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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0574430 |
| Transcript ID | Lj5g3v0574430.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ubiquitin carboxyl-terminal hydrolase 26-like [Glycine max] gi|356554385|ref|XP_003545527.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | – | – | |
| Phobius | 6 | 35 | 30 | – | – | |
| Phobius | 36 | 619 | 584 | – | – | |
| ProSiteProfiles | 50 | 142 | 93 | 10.883 | ||
| Gene3D | 57 | 137 | 81 | 5.70E-09 | ||
| SMART | 68 | 144 | 77 | 1.10E-11 | ||
| SUPERFAMILY | 69 | 140 | 72 | 2.22E-14 | ||
| Pfam | 73 | 137 | 65 | 4.70E-07 | ||
| ProSiteProfiles | 157 | 259 | 103 | 9.551 | ||
| ProSiteProfiles | 285 | 405 | 121 | 10.083 | ||
| MobiDBLite | 495 | 515 | 21 | – | – | |
| Gene3D | 510 | 574 | 65 | 3.60E-05 | – | |
| SUPERFAMILY | 512 | 578 | 67 | 7.83E-08 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Thiol-dependent ubiquitin-specific protease activity | Catalysis of the thiol-dependent hydrolysis of a peptide bond formed by the C-terminal glycine of ubiquitin and another protein. |
Expression pattern of Lj5g3v0574430.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0574430.1, powered by CORGI.
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