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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR008927
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We have found 91 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.750s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0078409.1
n.a. PREDICTED: probable 3-hydroxyisobutyrate dehydrogenase-like 3, mitochondrial-like [Fragaria vesca subsp]. vesca] gi|470127985|ref|XP_004299936.1| chr0 30183582 30184972 +
2 domain predictions
1 GO term
Lj0g3v0083599.1
n.a. PREDICTED: LOW QUALITY PROTEIN: probable UDP-glucose 6-dehydrogenase 1-like [Cicer arietinum] gi|502094128|ref|XP_004490146.1| chr0 33178252 33178568 +
2 domain predictions
1 GO term
Lj0g3v0172259.1
n.a. PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating-like isoform 3 [Glycine max] gi|356573793|ref|XP_003555040.1| chr0 82696756 82699590 +
2 domain predictions
1 GO term
Lj0g3v0181499.1
n.a. PREDICTED: glycerol-3-phosphate dehydrogenase [NAD](P)+] gi|356539468|ref|XP_003538220.1| chr0 88573587 88578554 -
2 domain predictions
1 GO term
Lj0g3v0201049.1
n.a. Ketose-bisphosphate aldolase class-II family protein isoform 3 [Theobroma cacao] gi|508774098|gb|EOY21354.1| chr0 99298731 99303929 +
2 domain predictions
1 GO term
Lj0g3v0246929.1
n.a. UDP-D-glucose dehydrogenase [Medicago truncatula] gi|357487495|ref|XP_003614035.1| chr0 127977587 127979952 +
2 domain predictions
1 GO term
Lj0g3v0274139.2
n.a. PREDICTED: glycerol-3-phosphate dehydrogenase [NAD](P)+] gi|356500797|ref|XP_003519217.1| chr0 142115183 142118593 -
2 domain predictions
1 GO term
Lj0g3v0306839.1
n.a. Ketol-acid reductoisomerase [Medicago truncatula] gi|357474575|ref|XP_003607572.1| chr0 160178959 160183234 +
2 domain predictions
1 GO term
Lj0g3v0332759.1
n.a. PREDICTED: probable 3-hydroxyisobutyrate dehydrogenase-like 3, mitochondrial-like [Fragaria vesca subsp]. vesca] gi|470127985|ref|XP_004299936.1| chr0 174149268 174150126 +
2 domain predictions
1 GO term
Lj0g3v0336589.1
n.a. Ketose-bisphosphate aldolase class-II family protein isoform 1 [Theobroma cacao] gi|508774096|gb|EOY21352.1| chr0 176288428 176308607 -
2 domain predictions
1 GO term
Lj0g3v0336589.3
n.a. Ketose-bisphosphate aldolase class-II family protein isoform 2 [Theobroma cacao] gi|508774097|gb|EOY21353.1| chr0 176294090 176308607 -
2 domain predictions
1 GO term
Lj0g3v0339029.1
n.a. PREDICTED: glycerol-3-phosphate dehydrogenase [NAD]+] gi|356570275|ref|XP_003553315.1| chr0 177601098 177605387 -
2 domain predictions
1 GO term
Lj1g3v3007740.1
n.a. UDP-glucose 6-dehydrogenase 1 [Glycine max] gi|351726550|ref|NP_001238410.1| chr1 34178781 34181566 -
2 domain predictions
1 GO term
Lj1g3v3101570.1
n.a. PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating-like isoform 3 [Glycine max] gi|356526585|ref|XP_003531897.1| chr1 35159015 35165890 +
2 domain predictions
1 GO term
Lj1g3v3101570.2
n.a. PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating-like isoform 3 [Glycine max] gi|356526585|ref|XP_003531897.1| chr1 35162754 35165890 +
2 domain predictions
1 GO term
Lj1g3v4226900.1
n.a. PREDICTED: glycerol-3-phosphate dehydrogenase [NAD](P)+] gi|356572006|ref|XP_003554161.1| chr1 49942928 49951739 +
2 domain predictions
1 GO term
Lj2g3v1079530.1
n.a. n.a. chr2 17546660 17553562 +
2 domain predictions
1 GO term
Lj2g3v1254000.1
n.a. UDP-D-glucose dehydrogenase [Medicago truncatula] gi|357487495|ref|XP_003614035.1| chr2 20043129 20045809 +
2 domain predictions
1 GO term
Lj2g3v1254010.1
n.a. n.a. chr2 20044113 20046011 -
2 domain predictions
1 GO term
Lj3g3v0323280.1
n.a. Hydroxyacid dehydrogenase/reductase; 6-phosphogluconate dehydrogenase, C-terminal-like [Medicago truncatula] gi|124359345|gb|ABD28508.2| chr3 2423297 2427582 +
2 domain predictions
1 GO term
Lj3g3v0429510.1
n.a. peroxisomal 3-hydroxyacyl-CoA dehydrogenase-like protein [Glycine max] gi|351722947|ref|NP_001234958.1| chr3 4374153 4376645 +
2 domain predictions
1 GO term
Lj3g3v2387600.1
n.a. PREDICTED: glyoxylate/succinic semialdehyde reductase 1-like [Cicer arietinum] gi|502157000|ref|XP_004510724.1| chr3 29704272 29709629 -
2 domain predictions
1 GO term
Lj4g3v0679860.1
n.a. PREDICTED: UDP-glucose 6-dehydrogenase-like isoform X1 [Cicer arietinum] gi|502143513|ref|XP_004505368.1| chr4 11266038 11268789 +
2 domain predictions
1 GO term
Lj4g3v1936580.1
n.a. Arogenate dehydrogenase [Medicago truncatula] gi|357478359|ref|XP_003609465.1| chr4 27199750 27202537 +
2 domain predictions
1 GO term
Lj4g3v2310310.1
n.a. PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein MFP2-like [Cicer arietinum] gi|502150946|ref|XP_004508202.1| chr4 32136413 32145373 +
2 domain predictions
1 GO term
Lj4g3v3002490.1
n.a. PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 1, chloroplastic-like [Cicer arietinum] gi|502139109|ref|XP_004503648.1| chr4 39679365 39682096 -
2 domain predictions
1 GO term
Lj4g3v3043930.1
n.a. PREDICTED: probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial-like [Cicer arietinum] gi|502138668|ref|XP_004503489.1| chr4 40663015 40664836 -
2 domain predictions
1 GO term
Lj6g3v0452120.1
n.a. Arogenate dehydrogenase [Medicago truncatula] gi|357461443|ref|XP_003601003.1| chr6 4403981 4406811 +
2 domain predictions
1 GO term
Lj6g3v1465030.1
n.a. PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein MFP2-like [Cicer arietinum] gi|502085090|ref|XP_004487834.1| chr6 17207311 17214752 -
2 domain predictions
1 GO term
Lj6g3v1629990.1
n.a. PREDICTED: probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial-like isoform X1 [Cicer arietinum] gi|502080130|ref|XP_004486468.1| chr6 18491602 18496259 +
2 domain predictions
1 GO term
Lj6g3v1629990.2
n.a. PREDICTED: probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial-like isoform X1 [Cicer arietinum] gi|502080130|ref|XP_004486468.1| chr6 18491602 18496259 +
2 domain predictions
1 GO term
LotjaGi1g1v0132200.1
n.a. Glycerol-3-phosphate dehydrogenase [NAD](P)+]; TAIR: AT2G40690.1 NAD-dependent glycerol-3-phosphate dehydrogenase family protein; Swiss-Prot: sp|Q949Q0|GPDA2_ARATH Glycerol-3-phosphate dehydrogenase [NAD](+)] 2, chloroplastic; TrEMBL-Plants: tr|A0A1J7GVB7|A0A1J7GVB7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0132200 LjG1.1_chr1 21150763 21156374 -
2 domain predictions
1 GO term
LotjaGi1g1v0132200.3
n.a. Glycerol-3-phosphate dehydrogenase [NAD](P)+]; TAIR: AT2G40690.1 NAD-dependent glycerol-3-phosphate dehydrogenase family protein; Swiss-Prot: sp|Q949Q0|GPDA2_ARATH Glycerol-3-phosphate dehydrogenase [NAD](+)] 2, chloroplastic; TrEMBL-Plants: tr|A0A0S3RMI9|A0A0S3RMI9_PHAAN Glycerol-3-phosphate dehydrogenase [NAD](+)]; Found in the gene: LotjaGi1g1v0132200 LjG1.1_chr1 21153044 21156416 -
2 domain predictions
1 GO term
LotjaGi1g1v0132200.4
n.a. Glycerol-3-phosphate dehydrogenase [NAD](P)+]; TAIR: AT2G40690.2 NAD-dependent glycerol-3-phosphate dehydrogenase family protein; Swiss-Prot: sp|Q949Q0|GPDA2_ARATH Glycerol-3-phosphate dehydrogenase [NAD](+)] 2, chloroplastic; TrEMBL-Plants: tr|V7B6W0|V7B6W0_PHAVU Glycerol-3-phosphate dehydrogenase [NAD](+)]; Found in the gene: LotjaGi1g1v0132200 LjG1.1_chr1 21153274 21154520 -
2 domain predictions
1 GO term
LotjaGi1g1v0132200.5
n.a. Glycerol-3-phosphate dehydrogenase [NAD](P)+]; TAIR: AT2G40690.1 NAD-dependent glycerol-3-phosphate dehydrogenase family protein; Swiss-Prot: sp|Q949Q0|GPDA2_ARATH Glycerol-3-phosphate dehydrogenase [NAD](+)] 2, chloroplastic; TrEMBL-Plants: tr|A0A1J7GVB7|A0A1J7GVB7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0132200 LjG1.1_chr1 21153274 21156374 -
2 domain predictions
1 GO term
LotjaGi1g1v0509800.1
n.a. UDP-glucose 6-dehydrogenase; TAIR: AT5G15490.1 UDP-glucose 6-dehydrogenase family protein; Swiss-Prot: sp|Q96558|UGDH1_SOYBN UDP-glucose 6-dehydrogenase 1; TrEMBL-Plants: tr|A0A0L9U1Z7|A0A0L9U1Z7_PHAAN UDP-glucose 6-dehydrogenase; Found in the gene: LotjaGi1g1v0509800 LjG1.1_chr1 102864558 102867830 -
2 domain predictions
1 GO term
LotjaGi1g1v0509800.2
n.a. UDP-glucose 6-dehydrogenase; TAIR: AT5G15490.1 UDP-glucose 6-dehydrogenase family protein; Swiss-Prot: sp|Q96558|UGDH1_SOYBN UDP-glucose 6-dehydrogenase 1; TrEMBL-Plants: tr|A0A0L9U1Z7|A0A0L9U1Z7_PHAAN UDP-glucose 6-dehydrogenase; Found in the gene: LotjaGi1g1v0509800 LjG1.1_chr1 102865216 102866874 -
2 domain predictions
1 GO term
LotjaGi1g1v0509800.3
n.a. UDP-glucose 6-dehydrogenase; TAIR: AT5G15490.1 UDP-glucose 6-dehydrogenase family protein; Swiss-Prot: sp|Q96558|UGDH1_SOYBN UDP-glucose 6-dehydrogenase 1; TrEMBL-Plants: tr|A0A0L9U1Z7|A0A0L9U1Z7_PHAAN UDP-glucose 6-dehydrogenase; Found in the gene: LotjaGi1g1v0509800 LjG1.1_chr1 102865216 102866958 -
2 domain predictions
1 GO term
LotjaGi1g1v0509800.4
n.a. UDP-glucose 6-dehydrogenase; TAIR: AT5G15490.1 UDP-glucose 6-dehydrogenase family protein; Swiss-Prot: sp|Q96558|UGDH1_SOYBN UDP-glucose 6-dehydrogenase 1; TrEMBL-Plants: tr|A0A0R0IRU3|A0A0R0IRU3_SOYBN UDP-glucose 6-dehydrogenase; Found in the gene: LotjaGi1g1v0509800 LjG1.1_chr1 102865216 102866967 -
2 domain predictions
1 GO term
LotjaGi1g1v0522700.1
n.a. 6-phosphogluconate dehydrogenase, decarboxylating; TAIR: AT3G02360.1 6-phosphogluconate dehydrogenase family protein; Swiss-Prot: sp|Q9FWA3|6GPD3_ARATH 6-phosphogluconate dehydrogenase, decarboxylating 3; TrEMBL-Plants: tr|I1KWM7|I1KWM7_SOYBN 6-phosphogluconate dehydrogenase, decarboxylating; Found in the gene: LotjaGi1g1v0522700 LjG1.1_chr1 104717798 104721303 +
2 domain predictions
1 GO term
LotjaGi1g1v0522700.2
n.a. 6-phosphogluconate dehydrogenase, decarboxylating; TAIR: AT3G02360.1 6-phosphogluconate dehydrogenase family protein; Swiss-Prot: sp|Q9FWA3|6GPD3_ARATH 6-phosphogluconate dehydrogenase, decarboxylating 3; TrEMBL-Plants: tr|I1KWM7|I1KWM7_SOYBN 6-phosphogluconate dehydrogenase, decarboxylating; Found in the gene: LotjaGi1g1v0522700 LjG1.1_chr1 104717959 104722829 +
2 domain predictions
1 GO term
LotjaGi1g1v0522700.3
n.a. 6-phosphogluconate dehydrogenase, decarboxylating; TAIR: AT3G02360.1 6-phosphogluconate dehydrogenase family protein; Swiss-Prot: sp|Q9FWA3|6GPD3_ARATH 6-phosphogluconate dehydrogenase, decarboxylating 3; TrEMBL-Plants: tr|I1KWM7|I1KWM7_SOYBN 6-phosphogluconate dehydrogenase, decarboxylating; Found in the gene: LotjaGi1g1v0522700 LjG1.1_chr1 104719316 104720923 +
2 domain predictions
1 GO term
LotjaGi1g1v0615700.1
n.a. Glycerol-3-phosphate dehydrogenase [NAD](+)]; TAIR: AT5G40610.1 NAD-dependent glycerol-3-phosphate dehydrogenase family protein; Swiss-Prot: sp|P52425|GPDA_CUPLA Glycerol-3-phosphate dehydrogenase [NAD](+)]; TrEMBL-Plants: tr|G7L5E8|G7L5E8_MEDTR Glycerol-3-phosphate dehydrogenase [NAD](+)]; Found in the gene: LotjaGi1g1v0615700 LjG1.1_chr1 116241622 116245931 -
2 domain predictions
1 GO term
LotjaGi1g1v0665400.1
n.a. Pyrroline-5-carboxylate reductase; TAIR: AT5G14800.1 pyrroline-5- carboxylate (P5C) reductase; Swiss-Prot: sp|Q04708|P5CR_PEA Pyrroline-5-carboxylate reductase; TrEMBL-Plants: tr|A0A1J7HNA1|A0A1J7HNA1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0665400 LjG1.1_chr1 122741366 122749740 -
2 domain predictions
1 GO term
LotjaGi1g1v0665400.2
n.a. Pyrroline-5-carboxylate reductase; TAIR: AT5G14800.1 pyrroline-5- carboxylate (P5C) reductase; Swiss-Prot: sp|Q04708|P5CR_PEA Pyrroline-5-carboxylate reductase; TrEMBL-Plants: tr|A0A1J7HNA1|A0A1J7HNA1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0665400 LjG1.1_chr1 122745381 122748890 -
2 domain predictions
1 GO term
LotjaGi1g1v0670200.1
n.a. Glycerol-3-phosphate dehydrogenase [NAD](+)]; TAIR: AT2G41540.1 6-phosphogluconate dehydrogenase family protein; Swiss-Prot: sp|Q8S0G4|GPDH1_ORYSJ Probable glycerol-3-phosphate dehydrogenase [NAD](+)] 1, cytosolic; TrEMBL-Plants: tr|V7CXS6|V7CXS6_PHAVU Glycerol-3-phosphate dehydrogenase [NAD](+)]; Found in the gene: LotjaGi1g1v0670200 LjG1.1_chr1 123379164 123384065 +
2 domain predictions
1 GO term
LotjaGi2g1v0078800.1
n.a. Glycerol-3-phosphate dehydrogenase [NAD](+)]; TAIR: AT5G40610.1 NAD-dependent glycerol-3-phosphate dehydrogenase family protein; Swiss-Prot: sp|P52425|GPDA_CUPLA Glycerol-3-phosphate dehydrogenase [NAD](+)]; TrEMBL-Plants: tr|I1N6W6|I1N6W6_SOYBN Glycerol-3-phosphate dehydrogenase [NAD](+)]; Found in the gene: LotjaGi2g1v0078800 LjG1.1_chr2 21161570 21165350 -
2 domain predictions
1 GO term
LotjaGi2g1v0078800.2
n.a. Glycerol-3-phosphate dehydrogenase [NAD](+)]; TAIR: AT5G40610.1 NAD-dependent glycerol-3-phosphate dehydrogenase family protein; Swiss-Prot: sp|P52425|GPDA_CUPLA Glycerol-3-phosphate dehydrogenase [NAD](+)]; TrEMBL-Plants: tr|A0A0L9VMG7|A0A0L9VMG7_PHAAN Glycerol-3-phosphate dehydrogenase [NAD](+)]; Found in the gene: LotjaGi2g1v0078800 LjG1.1_chr2 21161756 21164915 -
2 domain predictions
1 GO term
LotjaGi2g1v0078800.3
n.a. Glycerol-3-phosphate dehydrogenase [NAD](+)]; TAIR: AT5G40610.1 NAD-dependent glycerol-3-phosphate dehydrogenase family protein; Swiss-Prot: sp|P52425|GPDA_CUPLA Glycerol-3-phosphate dehydrogenase [NAD](+)]; TrEMBL-Plants: tr|I1N6W6|I1N6W6_SOYBN Glycerol-3-phosphate dehydrogenase [NAD](+)]; Found in the gene: LotjaGi2g1v0078800 LjG1.1_chr2 21161756 21165350 -
2 domain predictions
1 GO term
LotjaGi2g1v0196100.1
n.a. Fructose-bisphosphate aldolase; TAIR: AT1G18270.1 ketose-bisphosphate aldolase class-II family protein; Swiss-Prot: sp|Q46888|YGBJ_ECOLI Uncharacterized oxidoreductase YgbJ; TrEMBL-Plants: tr|K7L0V1|K7L0V1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0196100 LjG1.1_chr2 63026704 63048594 +
2 domain predictions
1 GO term