Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR007572
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 11 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.591s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0008779.2
n.a. PREDICTED: ycf20-like protein-like isoform X1 [Cicer arietinum] gi|502146602|ref|XP_004506525.1| chr0 3563765 3566679 +
2 domain predictions
 –
Lj3g3v2741930.1
n.a. PREDICTED: ycf20-like protein-like isoform X1 [Cicer arietinum] gi|502146602|ref|XP_004506525.1| chr3 33906581 33909589 -
2 domain predictions
 –
Lj4g3v0385820.1
n.a. PREDICTED: ycf20-like protein-like [Cicer arietinum] gi|502142203|ref|XP_004504842.1| chr4 4972361 4976039 -
2 domain predictions
 –
Lj6g3v0647440.1
n.a. Uncharacterized protein TCM_015077 [Theobroma cacao] gi|508775818|gb|EOY23074.1| chr6 6353541 6358190 +
2 domain predictions
 –
LotjaGi3g1v0436300.1
n.a. Ycf20-like protein; TAIR: AT3G56830.1 YCF20-like protein (DUF565); Swiss-Prot: sp|O80813|YC20L_ARATH Ycf20-like protein; TrEMBL-Plants: tr|I1J7U6|I1J7U6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0436300 LjG1.1_chr3 84768397 84771477 -
3 domain predictions
 –
LotjaGi3g1v0436300.2
n.a. Ycf20-like protein; TAIR: AT3G56830.1 YCF20-like protein (DUF565); Swiss-Prot: sp|O80813|YC20L_ARATH Ycf20-like protein; TrEMBL-Plants: tr|A0A151UC54|A0A151UC54_CAJCA Ycf20-like protein; Found in the gene: LotjaGi3g1v0436300 LjG1.1_chr3 84769449 84769847 -
3 domain predictions
 –
LotjaGi4g1v0039300.1
n.a. Ycf20-like protein; TAIR: AT1G65420.1 antigen receptor-like protein (DUF565); Swiss-Prot: sp|O80813|YC20L_ARATH Ycf20-like protein; TrEMBL-Plants: tr|I1KL49|I1KL49_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0039300 LjG1.1_chr4 4696615 4700595 -
3 domain predictions
 –
LotjaGi6g1v0135600.1
n.a. Ycf20-like protein; TAIR: AT5G43050.1 YCF20-like protein (DUF565); Swiss-Prot: sp|Q1XDS2|YCF20_PYRYE Uncharacterized protein ycf20; TrEMBL-Plants: tr|V7BQ42|V7BQ42_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0135600 LjG1.1_chr6 39127183 39132679 +
3 domain predictions
 –
LotjaGi6g1v0135600.2
n.a. Ycf20-like protein; TAIR: AT5G43050.1 YCF20-like protein (DUF565); Swiss-Prot: sp|Q1XDS2|YCF20_PYRYE Uncharacterized protein ycf20; TrEMBL-Plants: tr|V7BQ42|V7BQ42_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0135600 LjG1.1_chr6 39127330 39132568 +
3 domain predictions
 –
LotjaGi6g1v0135600.3
n.a. Ycf20-like protein; TAIR: AT5G43050.1 YCF20-like protein (DUF565); Swiss-Prot: sp|Q1XDS2|YCF20_PYRYE Uncharacterized protein ycf20; TrEMBL-Plants: tr|V7BQ42|V7BQ42_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0135600 LjG1.1_chr6 39127408 39131944 +
3 domain predictions
 –
LotjaGi6g1v0135600.4
n.a. Ycf20-like protein; TAIR: AT5G43050.1 YCF20-like protein (DUF565); Swiss-Prot: sp|Q1XDS2|YCF20_PYRYE Uncharacterized protein ycf20; TrEMBL-Plants: tr|V7BQ42|V7BQ42_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0135600 LjG1.1_chr6 39131235 39131690 +
3 domain predictions
 –