Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR007033
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.634s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v4699730.2
n.a. Family of Uncharacterized protein function isoform 1 [Theobroma cacao] gi|508716248|gb|EOY08145.1| chr1 56030917 56033379 -
2 domain predictions
 –
Lj1g3v4699730.3
n.a. Family of Uncharacterized protein function isoform 1 [Theobroma cacao] gi|508716248|gb|EOY08145.1| chr1 56030917 56033379 -
2 domain predictions
 –
Lj3g3v1133730.1
n.a. PREDICTED: RAB6-interacting golgin-like [Cicer arietinum] gi|502083645|ref|XP_004487521.1| chr3 15401783 15404156 -
2 domain predictions
 –
Lj5g3v1770490.1
n.a. PREDICTED: RAB6-interacting golgin-like [Cicer arietinum] gi|502118280|ref|XP_004496189.1| chr5 25178444 25180448 -
2 domain predictions
 –
LotjaGi1g1v0679100.1
n.a. RAB6-interacting golgin (DUF662); TAIR: AT2G36410.2 transcriptional activator (DUF662); Swiss-Prot: sp|B1H222|GORAB_RAT RAB6-interacting golgin; TrEMBL-Plants: tr|I3SUV0|I3SUV0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0679100 LjG1.1_chr1 124590070 124593022 +
3 domain predictions
 –
LotjaGi1g1v0679100.2
n.a. RAB6-interacting golgin (DUF662); TAIR: AT2G36410.2 transcriptional activator (DUF662); Swiss-Prot: sp|B1H222|GORAB_RAT RAB6-interacting golgin; TrEMBL-Plants: tr|I3SUV0|I3SUV0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0679100 LjG1.1_chr1 124590165 124593042 +
3 domain predictions
 –
LotjaGi1g1v0679100.3
n.a. RAB6-interacting golgin (DUF662); TAIR: AT2G36410.1 transcriptional activator (DUF662); Swiss-Prot: sp|Q8IWB1|IPRI_HUMAN Inositol 1,4,5-trisphosphate receptor-interacting protein; TrEMBL-Plants: tr|I3SUV0|I3SUV0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0679100 LjG1.1_chr1 124590165 124593042 +
3 domain predictions
 –
LotjaGi1g1v0679100.4
n.a. RAB6-interacting golgin (DUF662); TAIR: AT2G36410.2 transcriptional activator (DUF662); Swiss-Prot: sp|B1H222|GORAB_RAT RAB6-interacting golgin; TrEMBL-Plants: tr|I3SUV0|I3SUV0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0679100 LjG1.1_chr1 124590552 124592198 +
3 domain predictions
 –
LotjaGi2g1v0155500.1
n.a. RAB6-interacting golgin (DUF662); TAIR: AT3G52900.1 RAB6-interacting golgin (DUF662); Swiss-Prot: sp|Q54KI4|EPS15_DICDI Epidermal growth factor receptor substrate 15 homolog; TrEMBL-Plants: tr|C6TNA2|C6TNA2_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0155500 LjG1.1_chr2 55443755 55447000 +
3 domain predictions
 –
LotjaGi3g1v0174200.1
n.a. RAB6-interacting golgin (DUF662); TAIR: AT2G27740.1 RAB6-interacting golgin (DUF662); Swiss-Prot: sp|B1H222|GORAB_RAT RAB6-interacting golgin; TrEMBL-Plants: tr|I3S567|I3S567_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0174200 LjG1.1_chr3 24130538 24133535 -
3 domain predictions
 –