|I3ST84|I3ST84_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0693700
GO terms
3
LotjaGi1g1v0693700.5
– 30S ribosomal protein S12; TAIR: AT5G02960.1 Ribosomal protein S12/S23 family protein; Swiss-Prot: sp|Q9M5Z9|RS23_EUPES 40S ribosomal protein S23; TrEMBL-Plants: tr|I3ST84|I3ST84_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0693700
GO terms
3
LotjaGi1g1v0724100.1
– 30S ribosomal protein S10; TAIR: AT3G45030.1 Ribosomal protein S10p/S20e family protein; Swiss-Prot: sp|P49200|RS201_ARATH 40S ribosomal protein S20-1; TrEMBL-Plants: tr|I3SJC9|I3SJC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0724100
GO terms
3
LotjaGi1g1v0742600.1
– 30S ribosomal protein S7; TAIR: AT2G37270.1 ribosomal protein 5B; Swiss-Prot: sp|O65731|RS5_CICAR 40S ribosomal protein S5; TrEMBL-Plants: tr|I3SG74|I3SG74_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0742600
GO terms
3
LotjaGi1g1v0742600.2
– 30S ribosomal protein S7; TAIR: AT2G37270.1 ribosomal protein 5B; Swiss-Prot: sp|Q9ZUT9|RS51_ARATH 40S ribosomal protein S5-1; TrEMBL-Plants: tr|A0A151QZT3|A0A151QZT3_CAJCA 40S ribosomal protein S5; Found in the gene: LotjaGi1g1v0742600
GO terms
3
LotjaGi2g1v0072200.1
– 30S ribosomal protein S5; TAIR: AT3G57490.1 Ribosomal protein S5 family protein; Swiss-Prot: sp|Q9SCM3|RS24_ARATH 40S ribosomal protein S2-4; TrEMBL-Plants: tr|V7CT27|V7CT27_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0072200
GO terms
3
LotjaGi2g1v0364200.1
– 30S ribosomal protein S12; TAIR: AT5G02960.1 Ribosomal protein S12/S23 family protein; Swiss-Prot: sp|P46297|RS23_FRAAN 40S ribosomal protein S23; TrEMBL-Plants: tr|V7CX13|V7CX13_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0364200
GO terms
3
LotjaGi2g1v0364200.2
– 30S ribosomal protein S12; TAIR: AT5G02960.1 Ribosomal protein S12/S23 family protein; Swiss-Prot: sp|P46297|RS23_FRAAN 40S ribosomal protein S23; TrEMBL-Plants: tr|V7CX13|V7CX13_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0364200
GO terms
3
LotjaGi2g1v0364200.3
– 30S ribosomal protein S12; TAIR: AT5G02960.1 Ribosomal protein S12/S23 family protein; Swiss-Prot: sp|P46297|RS23_FRAAN 40S ribosomal protein S23; TrEMBL-Plants: tr|V7CX13|V7CX13_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0364200
GO terms
3
LotjaGi2g1v0364200.4
– 30S ribosomal protein S12; TAIR: AT5G02960.1 Ribosomal protein S12/S23 family protein; Swiss-Prot: sp|P46297|RS23_FRAAN 40S ribosomal protein S23; TrEMBL-Plants: tr|V7CX13|V7CX13_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0364200
GO terms
3
LotjaGi3g1v0130900.1
– 40S ribosomal protein SA; TAIR: AT3G04770.2 40s ribosomal protein SA B; Swiss-Prot: sp|O65751|RSSA_CICAR 40S ribosomal protein SA; TrEMBL-Plants: tr|A0A151QSB7|A0A151QSB7_CAJCA 40S ribosomal protein SA; Found in the gene: LotjaGi3g1v0130900
GO terms
3
LotjaGi3g1v0314100.1
– 30S ribosomal protein S3; TAIR: AT5G35530.1 Ribosomal protein S3 family protein; Swiss-Prot: sp|Q9FJA6|RS33_ARATH 40S ribosomal protein S3-3; TrEMBL-Plants: tr|I3SJI7|I3SJI7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0314100
GO terms
3
LotjaGi3g1v0409500.1
– 40S ribosomal protein SA; TAIR: AT3G04770.2 40s ribosomal protein SA B; Swiss-Prot: sp|O65751|RSSA_CICAR 40S ribosomal protein SA; TrEMBL-Plants: tr|A0A1J7HDL8|A0A1J7HDL8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0409500
GO terms
3
LotjaGi3g1v0409500.2
– 40S ribosomal protein SA; TAIR: AT3G04770.2 40s ribosomal protein SA B; Swiss-Prot: sp|O65751|RSSA_CICAR 40S ribosomal protein SA; TrEMBL-Plants: tr|A0A1J7HDL8|A0A1J7HDL8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0409500
GO terms
3
LotjaGi3g1v0409500.3
– 40S ribosomal protein SA; TAIR: AT3G04770.1 40s ribosomal protein SA B; Swiss-Prot: sp|O22518|RSSA_SOYBN 40S ribosomal protein SA; TrEMBL-Plants: tr|A0A0R0FJR0|A0A0R0FJR0_SOYBN 40S ribosomal protein SA; Found in the gene: LotjaGi3g1v0409500
GO terms
3
LotjaGi4g1v0057800.1
– 30S ribosomal protein S5; TAIR: AT2G33800.1 Ribosomal protein S5 family protein; Swiss-Prot: sp|Q9ST69|RR5_SPIOL 30S ribosomal protein S5, chloroplastic; TrEMBL-Plants: tr|I1KLL8|I1KLL8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0057800
GO terms
3
LotjaGi4g1v0249100.1
– 30S ribosomal protein S4; TAIR: AT5G39850.1 Ribosomal protein S4; Swiss-Prot: sp|Q9FLF0|RS92_ARATH 40S ribosomal protein S9-2; TrEMBL-Plants: tr|V7CDF1|V7CDF1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0249100
GO terms
3
LotjaGi4g1v0249100.2
– 30S ribosomal protein S4; TAIR: AT5G39850.1 Ribosomal protein S4; Swiss-Prot: sp|Q9FLF0|RS92_ARATH 40S ribosomal protein S9-2; TrEMBL-Plants: tr|V7CDF1|V7CDF1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0249100
GO terms
3
LotjaGi4g1v0249100.3
– 30S ribosomal protein S4; TAIR: AT5G39850.1 Ribosomal protein S4; Swiss-Prot: sp|Q9FLF0|RS92_ARATH 40S ribosomal protein S9-2; TrEMBL-Plants: tr|A0A0B2SUR7|A0A0B2SUR7_GLYSO 40S ribosomal protein S9-2; Found in the gene: LotjaGi4g1v0249100
GO terms
3
LotjaGi4g1v0456200.1
– 30S ribosomal protein S19; TAIR: AT5G09500.1 Ribosomal protein S19 family protein; Swiss-Prot: sp|P31674|RS15_ORYSJ 40S ribosomal protein S15; TrEMBL-Plants: tr|I3SMI9|I3SMI9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0456200
GO terms
3
LotjaGi4g1v0456200.2
– 30S ribosomal protein S19; TAIR: AT5G09500.1 Ribosomal protein S19 family protein; Swiss-Prot: sp|P31674|RS15_ORYSJ 40S ribosomal protein S15; TrEMBL-Plants: tr|I1KNN1|I1KNN1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0456200
GO terms
3
LotjaGi4g1v0457300.1
– 30S ribosomal protein S5; TAIR: AT3G57490.1 Ribosomal protein S5 family protein; Swiss-Prot: sp|Q9SCM3|RS24_ARATH 40S ribosomal protein S2-4; TrEMBL-Plants: tr|V7CT27|V7CT27_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0457300
GO terms
3
LotjaGi5g1v0075100.1
– 30S ribosomal protein S12; TAIR: AT5G02960.1 Ribosomal protein S12/S23 family protein; Swiss-Prot: sp|P46297|RS23_FRAAN 40S ribosomal protein S23; TrEMBL-Plants: tr|I3ST84|I3ST84_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0075100
GO terms
3
LotjaGi5g1v0075100.2
– 30S ribosomal protein S12; TAIR: AT5G02960.1 Ribosomal protein S12/S23 family protein; Swiss-Prot: sp|Q9M5Z9|RS23_EUPES 40S ribosomal protein S23; TrEMBL-Plants: tr|I3ST84|I3ST84_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0075100
GO terms
3
LotjaGi5g1v0075100.3
– 30S ribosomal protein S12; TAIR: AT5G02960.1 Ribosomal protein S12/S23 family protein; Swiss-Prot: sp|Q9M5Z9|RS23_EUPES 40S ribosomal protein S23; TrEMBL-Plants: tr|I3ST84|I3ST84_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0075100
GO terms
3
LotjaGi5g1v0075100.4
– 30S ribosomal protein S12; TAIR: AT5G02960.1 Ribosomal protein S12/S23 family protein; Swiss-Prot: sp|P46297|RS23_FRAAN 40S ribosomal protein S23; TrEMBL-Plants: tr|I3ST84|I3ST84_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0075100
GO terms
3
LotjaGi5g1v0075100.5
– 30S ribosomal protein S12; TAIR: AT5G02960.1 Ribosomal protein S12/S23 family protein; Swiss-Prot: sp|P46297|RS23_FRAAN 40S ribosomal protein S23; TrEMBL-Plants: tr|I3ST84|I3ST84_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0075100
GO terms
3
LotjaGi5g1v0112400.1
– 30S ribosomal protein S7; TAIR: AT2G37270.1 ribosomal protein 5B; Swiss-Prot: sp|O65731|RS5_CICAR 40S ribosomal protein S5; TrEMBL-Plants: tr|V7BV97|V7BV97_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0112400
GO terms
3
LotjaGi5g1v0112400.2
– 30S ribosomal protein S7; TAIR: AT2G37270.1 ribosomal protein 5B; Swiss-Prot: sp|Q9ZUT9|RS51_ARATH 40S ribosomal protein S5-1; TrEMBL-Plants: tr|A0A151QZT3|A0A151QZT3_CAJCA 40S ribosomal protein S5; Found in the gene: LotjaGi5g1v0112400
GO terms
3
LotjaGi5g1v0176100.1
– 30S ribosomal protein S19; TAIR: AT1G04270.1 cytosolic ribosomal protein S15; Swiss-Prot: sp|O65059|RS15_PICMA 40S ribosomal protein S15; TrEMBL-Plants: tr|I3SNQ1|I3SNQ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0176100
GO terms
3
LotjaGi5g1v0176100.2
– 30S ribosomal protein S19; TAIR: AT5G09500.1 Ribosomal protein S19 family protein; Swiss-Prot: sp|Q945U1|RS15_ELAOL 40S ribosomal protein S15; TrEMBL-Plants: tr|I3SNQ1|I3SNQ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0176100
GO terms
3
LotjaGi6g1v0008800.1
– 30S ribosomal protein S3; TAIR: AT5G35530.1 Ribosomal protein S3 family protein; Swiss-Prot: sp|Q9FJA6|RS33_ARATH 40S ribosomal protein S3-3; TrEMBL-Plants: tr|A0A151SP15|A0A151SP15_CAJCA 40S ribosomal protein S3-3; Found in the gene: LotjaGi6g1v0008800
GO terms
3
LotjaGi6g1v0209000.1
– 30S ribosomal protein S10; TAIR: AT3G47370.1 Ribosomal protein S10p/S20e family protein; Swiss-Prot: sp|Q9STY6|RS202_ARATH 40S ribosomal protein S20-2; TrEMBL-Plants: tr|I3T0A3|I3T0A3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0209000
GO terms
3
LotjaGi6g1v0209000.3
– 30S ribosomal protein S10; TAIR: AT3G47370.1 Ribosomal protein S10p/S20e family protein; Swiss-Prot: sp|Q9STY6|RS202_ARATH 40S ribosomal protein S20-2; TrEMBL-Plants: tr|I3T0A3|I3T0A3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0209000
GO terms
3

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0015935
Cellular component Small ribosomal subunit 1 1.52