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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR008758
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 19 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.990s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0103499.1
n.a. n.a. chr0 44133561 44140360 -
2 domain predictions
2 GO terms
Lj0g3v0103499.2
n.a. n.a. chr0 44133561 44140360 -
2 domain predictions
2 GO terms
Lj0g3v0204459.1
n.a. PREDICTED: lysosomal Pro-X carboxypeptidase-like [Cicer arietinum] gi|502152690|ref|XP_004509045.1| chr0 101472130 101474983 -
2 domain predictions
2 GO terms
Lj0g3v0204459.2
n.a. PREDICTED: lysosomal Pro-X carboxypeptidase-like [Cicer arietinum] gi|502152690|ref|XP_004509045.1| chr0 101472655 101474983 -
2 domain predictions
2 GO terms
Lj0g3v0204459.3
n.a. PREDICTED: lysosomal Pro-X carboxypeptidase-like [Cicer arietinum] gi|502152690|ref|XP_004509045.1| chr0 101473286 101474983 -
2 domain predictions
2 GO terms
Lj0g3v0266289.1
n.a. PREDICTED: lysosomal Pro-X carboxypeptidase-like [Cicer arietinum] gi|502152690|ref|XP_004509045.1| chr0 137870955 137871389 -
2 domain predictions
2 GO terms
Lj1g3v4723790.1
n.a. PREDICTED: lysosomal Pro-X carboxypeptidase-like [Cicer arietinum] gi|502112041|ref|XP_004494225.1| chr1 56419281 56423930 -
2 domain predictions
2 GO terms
Lj2g3v1717650.1
n.a. Thymus-specific serine protease [Medicago truncatula] gi|357483671|ref|XP_003612122.1| chr2 26447682 26453535 -
2 domain predictions
2 GO terms
Lj4g3v0696570.1
n.a. PREDICTED: lysosomal Pro-X carboxypeptidase-like [Cicer arietinum] gi|502152690|ref|XP_004509045.1| chr4 11615179 11617057 +
2 domain predictions
2 GO terms
Lj4g3v1022140.1
n.a. PREDICTED: probable serine protease EDA2-like [Glycine max] gi|356559327|ref|XP_003547951.1| chr4 14590844 14596653 -
2 domain predictions
2 GO terms
LotjaGi1g1v0734400.1
n.a. Lysosomal pro-X carboxypeptidase-like protein; TAIR: AT2G24280.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q5RBU7|PCP_PONAB Lysosomal Pro-X carboxypeptidase; TrEMBL-Plants: tr|A0A072U369|A0A072U369_MEDTR Lysosomal pro-X carboxypeptidase-like protein; Found in the gene: LotjaGi1g1v0734400 LjG1.1_chr1 130801901 130806938 -
2 domain predictions
2 GO terms
LotjaGi2g1v0383800.1
n.a. Serine carboxypeptidase S28 family protein; TAIR: AT4G36195.1 Serine carboxypeptidase S28 family protein; Swiss-Prot: sp|Q1PF50|EDA2_ARATH Probable serine protease EDA2; TrEMBL-Plants: tr|I3SCC2|I3SCC2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0383800 LjG1.1_chr2 88008158 88014661 -
2 domain predictions
2 GO terms
LotjaGi2g1v0383800.2
n.a. Serine carboxypeptidase S28 family protein; TAIR: AT4G36195.1 Serine carboxypeptidase S28 family protein; Swiss-Prot: sp|Q1PF50|EDA2_ARATH Probable serine protease EDA2; TrEMBL-Plants: tr|G7KGD8|G7KGD8_MEDTR Serine carboxypeptidase S28 family protein; Found in the gene: LotjaGi2g1v0383800 LjG1.1_chr2 88008262 88014649 -
2 domain predictions
2 GO terms
LotjaGi2g1v0383800.3
n.a. Serine carboxypeptidase S28 family protein; TAIR: AT4G36195.1 Serine carboxypeptidase S28 family protein; Swiss-Prot: sp|Q1PF50|EDA2_ARATH Probable serine protease EDA2; TrEMBL-Plants: tr|G7KGD8|G7KGD8_MEDTR Serine carboxypeptidase S28 family protein; Found in the gene: LotjaGi2g1v0383800 LjG1.1_chr2 88008542 88013988 -
2 domain predictions
2 GO terms
LotjaGi3g1v0171000.1
n.a. Lysosomal Pro-X carboxypeptidase; TAIR: AT5G22860.1 Serine carboxypeptidase S28 family protein; Swiss-Prot: sp|Q2TA14|PCP_BOVIN Lysosomal Pro-X carboxypeptidase; TrEMBL-Plants: tr|A0A151SAK8|A0A151SAK8_CAJCA Lysosomal Pro-X carboxypeptidase; Found in the gene: LotjaGi3g1v0171000 LjG1.1_chr3 23573802 23582201 -
2 domain predictions
2 GO terms
LotjaGi4g1v0091300.1
n.a. Lysosomal Pro-X carboxypeptidase; TAIR: AT5G65760.1 Serine carboxypeptidase S28 family protein; Swiss-Prot: sp|Q5RBU7|PCP_PONAB Lysosomal Pro-X carboxypeptidase; TrEMBL-Plants: tr|A0A059XKX8|A0A059XKX8_CICAR Serine protease; Found in the gene: LotjaGi4g1v0091300 LjG1.1_chr4 12143139 12147265 +
2 domain predictions
2 GO terms
LotjaGi4g1v0091400.1
n.a. Lysosomal Pro-X carboxypeptidase; TAIR: AT5G65760.1 Serine carboxypeptidase S28 family protein; Swiss-Prot: sp|Q5RBU7|PCP_PONAB Lysosomal Pro-X carboxypeptidase; TrEMBL-Plants: tr|V7CCC7|V7CCC7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0091400 LjG1.1_chr4 12153427 12158082 +
2 domain predictions
2 GO terms
LotjaGi4g1v0125200.1
n.a. Serine carboxypeptidase S28 family protein; TAIR: AT4G36195.1 Serine carboxypeptidase S28 family protein; Swiss-Prot: sp|Q1PF50|EDA2_ARATH Probable serine protease EDA2; TrEMBL-Plants: tr|C6TKC9|C6TKC9_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0125200 LjG1.1_chr4 18237011 18243593 -
2 domain predictions
2 GO terms
LotjaGi4g1v0125200.2
n.a. Serine carboxypeptidase S28 family protein; TAIR: AT4G36195.1 Serine carboxypeptidase S28 family protein; Swiss-Prot: sp|Q1PF50|EDA2_ARATH Probable serine protease EDA2; TrEMBL-Plants: tr|C6TKC9|C6TKC9_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0125200 LjG1.1_chr4 18237516 18243635 -
2 domain predictions
2 GO terms