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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR007042
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.051s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0104559.1
n.a. PREDICTED: serrate RNA effector molecule-like [Glycine max] gi|356510406|ref|XP_003523929.1| chr0 44776260 44786721 +
2 domain predictions
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Lj3g3v0797560.1
n.a. PREDICTED: serrate RNA effector molecule-like [Glycine max] gi|356510406|ref|XP_003523929.1| chr3 9622994 9632050 -
2 domain predictions
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Lj3g3v0797560.2
n.a. PREDICTED: serrate RNA effector molecule-like [Glycine max] gi|356510406|ref|XP_003523929.1| chr3 9624847 9632050 -
2 domain predictions
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Lj3g3v1739290.1
n.a. PREDICTED: serrate RNA effector molecule-like [Glycine max] gi|356510406|ref|XP_003523929.1| chr3 21988426 21996841 +
2 domain predictions
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Lj3g3v1739290.2
n.a. PREDICTED: serrate RNA effector molecule-like [Glycine max] gi|356510406|ref|XP_003523929.1| chr3 21993174 21997642 +
2 domain predictions
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LotjaGi3g1v0101300.1
n.a. Serrate RNA effector molecule-like protein; TAIR: AT2G27100.1 C2H2 zinc-finger protein SERRATE (SE); Swiss-Prot: sp|Q9ZVD0|SRRT_ARATH Serrate RNA effector molecule; TrEMBL-Plants: tr|K7KJV0|K7KJV0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0101300 LjG1.1_chr3 12547240 12556731 +
2 domain predictions
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LotjaGi3g1v0101300.2
n.a. Serrate RNA effector molecule-like protein; TAIR: AT2G27100.1 C2H2 zinc-finger protein SERRATE (SE); Swiss-Prot: sp|Q9ZVD0|SRRT_ARATH Serrate RNA effector molecule; TrEMBL-Plants: tr|K7KJV0|K7KJV0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0101300 LjG1.1_chr3 12547356 12556620 +
2 domain predictions
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LotjaGi3g1v0307600.1
n.a. Serrate RNA effector molecule-like protein; TAIR: AT2G27100.1 C2H2 zinc-finger protein SERRATE (SE); Swiss-Prot: sp|Q9ZVD0|SRRT_ARATH Serrate RNA effector molecule; TrEMBL-Plants: tr|A0A151R5X6|A0A151R5X6_CAJCA Serrate RNA effector molecule isogeny; Found in the gene: LotjaGi3g1v0307600 LjG1.1_chr3 65202134 65212494 -
2 domain predictions
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