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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006615
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 12 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.154s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0242399.1
n.a. PREDICTED: ubiquitin carboxyl-terminal hydrolase 26-like [Glycine max] gi|356554385|ref|XP_003545527.1| chr0 125699546 125701351 -
5 domain predictions
1 GO term
Lj1g3v4082060.1
n.a. PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like [Glycine max] gi|356571884|ref|XP_003554101.1| chr1 48310665 48321188 -
6 domain predictions
1 GO term
Lj5g3v0574430.1
n.a. PREDICTED: ubiquitin carboxyl-terminal hydrolase 26-like [Glycine max] gi|356554385|ref|XP_003545527.1| chr5 6746755 6758220 +
6 domain predictions
1 GO term
Lj5g3v1260880.1
n.a. PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like isoform 1 [Glycine max] gi|356576622|ref|XP_003556429.1| chr5 20089585 20097199 +
2 domain predictions
1 GO term
LotjaGi1g1v0657900.1
n.a. Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT2G40930.1 ubiquitin-specific protease 5; Swiss-Prot: sp|O22207|UBP5_ARATH Ubiquitin carboxyl-terminal hydrolase 5; TrEMBL-Plants: tr|A0A151TAP6|A0A151TAP6_CAJCA Ubiquitin carboxyl-terminal hydrolase 5; Found in the gene: LotjaGi1g1v0657900 LjG1.1_chr1 121845329 121856576 -
4 domain predictions
1 GO term
LotjaGi1g1v0657900.2
n.a. Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT2G40930.1 ubiquitin-specific protease 5; Swiss-Prot: sp|O22207|UBP5_ARATH Ubiquitin carboxyl-terminal hydrolase 5; TrEMBL-Plants: tr|A0A151TAP6|A0A151TAP6_CAJCA Ubiquitin carboxyl-terminal hydrolase 5; Found in the gene: LotjaGi1g1v0657900 LjG1.1_chr1 121846294 121856340 -
4 domain predictions
1 GO term
LotjaGi1g1v0657900.3
n.a. Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT2G40930.1 ubiquitin-specific protease 5; Swiss-Prot: sp|O22207|UBP5_ARATH Ubiquitin carboxyl-terminal hydrolase 5; TrEMBL-Plants: tr|A0A151TAP6|A0A151TAP6_CAJCA Ubiquitin carboxyl-terminal hydrolase 5; Found in the gene: LotjaGi1g1v0657900 LjG1.1_chr1 121846294 121856361 -
4 domain predictions
1 GO term
LotjaGi5g1v0064500.1
n.a. Ubiquitin carboxyl-terminal hydrolase; TAIR: AT3G49600.1 ubiquitin-specific protease 26; Swiss-Prot: sp|Q9SCJ9|UBP26_ARATH Ubiquitin carboxyl-terminal hydrolase 26; TrEMBL-Plants: tr|I1M9Q7|I1M9Q7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0064500 LjG1.1_chr5 10814296 10825566 +
3 domain predictions
1 GO term
LotjaGi5g1v0064500.2
n.a. Ubiquitin carboxyl-terminal hydrolase; TAIR: AT3G49600.1 ubiquitin-specific protease 26; Swiss-Prot: sp|Q9SCJ9|UBP26_ARATH Ubiquitin carboxyl-terminal hydrolase 26; TrEMBL-Plants: tr|I1M9Q7|I1M9Q7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0064500 LjG1.1_chr5 10815208 10825105 +
3 domain predictions
1 GO term
LotjaGi5g1v0064500.3
n.a. Ubiquitin carboxyl-terminal hydrolase; TAIR: AT3G49600.1 ubiquitin-specific protease 26; Swiss-Prot: sp|Q9SCJ9|UBP26_ARATH Ubiquitin carboxyl-terminal hydrolase 26; TrEMBL-Plants: tr|I1M9Q7|I1M9Q7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0064500 LjG1.1_chr5 10815208 10825105 +
3 domain predictions
1 GO term
LotjaGi5g1v0200600.1
n.a. Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT4G10570.1 ubiquitin-specific protease 9; Swiss-Prot: sp|Q9ZSB5|UBP10_ARATH Ubiquitin carboxyl-terminal hydrolase 10; TrEMBL-Plants: tr|I1NIH9|I1NIH9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0200600 LjG1.1_chr5 49955406 49966629 +
4 domain predictions
1 GO term
LotjaGi5g1v0200600.2
n.a. Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT4G10570.1 ubiquitin-specific protease 9; Swiss-Prot: sp|Q9ZSB5|UBP10_ARATH Ubiquitin carboxyl-terminal hydrolase 10; TrEMBL-Plants: tr|I1NIH9|I1NIH9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0200600 LjG1.1_chr5 49955739 49966127 +
4 domain predictions
1 GO term