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LotjaGi4g1v0151000.1

Overview

Field Value
Gene ID LotjaGi4g1v0151000
Transcript ID LotjaGi4g1v0151000.1
Lotus japonicus genome version Gifu v1.2
Description UBX domain-containing protein; TAIR: AT1G14570.1 UBX domain-containing protein; Swiss-Prot: sp|Q94JZ8|PUX7_ARATH Plant UBX domain-containing protein 7; TrEMBL-Plants: tr|I1MMM9|I1MMM9_SOYBN UBX domain-containing protein; Found in the gene: LotjaGi4g1v0151000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:24873422..24881805) extracted from Lotus japonicus Gifu genome v1.2.

CTAGGAGGTGAATCCACTACAAAAAATAAAAATCTTCATGGATGACACGTTTGGGATCCAAGATTTTGATTGAAGGATAA ACAAGATTTTGATTTTGTAGGATAAATGAAAAGGCTTTTTTGCTTGTACGAAGAGGCTATTATCTGTCTGTCTAGTAGGT TCAGCAAACTGACTGAACAACAATGCATCACGCTTCTTCGTTTTATGAATCTTGACCTTCCCTTCCACTTCGAAACCCTA ATTCCCAAATTCTCGACGAACGAATCGCACCACCGCATCGGAATCAATGGAGGGAGTGTTATCCGCCATTGAGCAACAGA GCATGGTCTCTTCCTTCCTCGAGGTCGCTCAGGGTCAGACCGCCGACACCGCCAGACAATTCCTCCAGGTTCACCACTTT CACTGTCACACTTTTTTCCCTGTTTTACTCCAAAAGTTTGGAACTTTGCATGATCAGTGGTTAAATCTGCAATTGGAAAA TACATGGGTTTTGAAATTTGTTTTTGGGTCCTGAAATTGTTGTCAATGGATTGTGATTTATATTGTTAGTTTTTTTTTTG CTGTGATCTATTATGCAGGGAAGCTCATCTTATGTGTTGTTGTGTAGAAAAGTGTTTTTGATGGGTATGGATTGAATGGG GGTGTATTATAGATTGTATAGAAGTTCAGTTTGGTGAGTGTTGTGTGAAAAACTTGTCTTGTCACTTGATTTTAAGGGCC AGACTGAGTGATGGAGAGTGAAACTAAATTAGTGATAGAAAGGCATGCATACATGCATTTTAACTGTGAAGCTTGATGCA TAGAATGTGATTGGGATCTATAAATTGTTGTCGTTGTAACAGGCCACGAGTTGGAAACTTGAGGAAGCTCTTCAGCTGTT CTTGATTGGTAATGAAGCTGGGGCAGTGCCGCCGCCTTCGTCACACACTCCGCCTTTAGAAAATGCTGATTCCTGGACTG ATCATCAAACTTCAAGGTAAAGTAGTGTGAACTATGATTTTGATATCGTCAATCAGCAGTCTTTTGTTGGTTGCTTTCTA ACTTGCGGTTGTTGTAGTGAACCAAGGAAGGATGCTGCAAATGAAAGTAGTGGCCATAATGATGGAGAAGATGTACGTCC TCCCTTACCTGTGATAAGGGAAACTCTTTATGACGATGCAATGCTGTTTGGGTATGTCTTACTCTTCCTCATTTATTTGT TTGCCTTGGAAACCAAAGGGTTTGCTGCAGATATTTAGTGTTTTTGTCTTTCTGTCATTCATTTTGATGCAAATGTGATT CCGTTAGGTCTTTCTGTCATTCATTTTGATGCAAATGCGATTCCGTTAGGTCTTAACTGTGATATCACTTAATTTCAACT ACAATGGCCTATCCTTGAAGAATGAAGTTCAGTTTTCCTAGCATTCCTTTAGTTTCATGTTCGTAGTTCATTAAATCACT AATCTTGGGATTATTTTTGTTTCTATGTATATTCAGTGTTTTTATCAGTCATTGGAACACATATCCATATAATAAGTAGT CCTTCTCCCTTTATCTATGCGTGGCTTTGTGGACTTTCTAATGATGAACTGCAGAGAGTAAGGTAAAAGAAAAGAGGAAT TGTTGTGACTGGGTAGACAGTCTGGTGATGATCTATTAAGAAGCGTAACACTGGCAACATGTAGATTGTTCCATAATATA ACTTAATATATACCTTGTGAAGCGATATTGAAGTCAAGAGCCAAGTAATACTTTTTTGGATACTTGTTTATTTAGGAAAT AATTTTATCTGTTAGTTGTGCTCAGTGAGTTTTTGAAGTTACTAAGCCTTATCTTTTGTTATTTTAGTGTATATGTGATT TTTTGAACGTCAAACTATTTATTTTTAATTGTATTTTGTCATGTTTATGCAGAGCATCAAGGTTTGGACAGCGTCCACAG GAACCAAACGCCCTAGTTGCATTTCGTAACTTTGAAGAGGAAATGAGACGTCCAGGGGTTTGGGAATCAGATCAAGGTGC TGCCTCAACACCTGAGAGTTCTCGTGATAATCTTGCTTCACTTTATCGCCCTCCTTTTCATCTGATGTTCAATGGTTCTT TTGACAAGGTAAATGTGCTTCTTAGTATAGTCTTTTCAGATTCTCTTAGAGGTGGAATTGAGTCAACCCAAGCTCAAGCT CAAGTTCAACCAATATCTGTTTATTCAATTTTGTTGGAACTTGAGCTTAATTATTATTTTTATGCTCTATTTAAATGCTG CTTGGGACTGGATGTTGGGCAACTAAAAATAAATGAGAAACTAATTTAGTGTCATGGAGCTGAGAATACTATGATTAATT AGAGGGTACACGAGACAGGATAGAGGTAGGAACACAACTATTAGGGAGAAAATTGGGGTAGCCCCCCTTGTAGGAAAGAC GGTAAAGTTGAGTCTTAGAGATGATTTGAGTATATGTGGAGTGTAGAGGCACCTATGAAGAGGGTTGATTTGGTGGCGGA TAATCCAGTCATTACTGTAGACGAAGATCAAGGAAAAGTATAGGCTAAATCATTAATATAGACTTATAGGTAGATGATAT ATTTGTGAATGATACATGACAAGGTATTATGGTGTTAACCCCACCTTGTGGTAAAAGACTTCGTTGTTGCTGTTGTTCAA TTTTAAAATGTCGAGTTAATTACACAAGATTTCCCTCTGTTTTATTAATTTTCACATACCCTCTCTATTTTAGAAGATAA TGAGATGTCCCGTAAGACCTTAGCGCTTATGTATGCATCTGTTAAATTTTTAAGATGCTCTACATACAAATTCATTTTTA TCATAGTGTGCTTCAAAATGAATATAAAAGTCAGGCTTGTCATTCCCGGATAGCGGCCGACCCAAAAGCAGATATAGCTG GCATCCATCTCTATATTACATAGGTATTTTTTTTTCTGTTTTTTGAATATTTGGGTACGTGCCAGCTCCATATTATCAAT CTTGGATAGTAGCATGGAGTACCCGAGCCCAAAAACACAATAGCAGGATAGTAGATAGTGGGATGGCCACTATCCTGAAG ATTATAATACAAAATAAATCAAGCTACACACATGTATATACGTATACATAAAATTTACTGAAAATTAATTATATTTGTAA TAAATAATAATGTGTCACAGCCTAAACACAATAACAATCAATCTAGGATGAATGAGAACATACCAAATAAATTAAAAAAG GAAAAAAGATGACGGTCACTCGAGATGTGTAGTGAAATATTGAAATAATGAAACATGCAATTGATATGCAGTTGAGTTGA CCATGGTTTGGTCTTTGAATACAGGCAAAAGGTGCTGCTTCCTTGCAGGACAAATGGTTATTGGTGAACATACAATCTAA CAAGGAATTCAGCTCACATATGGTATTGTATCTTGGTGATTCATTTACATTTTCTTGATTGTTTGTTTAAGCGATAGCAT TACTGGTGTATGTTTGCTTTGTTTAAGCATTAACATTACTGGTGTATGTTTGCTTTGTGAAGCTTAATCGGGATACATGG GCCAATGAAGCTGTTTCTCAGACCATCAGTACGAACTTCATATTCTGGCAGGTCAGTTTTTTGCGTTGTTGACTTGAATA GTGGTAGTTATTTCATTTTCTATGTAACTATTATTTCGCATGCTAGCTTTCCAAACAATTATAGTTGCTCTGTCTCTTGA ATCTTGATTACTGAAAATGACACTCTTGAATCTTGATAACTGAAAATGACACCGTAAGGCTGCCAGGATAATTGAAACCA TGCTTTATTAGGTTGTGTTGCTCACTTACTCTTACACATCCCTCTTTGTTTATCTCCTTTCAGTTTTTCTACTTCTGTTT GGGGTTTCTCAAGGACTGAGATGGCTGAGGGATTTTCTTTGACCAGGATTTGGAAAGAAATAGTGATTGTATGGTACTTA GTAGTGTGTGCTGCTTTAGGTTCTAGATGGGAGGGTTTGAGTCTTGGCAATTTGGCTTGCATAAACATTGCTCTGATTGT TCCACTTCAATTAGTGGGCAATTATTCTTAGTTGTAACTCATCAGAATTTCCAATGCTTAAAGTGATAGTATCTACAGCT TGCATCTGGGCTTTATTGTGATATTTGCAGCAGTATTTATTTCTGTTGGAGTGTGAAAACCCTAACAGCTGAGCAACTAT AGATAAGGGCAAATAGGTAATTTTAGTTAATAAAAATACTGAATCTAATTTGAAAATAGAAAAATAAAAGACACAAAGAA GGAAAATGCTTCTTTACTAGGGAAATCTATTATTAAATCCTTCTCTAAAGATATACTCTTGCTCCTAAAATATAAGATAA AAATAAACTAGACTCAGACCCACAAGACAACTGGGCTTAATATTTAGGACCCTAATAGTTTCTAATACTTAACACATGCT TTTATAGTAGATTTTTGTATTATATGCTGTTGTCCATCTTCAATTATTATTAATTTATTATTAATTTATTATTTTGCATG TAGGTGTATGATGATACAACTGAAGGCAAAAAGGTTTGTACTTATTACAGACTGGATTCTATTCCTGTTGTGCTTATTAT CGATCCCATCACTGGCCAAAAGATGCGTTCCTGGTCTGGAATGGTTCAACCTGAAAGCTTGTTGGAAGTAAGTGATACGA CTTTTTAACATACTATGATGGAAATTTTGTCTAGGGAAACCGAAACATCATTCATGTGTGAATCTTGTAGTCAGTTGTTT TTTACACTTGCTGATTTGATGAGTCTTGTGCTTTTAGGGTTTACTAGGATTCCTTGATGCTGGCCCTAAGGATCATCACA CTACCTTATCTCACAAGCGTCCTAGAGGAAGTACTAGCCCACCAAAAGCTAAAGGTTTGTTACTAGTCTCTATCTGTGCC AGTTTGTTCAGTGTCAGAATGTCTTGATGTTTATGGTGTGTAATTATTGTGTGATGTTTAATTATTTACTTCTTGTTGCT TATCAACTCTCCATATAGTTGATACCTTCCATATCTATTGAAATTAACCTTGCTCACACACCTTAATTCACTTCTGATCA TGGCATCTTCTTTTTTTCTCTTTTTTTTTTTGTATTGAAAATCTGTACTGCCTGAATACTGACGAAAAAATTATCTTGCA CACATTTTCATCACCATCCTGATCTTATTTGACATCAAAGTCATAGTAGATGAGAGTAAAGAGGAGGATGAGGAAGTTCA AAGAGCTCTGGCAGCTTCATTGGAAGGCATGACTGGAGGAGATAATATAGATGTTGATGTTGCTGTCAATCAGCAAGAAG CAGCCTTGCCAAAGAGGCCCACGTATCCAACCTTGCCTGAAGAACCTAAGGTTGAAAGAAATCTCCTTTGCAGAGTTGGT GTCCGACTTCCAGATGGACGCCGGGTTCAGCGTAACTTCTTACGCTCTGATCCTATTCAGGTAAGACATGATGCTCTCAT ATTCCTGTAGGAATTTATTGAACGGTATGCTGTCATTGGTTGTATGTATGACTTCTGCCATTTTAGAACTCCACAGCTGT GTGCTTGAGTGATAGAAGTACTAAGATGAGTGACCTCCTCGGAAGTTCTCGTGTTGCATCCCTTTCCTTAGTGGGATAAG GCTTTTGTTGTTGTTATTATTGTTGTTGTGTATGCTTTATATTTCCCTCTTCAAAGAACTGCTGGGTACGATTCTATATC TGCTTATGCTCTTGTGGTGCAACATCATTGTGAAATGGAGACTGTTGTGGAGGTTTATGATACTGAGTCTCTGGCCTTAT TAAATGTTACAAATTTTTTCAGTTCCTATGAATATAGCAAGGAACTTTGATTTTGGTCAATCTGTAGTTTGGGTTTAGTT TCTGTTCCCTATTTAAAAAAAATGACCGCATTTAGTCCTTATAATCGATGTAATTTTGTTAAGGGGTGATGCAACAAATG GAAAGCTAAAGCTACATCATTACTGAGCACAATAGTTAAGAAGGAATGTTTTTTGATATGTGCAAACTTGTCTGCTGGTT CTTCTTACTATTGGGTCTATCTGTGAGATGGAAGCTTTACACCTTAGGAGGATGTGGAGTGATCAGAGATTCGGGGCTCT GCATCAAAGTCCTTTATTCAACTTCAATAGAGACAACAAAGATAAGGATCAAAGCATCTGCAAAGTGATATGATTGCCGG GTTCGAGAGTGGTGATGACAGCCATGATCTAGATCTGGGCATCACCACCAAAGTTAATGATTTGGGCAATCTTCTGATAG GGCTGTGGGGACTGGAGTGGGTGATAAATTGGATCTTGGGGAAGATGGTTGATGAGCTTGTGTTGTGTGTTCTCATTCAT TTGTCATATCCCCGGATGCAATGTAAGATGTGGTGACGCATTGCATAAGAGATGTGAGGAAGGAGATGTGAGAAGGAGTA CATGTTACATACGTATGCCATTTTTTATGCATAGTTGTGATGACCTGATATTCTATTTTTTTCATCGTTTACTTAATTGA ATAATTTTAATGGTGAGGCTAAATGGGCTACTTTTAGACAACAAGGATAAGGATTAAAACAAAAAAGTGCACTATATAGG GATCAAGTCATGTTAGTCTTAAATTTATTATGCACACCCTTCTTGCATGATTTAATTATGCACTAAGATACTATTGGAGA GTTCATGAGTGTTTTATTTGATGATTGAGGGATCCATGGCAGTTATTTTACTAATGATAGGTGGATGGAAATGGTAATTA TCTTGGCCAGGTTTAAGGTTCTAAGGATTTTATTTTCTTAATTTGAAGGAGTGTTATGTTATTTACGAACTGGTGAATTC ACCGACTTCTTAAAAATGCATGATTCTTTAAATGTTTAAATCAAGTATTTGAGGTGATTTTGTGTTTGTAACTAGTTTAT TTATCTTTTTTGGATCATCTGAGTGACTCTTTGTTTCTCTTGCAGCTGCTGTGGTCATTCATTTCTGCTCAGCTAGGGGA AGACGAGACAAAGCTGTTTAGATTAACACAAGCAATTCCTGGAGCATCTAAGAATCTGGACTATGAAAGCAATTCAACCT TCGAGGAATCAGGCCTTGCTAACTCCATGATTTCAGTGACTTGGGACTGAGTTCAGATTCATTGGTAGGTTGAATTTTCA GACCTGAGAAATTCGGTTTGGTGATACCTATTTATATGGATCCCGTTTTTCACCTTTCGGTATGAGGCTAGTTTATATTC AGAGAAAACGGGAAGTTTTATTTAACTTTTTGTGTGTATAGACTATGAATCTGAATGATGGGTATCATTAACGAAAATAT ATCAAGGTTTTTAGTTCTCTCCTAATGCTTTGTTCGAAGACAAAAAGTTTACTGGACAAATGTTTGCTGGTACTCTGGTA GTAGTGACTTAACTTTGTCCGTTTGTGTTTTAATTGAAAAATTGGCTTCAGCGTGGAAAGCAGTTCTCCATGCACCCTAA TCATTAAGTGTTTTATTTCTTTGATGGAAGGCATGACATATATCACTTGAAAGGGATTAATATGTTGTCTTTTTAATTGT ATATACATAATCCAGATTATTTTATTTAAATTTCACTATGTACTATAATTATATGGTTACGACAATTCCCATGGAAATGT ACATTTATTTCATATTGAAGTTTTTTAAAGTTTATCTAAGCATATTTTACGATACAATATAAAATGTTTTGTTTAAGAGA AAAGAGAGAATAAGAGAAGATGAGTAGAGAAAAAGATGTGAGAAATAAAGTAGATTTTATAAGTTCATTGGCATATAGAC AGATAGAGGGAATGATGTGACTTTTCTCTCTTCGTTTGGTGTTTGGTTGGATAGAGTTTGGTGTTTGGTTGGATAGAGTA GAGAGAAAATTAACTTGGGTAAAAAGGCACTTTTACCTTATGTATAAAATATTATGTATGATTCAATATATAAATTATGA AGGGTAAAAAAAGGAAACTAGGGTAAAAAAGGAAACTAAAGAACATGAAGAAGACATGATATTTTATATGGTTCTCAATT TGAGAAGGAATTATGGTTATTCACCCCTCTTTTCCACCTCCACCTTAGATGAATAAGAAGAGAAAAGAGAAAAATTAGTG ATATGATATGTTATATGATAGGAAATGCATAAAAAGAAAAAAAAAGTGTGAAAATGAGATGGGAGAGAATGTGAAGTGAT AATGAATTATTGCTCTTTGAGAAGATTGCATTTAGGTGGTGGTAGGACCCACCATTTCAGTCGCTTTCTCCACTTGTAAG ATGCAAACCGAACAAGCGAGGAGTTCTATTTTTAGCTTAATGCTCTACCTTCTTTCTCTCTACTCAAACCATCTCTGAAC AAACACCATTAGTGTTTTAGGACTCGTTTTATGATAGTATGAACTTATGCAACACATTATGAGT 

CDS sequence (LotjaGi4g1v0151000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGGGAGTGTTATCCGCCATTGAGCAACAGAGCATGGTCTCTTCCTTCCTCGAGGTCGCTCAGGGTCAGACCGCCGA CACCGCCAGACAATTCCTCCAGGCCACGAGTTGGAAACTTGAGGAAGCTCTTCAGCTGTTCTTGATTGGTAATGAAGCTG GGGCAGTGCCGCCGCCTTCGTCACACACTCCGCCTTTAGAAAATGCTGATTCCTGGACTGATCATCAAACTTCAAGTGAA CCAAGGAAGGATGCTGCAAATGAAAGTAGTGGCCATAATGATGGAGAAGATGTACGTCCTCCCTTACCTGTGATAAGGGA AACTCTTTATGACGATGCAATGCTGTTTGGAGCATCAAGGTTTGGACAGCGTCCACAGGAACCAAACGCCCTAGTTGCAT TTCGTAACTTTGAAGAGGAAATGAGACGTCCAGGGGTTTGGGAATCAGATCAAGGTGCTGCCTCAACACCTGAGAGTTCT CGTGATAATCTTGCTTCACTTTATCGCCCTCCTTTTCATCTGATGTTCAATGGTTCTTTTGACAAGGCAAAAGGTGCTGC TTCCTTGCAGGACAAATGGTTATTGGTGAACATACAATCTAACAAGGAATTCAGCTCACATATGCTTAATCGGGATACAT GGGCCAATGAAGCTGTTTCTCAGACCATCAGTACGAACTTCATATTCTGGCAGGTGTATGATGATACAACTGAAGGCAAA AAGGTTTGTACTTATTACAGACTGGATTCTATTCCTGTTGTGCTTATTATCGATCCCATCACTGGCCAAAAGATGCGTTC CTGGTCTGGAATGGTTCAACCTGAAAGCTTGTTGGAAGGTTTACTAGGATTCCTTGATGCTGGCCCTAAGGATCATCACA CTACCTTATCTCACAAGCGTCCTAGAGGAAGTACTAGCCCACCAAAAGCTAAAGTCATAGTAGATGAGAGTAAAGAGGAG GATGAGGAAGTTCAAAGAGCTCTGGCAGCTTCATTGGAAGGCATGACTGGAGGAGATAATATAGATGTTGATGTTGCTGT CAATCAGCAAGAAGCAGCCTTGCCAAAGAGGCCCACGTATCCAACCTTGCCTGAAGAACCTAAGGTTGAAAGAAATCTCC TTTGCAGAGTTGGTGTCCGACTTCCAGATGGACGCCGGGTTCAGCGTAACTTCTTACGCTCTGATCCTATTCAGCTGCTG TGGTCATTCATTTCTGCTCAGCTAGGGGAAGACGAGACAAAGCTGTTTAGATTAACACAAGCAATTCCTGGAGCATCTAA GAATCTGGACTATGAAAGCAATTCAACCTTCGAGGAATCAGGCCTTGCTAACTCCATGATTTCAGTGACTTGGGACTGA 

Protein sequence (LotjaGi4g1v0151000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEGVLSAIEQQSMVSSFLEVAQGQTADTARQFLQATSWKLEEALQLFLIGNEAGAVPPPSSHTPPLENADSWTDHQTSSE PRKDAANESSGHNDGEDVRPPLPVIRETLYDDAMLFGASRFGQRPQEPNALVAFRNFEEEMRRPGVWESDQGAASTPESS RDNLASLYRPPFHLMFNGSFDKAKGAASLQDKWLLVNIQSNKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTTEGK KVCTYYRLDSIPVVLIIDPITGQKMRSWSGMVQPESLLEGLLGFLDAGPKDHHTTLSHKRPRGSTSPPKAKVIVDESKEE DEEVQRALAASLEGMTGGDNIDVDVAVNQQEAALPKRPTYPTLPEEPKVERNLLCRVGVRLPDGRRVQRNFLRSDPIQLL WSFISAQLGEDETKLFRLTQAIPGASKNLDYESNSTFEESGLANSMISVTWD 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF 1 452 452 2.4E-130
Gene3D 3 63 61 2.6E-9
Pfam 12 52 41 3.7E-9
PANTHER 16 452 437 4.0E-134
PANTHER 16 452 437 4.0E-134
MobiDBLite 55 102 48 -
MobiDBLite 76 101 26 -
SUPERFAMILY 159 293 135 8.78E-39
SMART 163 286 124 7.6E-46
CDD 175 287 113 1.41496E-52
Gene3D 177 288 112 4.9E-41
Pfam 179 259 81 4.4E-13
MobiDBLite 290 320 31 -
Gene3D 296 450 155 4.7E-12
SUPERFAMILY 360 451 92 2.84E-17
ProSiteProfiles 370 450 81 21.308
Pfam 375 442 68 1.6E-8
CDD 376 450 75 4.95343E-16

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0151000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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