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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0101300 |
| Transcript ID | LotjaGi3g1v0101300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serrate RNA effector molecule-like protein; TAIR: AT2G27100.1 C2H2 zinc-finger protein SERRATE (SE); Swiss-Prot: sp|Q9ZVD0|SRRT_ARATH Serrate RNA effector molecule; TrEMBL-Plants: tr|K7KJV0|K7KJV0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0101300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:12547356..12556620) extracted from Lotus japonicus Gifu genome v1.2.
TTAATGTGACTAGATAAGAGAAGAGGACACACCCGAATCACTTTTTCTTCTTCATTCATCCTCTTCTTCAGTTATTAGGG TTTCTGCACTTTCTCCCCTTCACTCCCATTTTTCCAATTCTACCCTTCTCCACTTCCCATGGCGGAGGTAATCAACTTGC CACCCGAATCTCTCGATCGATCTCCCTCCGCTTCCGCTCCTCCGCCGCCACCGGCGGCTCCACCTGCTCCTATTCCTCCT ACCTCATCCTCCGCTGCCGATGACGATCTCCCGCCGCCTCCTCCCCCTCGCCGGAGGGACCGCCGTGACGACCGTGATTT CGACCGCCCCCGCGGCGGCCGGGATTACTACGACCGTGATAGGGACTTCAAGCGCCGCCGCAGCCCTAGCCCTGGCTACC GCGATCGCCGCCATTCCCCTCCCCGACGTTCACCGCCTCCGTATAAGCGATCTAGAAGGGGCAGCCCCCGCGGTTATGGA CCCGATGACAGGTGATCATGCTAAACTTCGCTGATTCATAACGATTAGGGCACTGATTTAAAAACCATTTCGTAACTTCA ACTTGTGTGTTTATGATCTATGGTAGAGTCATTTCCATGTATATATCTTGTTTATCTGGTTAGGGAAACTTGTATTAATT CAATTCTGAACAAGTGTTGTGTTCAGTTCAGTTTTTTTGTTTGTTGGGATTGTAGGATGCAGTGGTTTTTTTACCTCACT CTCTGATACACTGATTGTAAGTAAATTACTAGTGATATCATGCCCCGGAACTCGATAGAAAGCATTTTATAAGTACAATT TTATTATGAAACTTGACCTTCTTTTTAGTGATTCAAAGTATAGGGCACTTGATATGGAGATCCTTGTGTGCTGATGATGT ATAAATAGGTCATGTATATATCTTATTTATTTTTCTATAAGCGCCCTCGAATCCTCGATATCAAGACCCTTGTGTTTAAA TAATTTGCCCACTTTCATGCGATCGTGGATACACATTAGAAGGATTTTGTTCTTGATGTTTGTTCTAATATGAATTTCGT TTTAGAGTGTCCGTTTAATATGTTTGTGTTTCCTCTCACATTTGTATGTTGTTTCGTCATATCTTATTACCAATGGTTGT TCATCATGTATTATGCTAATATTTTTTCCATTAATTTTCTTTATTATCTGAGTAAATCAGGTTTGGACATAATTACTCTG GTGGCTATGAACGGGGAGTGGGTGGAAGGACTGGTTACGCAAATGAAAGGTCGTATGGCAGGTTTGGACATCGATCTGCT GGGGGATTTCAAAATGGAAATTCTGGTAGGTAATTGTTGCTTAGTAATAGGTTTTTTTGTACATAATGTAAATGCCATTT ATCGACAGCTTTAGTTCTAGTTTATTCTTTTAAGTGAACTAATTTAAACAGATCACAACCACTTTTGAATACTAATTATG TAGACATAATAACCTATGGGTTTCTTTTCACGCTCTTCTATTTCATGGTTTCTGCATTGAAATTTGCATGTTGTTAATTG TGATGAATGTTAAATTGGTAATGTTATTGCTCAGTGCAACCTGTCTAACTTGTCTGAATAGTCCTGTTATTTTTATTATA TAGAATGATATAAACTGCGCAGAAACTAATTAGGGATTTATTCCCATTTATGTACAAAAGTTGCTCTCTCCCTATATTTT CTTTATAGAGCCACTATATCCGCTATTTGTGGTCCAAAACATCTGTTTGTTTTTTTGTTGGGGGGGGGGGCAGATCCAAC AACTCATGAATTTTACAACCCCTTTGAGCCCTATTCTGTTGTGTTCTCTTACATGTGTTGCCATTATCCCTTTGTTCTGC TCCTTCTTGGTAGCTTCAAACAGTTGAGTAGTGGTTTGACGTATAGGTTGCTTGGTTTGATGTTGGCTAGGTTGTTTGAA CTTTGATGTACTTCTATGCATAGTTATCAGTATCTTACGATACTGCAATATGTATCTTGATATGATACAAATTCTTGAGG CAGCGATATGTATCTCAGTTCTTAAAATGAGCCTGAATCCCATTTTGTATCTCCGAGTCAAGCTTAATCTTGAGATTCAC GATTCGTTATTGAATCTTATGATTCAAAGTTGCGTGCAAGTTACACATCAGTCGGGTCAGGTTGCGTGACCTGTACAGGT TTCTGATGCTTTTTGGGAAAATTTCTTGAAGTTTTTTAAAAAAAAAAAGCAGATATAGCTCACTAGTATTCCTCCAAAAA AGCCCATGCGCATTGTCAGAAAAATAAACCCTACTTTGGTTGTCATTAGTATGATTCATGTGGCATTTCGGGCTCACTAA TGAAACGTGTCTCCTTTGTTGTTTTTTTATCGGTTCCGGTCCCCCTGTGCTTCTCGTCACTTATCTTCATCTCCTGCTGT GATATTTGTTTACTGCTGCACTGCAATTTTTGGAGGGGTTGAATACTTAAACTTTGTGCAAGAACCCACCATTTTTCTTC TTATTTTGATATATGATTTGGATCTTGTATTATTTTAAGGTTTATTATATGATATATCAGCTTATGTTTCAATTTATTAA TTGTGTTTTTGTATCATGTATCTAACTATACATAAAAAGATTCGATTCACGATTCGGAAAATAGGGCTTCCAATTCATGA TTCAAATCTTGATTCAATAACCATGCTTCTGGGTGGTAATTGGTTCATTTGGGTGTGGGTTGTGGTTCATGTTGTCTGGG TTGTTTGTATCATGTGTGTGCTGTTTTGACCCGTTCCCTTTTTGTCTGTTCTTGCTGCTACTTGGTGGTGATTTGTGTGG GCTCAAAGCACTGCTTTGTTTTACTCGGTGGTTCTCTGTTTTCCTGCCTCTTGTTCTACTTGGTGGCTTCAAACACTGAT CTATATAAGTACATACGTTCATTAGCCATGATCCATGATACATATTTTATTTAATAGATGTCATTGTGTTATCATAGCTA AGGAAGGCATTGTAGTTGTGTATAATTATATATTATATATTATGTAATCTTAGGTAGGATCTGGATTTTGACTACCTTCG ATGTTGCAGTTACTCTAATTAGGGTTGCTACATGTCCTATTAACACAAACAATTAGACAGTTTTGTAATTTTAATTTAAT TATGATGTGTTATAATGGTGAAATCTAACACGGAGTTTACGTAAAGCTTATTTAAACTGGCACTGCATAGTCATGAACCA CTATTTTTATATTTTGCTTGAAGTATAATATTATAGCGATCAATTAATTGGAGAAGGTTTGTCACAGAGCAACTAATAGG AACTGTCAAGAGTGTCCACATTTTGCTTTTCTAGATAAGGTCAACTAACTGTTAATATATTCTTATGTTATGAGTTCATT TTGCAGATGTGGATATGAATCGTGGTTATTCAGATTTGCCAAGTGGAGGTGCACAAAGGTCAGCTTCCTACTTATTCATT TAATTCTTGTTAATCTTTTAATTTAAAACCATGAATGGCCTAATATCACGGCTCTTGGCCATAAAGACAAATTTCCCATT GGGAAGATAGTTGAGAAAGGAGCTATGGTGAGCATGCCAATATACTTTTAAAACATTGAAGGATCTGAAACATGAGATCT ATAGGTGCTGTTAAGTGGGCGGTTTCAATTGAAGATGCACCTTGTTACAGTGATTGTACAAGGCCAACTCCTGATCTTCT CAACTATTTGTTAATTCCATTTTGGAGATGAGATTAATGATTATGGATGTTCTTATATCAACACCCCAATTTTCCATTAG TGATAAATGGGCATATGAAATTCAGATAGAAATACAGTCTGTGATGAACAAAGTACTGGATCAAAATCTTGTGCAAGTAC AAGTGGCTTTCAAATAGAAGATAGCATTTTTCAAAGGAAATTTAGAGAAGAAGCCAGTCTGTCATCGCAAGTAAATTTGT GGAAAGTACCAGAGGACACTTGTTGTCTAAGAACACTAAGGGTCTGTTTGAGAGAAGTGGGAAAGAGGGGGAAAGACTAC AAAATGTAGTATGCTTTCTCCCCCCTTTCTCACTTTCCCACTTCTTTCAAACAGGCCCCGAGTCTTCTTTGCTGGATGGA GCTTTATAGCATTGGTTATTTACGTTGTGGAAAGATGGGTTTCCGCAGGACTGCTCTTTGAATTTCTATTTTGAGCTTAT AAACAAAACTATATTTGATTGTGCAAATAGTCTGGACAAGATACTAGTGAAAATGGAAGTATTGCGAGTGAAAATGTCAA CAAAAGTATCCATGAGAAAACAATTTGCATTCATGAATGAGTATTCTGTGTGTGAGGTTTGAAATGACTAGACTGCATTT ATTGATTATATTTTCTGTAAGTTTTCATTTTTTAATTTATCAAAGAAGCTCCATTGTAGAGTCTTGAAAGGTTATTGTAG TACAAACTTAACTTTCACATTACCTTCGAACTACTGTTGTATACCATATGCGGTATTTTTTCCTGTTAAAATCTGCCAGA GCTTTAAGATTGAAAATATGATTATGGTATGATATCTACCAAAGTTTATACCATAGTTGAAATTGACCCAATGTCAAATT TATTCTTTCTTTATCTCTAGCTTGCTCACTCTACTTTTTCTATTTCATCCTTTTGGTTTAAATTTCTGCGCTTGAGTCTC TCTGTTGATTCGTTTGCTGACTTTGCTTGGTTTTATTTGCTATCTCTGTTTCGATCTGTCTCATGCTTATTTTAATCTTT TGTCTCTTCTGCTTTTCCCCCATAACTCTAACGACCTCCCTTGACCACGAAAAAAGAAACTTTCCCCTATGCATCTTTAT TTTCTTGTTACTATGATCTTTCTGTTCTTCGCTTTTGTTTGTATCTGACTGACCACTATTAAACATAAAATAGTTGTTGA CATATTAATAGTTCAGTAACTATGAAATAATCATCTAAGTTATTTACTTGAGTTTTAATGATACTTTACAAGTAGTAGTT AATTATAATATCACTTTTTATATTAAATATATTTATATAATTTTTGGAAGATCTTTTGATCTGTTTTACGATTCTAAGTG TATTAAATATATTTAATTATAATATCACTTTTGATCTGTTTACTATTTAATATCACTTGGTTGTTTAAAAGACTTGGATT TTGTCCTTTTCTTGAACTTAAGTGAGGAATCCTACAGGAGAGAAGTTCTGCTACAAATGTAGTATTCCTAAATTCAAAAT CCTGTTAGCAGTTAATATTCATTTTAAGCATTACCTAATTTTCTAGACAAACTGAGTTGAAACTTTGTAACAAATGGTAT TTGTTTTTACATAATTCCTTTTCCTTGTCACTTGAAATCTATGGGTAAACCTCATGTCAAATTGAAGGTCTGTCCTGCAT GCTGTCACAGAGTTTGGTACACATGCATGATATACTCTTTTCAGCATGCAATTGTATATTGTTCCTGTTCTGATAACTTC TGTTATATTTCATACCAAAGTGTGGCTTCCATTTTCAGTTTTATCAATAAATAGAAAAAGTAAGTATTAGATTTATCGTT TGAAGTACCTCTTTTCGTTCCTTTTTCGGGTTGTTATGGAGGTTTCACTTTTAATATGTTGATTGTCATTGCTGATTCAT GGAATGTGGGTTGCCTTTATTTTACCCTATTGACTGTTTGATCTTTTTGGGGTCGTCTGTTAAGTGTTAACTTGAAAGAT GCTTGTAAAATTTTCCAGAGAGGGGTTGATGTCCTATAAGCAATTCATTCAGGAGCTTGAAGATGATGTACTGCCTGCTG AAGCTGAGCGTAGGCAAGTTTTAGAAAATATTGTTTGCATTGTGCCTAAGCTCTAAGTACTGAATAATTTGTGGGATACT TGCTGACAAATGATATGTAATCTACTTTTCTAGGTATCAAGAGTACAAATCAGAGTATATTTCTACTCAAAAACGAGCTT ATTTTAATGCTCATAAGGATGAGGAGTGGTAAGGGATTTTTTTCCACTGCGAAAATTTCATTTGATTCTCGAAAATATGT AATGTTCACTTTATATAGTTTGAATTACCATATCGTTTTAAGTACAAAAAGTCTCGTGTTCCCTTATTTGATTTCAATTT ATATGTAGGTTGAAAGACAAGTATCATCCAACAAATTTACTTACAGTGATTGAAAGGTGAGTTTATGCAGAACTTTTGTT CAATGAAGAGCCGAACATACCATCCTCTTCATATTGATGGGTGGAATACTAGTATTTTTCTTGTATACTTTCTTTATAAT ATATTACTATTATGATGAAGGTATCTTAACCAATCATATCTGACACTTATCTTTTAGGAGGAATGAAAATGCACGACGAG TGGCAAAGGATTTTTTGCTTGATTTGCAAAGTGGAACATTAGACCTGTATGTTCTTGTCCTCCCTCACTATGTCTGCCTG CTCTTCCCCCTCATGCTTTTAGTATTCTTTGAATGATAAGAATACTTTGATCAATGCAGGAATTCTGGGTTAAACTCTTC TCCACCCAATAAATCAGGGCAGGCCAGCGAGGGAAATTCAGAGGAGGAAACAGATGCTAGTGGTAAACGAAGAAGACATG GTAGGGGATCCAATAACGATAATGATTTCTCAGCTGCTCCAAAGGCTCACCCTATTAGTTCTGAGGCTAGACGCATCCAA GCAGATATTCAACAGGCTCAGGCTGTTGTTCGTAAGCTTGACATCGAAAAGGGGATTGAAGACAATATTTTATACACCAG TGATCAAAGTAAAAATGATGATAAGGCTCACAGTGGGTCTGTGGGCCCCATAGTAATTATCCGGGGCCTAGCATCTGTTA AGGGCTTGGAGGGTGTTGAGCTACTGGACACTCTTATTACATATCTTTGGCGGATTCATGGTATTGATTATTATGGAATG GTGGAGACTAATGAGGCTAAAGGTTTTAGGCATGTGAGACCAGATGGAACCGGGCACGAAGAAGCAAGTAAATCAGGGCC AGAATGGGAGAAAAAACTTGATTCATTTTGGCAGGGAAGGTTGAATGGTCAGGATCCCTTGGATGTAATGACTGCTAAGG AAAAGATAGATGCTGCAGCGACCGATTTTTTGGATCCACATGTTAGAAAAATAAGAGATGAAAAGTATGGATGGAAGTAT GGTTGCGGAGCTAAGGGCTGCACAAAACTTTTTCATGCATCTGAGTTTGTGCATAAACATCTGAAGCTAAAACATCCAGA GCTTTTGATGGAACTAACGGCAAAATTGCGGGAAGATCTTTATTTTCAAAATTACATGAAGTAAGTATCAAATTGATACT ATCAATTGAGGCTTCTTTTATTTGGTGTTTAATTTTGCAAGTTTTGGTGGAAATATCACTCACAGTGGCCTTACTATCAT TGTAGTGATTCTAATGCACCTGGTGGAACACCTATCATGCAGCAACCTCAGGTAAACTAGTGATTTTATTTACTACTATA CGAGCTATTATTTTTTATTTGATAAAACTCATCTTTTGAAACTATATAACCTATTCTGCAAGTGGTTGCTGCATGTTTTG AAAACATTTTGGTGTCTTATGCATCCCTAATATGGCATTTTAGCAACCATTGCCAGATGGGATCAGCACAGTTAGTGATG CACATGTGTTTCCATAATAGAGTCGGTTAGGGGCTGTCCTAGTTAGTTACCCTTGTGTCTATATAAACAAGGTTAATGCT AAATGATATTAATATTACTCTCTTTCTCTTATTTCTTTTTTCTTTCTGTTCCTTTACTCTCTCTCTCTCTCTCTCTCTCT CTCTCTTGCTCTTTCTATTTCTGAACCTATCAGTTAGTGTTTAGCAATTTCTTTAATTTCTCTAAATGTATGTTGCTGTC CATGGTCCAAGCAATTTATGCGTCAACCTTCAGGAATTGTTTGATTTTCAAGTGCTCATTATTGATCTTCTCTCCCTCCC CCCCCCCCCCTTTTCTGTAGAAGGACAGGACTCTAAAGCGTAGATTGCTTGATGCCCGATTGAAAGATGATAGGGGTAGT CGACGAGACATGGATAAGAGTGATAGAATAAATGGAGATAGGCCTGACAATTCTCCATCCCGGGAAAGGCAACGGGGAAA CCATGATGAAGGCGAAGCAATGTATGATTCATATGGAGGGCCTGCTGTACCTCCATTTACCTCAGATATGCCCCCTCCTC CACCAGTTTTGATGCCTGTACCTGGTGCTGGGTTGGTTGCCGTTCCTATTTTTCTCGTAAATCTATCAAGTTAGTTGCTT TATTGATATTTCGTTGGTGCTTATAATTTGGAACTTTACAGGCCTTTGGGACCCTTTGTTCCTGCTCCACCAGAGGTTGC AATGCAGATGTTTAGGGATCAAGGAGGTCCATCTTCATATGATCCATCCGGAATGAACATGCGATCCGGTCCTCACATGG GTGGACCTGCACCAATAATGGCTGTTCCTCCAGGATTTAGACCTGATCCGCGACGAATGCGAAGGTAATTTATAATGCAG GACCCTTGTTCAGATGTTCCCTTATGTTATCTCCTCCAAACCCTACCATATCTCTTCTTCGCTGCTTGTATATGTAATCT TTAGACCTTAATTGCCATGTCCTTTTTACTTGGCCTGAGAATGCATTTTGTATCATCTATTAGTCAAATTCTTTATCCAT TTCCTTACATATCAATTTTATGTTGATGTTATTTATTTTTTACTTTCGAAAGGCAAGTTCATTCTTAGAAAGCTCCTTTT ATTATTTCGTTAGCTATTTTACCCTGAAAATATGAAAGTTCTTTGAGAATAGCAATAATATGCTCAAGGATATCCTTGAA CTAAAGATTAGGACTCCCAACTCTATCTGGGGATATTCAATTTTCTCTAGCATGTACTGATTTTCCCAATGTTGTGCAGT TATCAAGATTTGGATGCCCCAGAAGACGAAGTCACTGTGATAGACTATCGGAGCTTGTAGGTATGACTGAGTTTGGCTGA GTATCTCTAATTTCAATGGCATTGGGTAGGCAGCATGTTTGTTCCTGTCAATGAGAGCAGCAGATTAATAGTACTAATGG GTTCAGGCTTTCGTTTGTTTAGTGAATTTGCTACTTTGATGTAGGTTGAAAGATAATATTTGTTCAGATTTTTAGATTTC TTGACCAAAATGCCATCTGACTGGTCGGCCTACTTTCAATTGACGATTGTATTTAAATTTAAGGCTGAATTATTTGTAGA GATACAAGCAAATATAAGACCTTATCCCCCTCCCCCCAAACAAAATACAATGACTGATTTTACTT
CDS sequence (LotjaGi3g1v0101300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGAGGTAATCAACTTGCCACCCGAATCTCTCGATCGATCTCCCTCCGCTTCCGCTCCTCCGCCGCCACCGGCGGC TCCACCTGCTCCTATTCCTCCTACCTCATCCTCCGCTGCCGATGACGATCTCCCGCCGCCTCCTCCCCCTCGCCGGAGGG ACCGCCGTGACGACCGTGATTTCGACCGCCCCCGCGGCGGCCGGGATTACTACGACCGTGATAGGGACTTCAAGCGCCGC CGCAGCCCTAGCCCTGGCTACCGCGATCGCCGCCATTCCCCTCCCCGACGTTCACCGCCTCCGTATAAGCGATCTAGAAG GGGCAGCCCCCGCGGTTATGGACCCGATGACAGGTTTGGACATAATTACTCTGGTGGCTATGAACGGGGAGTGGGTGGAA GGACTGGTTACGCAAATGAAAGGTCGTATGGCAGGTTTGGACATCGATCTGCTGGGGGATTTCAAAATGGAAATTCTGTT CATTTTGCAGATGTGGATATGAATCGTGGTTATTCAGATTTGCCAAGTGGAGGTGCACAAAGAGAGGGGTTGATGTCCTA TAAGCAATTCATTCAGGAGCTTGAAGATGATGTACTGCCTGCTGAAGCTGAGCGTAGGTATCAAGAGTACAAATCAGAGT ATATTTCTACTCAAAAACGAGCTTATTTTAATGCTCATAAGGATGAGGAGTGGTTGAAAGACAAGTATCATCCAACAAAT TTACTTACAGTGATTGAAAGGAGGAATGAAAATGCACGACGAGTGGCAAAGGATTTTTTGCTTGATTTGCAAAGTGGAAC ATTAGACCTGAATTCTGGGTTAAACTCTTCTCCACCCAATAAATCAGGGCAGGCCAGCGAGGGAAATTCAGAGGAGGAAA CAGATGCTAGTGGTAAACGAAGAAGACATGGTAGGGGATCCAATAACGATAATGATTTCTCAGCTGCTCCAAAGGCTCAC CCTATTAGTTCTGAGGCTAGACGCATCCAAGCAGATATTCAACAGGCTCAGGCTGTTGTTCGTAAGCTTGACATCGAAAA GGGGATTGAAGACAATATTTTATACACCAGTGATCAAAGTAAAAATGATGATAAGGCTCACAGTGGGTCTGTGGGCCCCA TAGTAATTATCCGGGGCCTAGCATCTGTTAAGGGCTTGGAGGGTGTTGAGCTACTGGACACTCTTATTACATATCTTTGG CGGATTCATGGTATTGATTATTATGGAATGGTGGAGACTAATGAGGCTAAAGGTTTTAGGCATGTGAGACCAGATGGAAC CGGGCACGAAGAAGCAAGTAAATCAGGGCCAGAATGGGAGAAAAAACTTGATTCATTTTGGCAGGGAAGGTTGAATGGTC AGGATCCCTTGGATGTAATGACTGCTAAGGAAAAGATAGATGCTGCAGCGACCGATTTTTTGGATCCACATGTTAGAAAA ATAAGAGATGAAAAGTATGGATGGAAGTATGGTTGCGGAGCTAAGGGCTGCACAAAACTTTTTCATGCATCTGAGTTTGT GCATAAACATCTGAAGCTAAAACATCCAGAGCTTTTGATGGAACTAACGGCAAAATTGCGGGAAGATCTTTATTTTCAAA ATTACATGAATGATTCTAATGCACCTGGTGGAACACCTATCATGCAGCAACCTCAGAAGGACAGGACTCTAAAGCGTAGA TTGCTTGATGCCCGATTGAAAGATGATAGGGGTAGTCGACGAGACATGGATAAGAGTGATAGAATAAATGGAGATAGGCC TGACAATTCTCCATCCCGGGAAAGGCAACGGGGAAACCATGATGAAGGCGAAGCAATGTATGATTCATATGGAGGGCCTG CTGTACCTCCATTTACCTCAGATATGCCCCCTCCTCCACCAGTTTTGATGCCTGTACCTGGTGCTGGGCCTTTGGGACCC TTTGTTCCTGCTCCACCAGAGGTTGCAATGCAGATGTTTAGGGATCAAGGAGGTCCATCTTCATATGATCCATCCGGAAT GAACATGCGATCCGGTCCTCACATGGGTGGACCTGCACCAATAATGGCTGTTCCTCCAGGATTTAGACCTGATCCGCGAC GAATGCGAAGTTATCAAGATTTGGATGCCCCAGAAGACGAAGTCACTGTGATAGACTATCGGAGCTTGTAG
Protein sequence (LotjaGi3g1v0101300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEVINLPPESLDRSPSASAPPPPPAAPPAPIPPTSSSAADDDLPPPPPPRRRDRRDDRDFDRPRGGRDYYDRDRDFKRR RSPSPGYRDRRHSPPRRSPPPYKRSRRGSPRGYGPDDRFGHNYSGGYERGVGGRTGYANERSYGRFGHRSAGGFQNGNSV HFADVDMNRGYSDLPSGGAQREGLMSYKQFIQELEDDVLPAEAERRYQEYKSEYISTQKRAYFNAHKDEEWLKDKYHPTN LLTVIERRNENARRVAKDFLLDLQSGTLDLNSGLNSSPPNKSGQASEGNSEEETDASGKRRRHGRGSNNDNDFSAAPKAH PISSEARRIQADIQQAQAVVRKLDIEKGIEDNILYTSDQSKNDDKAHSGSVGPIVIIRGLASVKGLEGVELLDTLITYLW RIHGIDYYGMVETNEAKGFRHVRPDGTGHEEASKSGPEWEKKLDSFWQGRLNGQDPLDVMTAKEKIDAAATDFLDPHVRK IRDEKYGWKYGCGAKGCTKLFHASEFVHKHLKLKHPELLMELTAKLREDLYFQNYMNDSNAPGGTPIMQQPQKDRTLKRR LLDARLKDDRGSRRDMDKSDRINGDRPDNSPSRERQRGNHDEGEAMYDSYGGPAVPPFTSDMPPPPPVLMPVPGAGPLGP FVPAPPEVAMQMFRDQGGPSSYDPSGMNMRSGPHMGGPAPIMAVPPGFRPDPRRMRSYQDLDAPEDEVTVIDYRSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 716 | 716 | 0.0 | ||
| MobiDBLite | 1 | 134 | 134 | - | – | |
| PANTHER | 1 | 716 | 716 | 0.0 | – | |
| MobiDBLite | 15 | 45 | 31 | - | – | |
| MobiDBLite | 46 | 96 | 51 | - | – | |
| Pfam | 188 | 272 | 85 | 4.4E-22 | ||
| MobiDBLite | 269 | 327 | 59 | - | – | |
| MobiDBLite | 269 | 291 | 23 | - | – | |
| MobiDBLite | 292 | 308 | 17 | - | – | |
| Coils | 326 | 346 | 21 | - | – | |
| Pfam | 435 | 612 | 178 | 7.1E-31 | ||
| ProSitePatterns | 492 | 515 | 24 | - | ||
| MobiDBLite | 537 | 614 | 78 | - | – | |
| MobiDBLite | 537 | 552 | 16 | - | – | |
| MobiDBLite | 553 | 604 | 52 | - | – | |
| MobiDBLite | 656 | 703 | 48 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Biological process | MRNA processing | Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide. |
Expression pattern of LotjaGi3g1v0101300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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