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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006251
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.355s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0281259.1
n.a. PREDICTED: 3-isopropylmalate dehydratase-like [Cicer arietinum] gi|502115660|ref|XP_004495258.1| chr0 145809034 145815885 -
2 domain predictions
3 GO terms
Lj6g3v0096480.1
n.a. PREDICTED: 3-isopropylmalate dehydratase-like [Cicer arietinum] gi|502122527|ref|XP_004497788.1| chr6 1167324 1176534 -
2 domain predictions
3 GO terms
LotjaGi5g1v0163200.1
n.a. 3-isopropylmalate dehydratase large subunit; TAIR: AT4G13430.1 isopropyl malate isomerase large subunit 1; Swiss-Prot: sp|Q94AR8|LEUC_ARATH 3-isopropylmalate dehydratase large subunit, chloroplastic; TrEMBL-Plants: tr|A0A0R0EPY9|A0A0R0EPY9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0163200 LjG1.1_chr5 41825603 41835512 +
2 domain predictions
3 GO terms
LotjaGi5g1v0163200.2
n.a. 3-isopropylmalate dehydratase large subunit; TAIR: AT4G13430.1 isopropyl malate isomerase large subunit 1; Swiss-Prot: sp|Q94AR8|LEUC_ARATH 3-isopropylmalate dehydratase large subunit, chloroplastic; TrEMBL-Plants: tr|A0A0S3SP98|A0A0S3SP98_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0163200 LjG1.1_chr5 41825886 41832529 +
2 domain predictions
3 GO terms
LotjaGi6g1v0010200.2
n.a. 3-isopropylmalate dehydratase, large subunit; TAIR: AT4G13430.1 isopropyl malate isomerase large subunit 1; Swiss-Prot: sp|Q94AR8|LEUC_ARATH 3-isopropylmalate dehydratase large subunit, chloroplastic; TrEMBL-Plants: tr|G7I6Q7|G7I6Q7_MEDTR 3-isopropylmalate dehydratase, large subunit; Found in the gene: LotjaGi6g1v0010200 LjG1.1_chr6 1889966 1899423 -
2 domain predictions
3 GO terms