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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006577
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.196s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0084689.1
n.a. PREDICTED: FAS-associated factor 2-B-like [Glycine max] gi|356564976|ref|XP_003550721.1| chr0 33737994 33740326 -
2 domain predictions
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Lj0g3v0253199.1
n.a. PREDICTED: UBX domain-containing protein 7-like [Cicer arietinum] gi|502154165|ref|XP_004509607.1| chr0 131476062 131483209 +
2 domain predictions
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Lj0g3v0253199.2
n.a. PREDICTED: UBX domain-containing protein 7-like [Cicer arietinum] gi|502154165|ref|XP_004509607.1| chr0 131479192 131483209 +
2 domain predictions
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LotjaGi4g1v0151000.1
n.a. UBX domain-containing protein; TAIR: AT1G14570.1 UBX domain-containing protein; Swiss-Prot: sp|Q94JZ8|PUX7_ARATH Plant UBX domain-containing protein 7; TrEMBL-Plants: tr|I1MMM9|I1MMM9_SOYBN UBX domain-containing protein; Found in the gene: LotjaGi4g1v0151000 LjG1.1_chr4 24873422 24881805 +
2 domain predictions
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LotjaGi4g1v0231200.1
n.a. FAS-associated factor 2-B; TAIR: AT4G10790.1 UBX domain-containing protein; Swiss-Prot: sp|Q9M0N1|PUX10_ARATH Plant UBX domain-containing protein 10; TrEMBL-Plants: tr|A0A151TT74|A0A151TT74_CAJCA FAS-associated factor 2-B; Found in the gene: LotjaGi4g1v0231200 LjG1.1_chr4 54243216 54246067 +
2 domain predictions
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LotjaGi5g1v0199500.1
n.a. FAS-associated factor 2-B-like protein; TAIR: AT4G10790.1 UBX domain-containing protein; Swiss-Prot: sp|Q9M0N1|PUX10_ARATH Plant UBX domain-containing protein 10; TrEMBL-Plants: tr|I1NIG8|I1NIG8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0199500 LjG1.1_chr5 49735104 49746530 +
2 domain predictions
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LotjaGi5g1v0199500.2
n.a. FAS-associated factor 2-B; TAIR: AT4G10790.1 UBX domain-containing protein; Swiss-Prot: sp|Q9M0N1|PUX10_ARATH Plant UBX domain-containing protein 10; TrEMBL-Plants: tr|I1NIG8|I1NIG8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0199500 LjG1.1_chr5 49735424 49745816 +
2 domain predictions
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