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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0132200 |
| Transcript ID | LotjaGi1g1v0132200.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glycerol-3-phosphate dehydrogenase [NAD](P)+]; TAIR: AT2G40690.1 NAD-dependent glycerol-3-phosphate dehydrogenase family protein; Swiss-Prot: sp|Q949Q0|GPDA2_ARATH Glycerol-3-phosphate dehydrogenase [NAD](+)] 2, chloroplastic; TrEMBL-Plants: tr|A0A1J7GVB7|A0A1J7GVB7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0132200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:21153274..21156374) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGGCAATGTTGGAAGCATCATTGGCGACCCCATTCCTCTCTTCAAAGCCTCACACTCACAACACTTCAAAGCTTCA ACCATTCCCCTCAAAACCCACCTTTCTCACCCTTCGCAGTTCCCCCAGTAGCATCCACCCTCCTTCATGTTCTCGAAATG ATGCTACTGTTTCACCTCCCCTCCAAAGCCCCGACCCGGATGCAAAACCCGAAATCGACCCGACCCGGGACCGCCGCAGA GTCGTCAGGGTCGCCTGGGAGAAACTGGTGCGGTGGTCAAGATCATTGCGCTCTAAGTCCAACACTGACGTGCTTGAACG CACCAACAAGGTTGCATTATGTTCCTCAATGTCCTTGCTTTCTTACTTTTATGTCATGTTTGGAAACTTTTTTGAGAACC ATGGTGAAGCCTAAATCGCGGTGGACAAAAGTAATTTTCCTTAGCTTTTGCTCGTGTCCACCGTGATTCTGGCTTGACCG TGGATTTCTAACGAGTTTCCAAACATGAACTTATTTATTTGCTAAATGTATATTCAAGGACCATGAATGTAATTTTTCAT TATGTGGAGATTAATGTGATGATCATGTATCTTTGAGAGAGTGATTTGACTGTTTACTCCAACTATATAAGAAAAACTTA ACAATTAATATTATATGCATGTGCATAATAAATTATGAATTTGTTAAGCAGTTGGGGGTACCATTATTTCCTGGGTTATT GGTTTTTTTTGTGGCAATGCTTAATCTCCATTTTAACCTTTTTTTTGGCTCATTGTTTTGAGTTTGTTTGATTTGTGGTA TTATTTATGTTAGAAATATAATATAAAACCGTTCATATAGCCCTTACCTAATAGCTTAAGCTTTAAGGGTAATTGGTTGT TTGACAATTTATGATTTATTGACCTTAATTTGAAAGAGGTTCTCTTTTTATTCTTTTATATTTGAGTGTTGGTGATGTAA TATGATGTTTAGTCAGTTTGTGTTGTGGCTTGAGTGGCATTGTGAAATTCTTTCTTGTGCAAAAGGTAGTTGTGCTTGGA GGGGGGTCGTTTGGGACCGCAATGGCTGCTCATGTTGCAAATAGAAAGGCTCAGCTAGAAGTCAACATGCTTGTTCGGGA TCCTCAAGTTTGCTTGTCAATCAATGAGAGACACTGCAATAGGTAACCATTCTGTCTATCCTCATGATCTACATACTGGT TAACTTGTGAGTCGTGATAATCTGATTTCTTCAACCATTTCTCTTACGTGACTGTTTTTTTTTTTTCTGTTAGTAATTAC TTCCCAGATCACACTCTGCCAGAAAACGTAGTTGCAACAACAGATGCGAAATCTGCTTTGCGTGATGCAGATTACTGCCT TCATGCAGTGCCTGTTCAGGTCATTAGAATTTGTTTATTTTTTCTTATCCCCTTTAATATTTGGATATTAGTAGCAGCAG AAGTAGTATTTGATGCTTCATTAAGTCTGAGCATTTGCAATCAAATAAAATACATGTGATGAACCTCAGCATTTGACACT CATCGAAGATTTCACTGTCTGAATCTTAGTTTCTGTCTTTGCAGTTCAGCTCAACTTTTCTCGAGAGCATTGCAGATTAT GTTGATCCAGGTTTGCCTTTCATATCTCTCAGTAAAGGCCTCGAGCTGAATACACTAAGGATGATGGCCCAAATTATTCC TCAAGCACTACGAAATCCTCGGCAGCCTTTTGTTGCACTGTCAGGGCCTTCGTTTGCTCTCGAATTGATGAATAAGCTAC CCACAGGTAACATTAACATTGCTAATTACACTTTTGGATTGTTTCTTCAATTATATGCATGATCGCTTGAAAGCCAATCA TTTATGTTGTTTGGTTCCATTTTCAAATAGCGATGGTGGTGGCATCAAAAGACAAAAAATTGGCAAATAGAGTTCAGCAG CTCCTAGCTTCAAGTCATTTAAGAATAAGCACATCAAGGTAGATAACCTTCAGTAGATTCATAAATGAAATTCAATTTTG TTTGCTAATTGTATATGACTTCTTTTTAGCTGTGTTATGCCTTCTATCGTACAAGTGTGTCTTTTCTGCTTGCTTTACTC TTTCACCTGTATTTTATGATGCTCTGGCTTCTTATTTCAAATAACTGTATGTAATGATTTTGGTGCAAGTGTTCAGCTTT GTAATCTCTGATGACTCCAGTGATGTTACAGGAGTTGAAATAGCAGGTGCACTCAAGAATGTGCTGGCAATAGCAGCAGG GATAGTGGTAGGCATGAATCTTGGTAACAACTCTATGGCTGCTCTTGTCTCGCAAGGTTGTTCAGAGATACGATGGCTTG CAACAAAGGTATTTGACTGTAGAATCTTAAATAAATTCGTAGAACTCTTAGCAAACTGTAGAATCTGGCGCCTTTCTTTT CTAAATATTCGTACTGAAGAAGATTAAACTATGGATTTAATGGTTGGATGTCTTGTTTTTGTTGGTACACTCACACATTC TATTTTTATTTTCATTTGACATATAAAGTCTTATTCGCTTTTCCCCCTTCAAATATTTGATGCGTATTTTCCTTAACTTA TCTCTCTTTCTTCCAAATATCTTTTGAAGATGGGTGCAAAGCCAACTACGATAACTGGTCTGTCAGGAACTGGAGACATA ATGCTTACATGCTTTGTGAATCTTTCAAGAAACAGAACAGTTGGTGTGCGTCTCGGATCGGGCGAGAAGCTCGAGAACAT ACTTAATTCCATGAATCAGGTATCTAAATAGTTTCCTAGTGTTCCTAATCATACCTGAAACTCTTGCAATTGGCAGAGTT ACTGAAAAATGTTTATCCTTACTATATGCAGGTAGCAGAAGGTGTCTCCACAGCTGGAGCTGTGATTGCTTTGGCGCAGA AATATAACGTGAAGATGCCAGTGTTGACAGCAGTTGCTCGTATTATTGACAATGAACTTACGCCTAAGAAAGCTGTTTTT GAGTTAATGAGCCTCCCTCAGGTTTTCTATTCTGACCCTCTTCTCATTAGACCTTTATTGGTCTTATATTTTGACGTTAC AAGTTTTACTAATGACGATTTCCCATCATAGGTTGAAGAAGTATGAAACCTCCCATCATAG
CDS sequence (LotjaGi1g1v0132200.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGCTACTGTTTCACCTCCCCTCCAAAGCCCCGACCCGGATGCAAAACCCGAAATCGACCCGACCCGGGACCGCCGC AGAGTCGTCAGGGTCGCCTGGGAGAAACTGGTGCGGTGGTCAAGATCATTGCGCTCTAAGTCCAACACTGACGTGCTTGA ACGCACCAACAAGTTGGGGGTACCATTATTTCCTGGTCAGTTTGTGTTGTGGCTTGAGTGGCATTGTGAAATTCTTTCTT GTGCAAAAGGTAGTTGTGCTTGGAGGGGGGTCGTTTGGGACCGCAATGGCTGCTCATGTTGCAAATAGAAAGGCTCAGCT AGAAGTCAACATGCTTGTTCGGGATCCTCAAGTTTGCTTGTCAATCAATGAGAGACACTGCAATAGTAATTACTTCCCAG ATCACACTCTGCCAGAAAACGTAGTTGCAACAACAGATGCGAAATCTGCTTTGCGTGATGCAGATTACTGCCTTCATGCA GTGCCTGTTCAGTTCAGCTCAACTTTTCTCGAGAGCATTGCAGATTATGTTGATCCAGGTTTGCCTTTCATATCTCTCAG TAAAGGCCTCGAGCTGAATACACTAAGGATGATGGCCCAAATTATTCCTCAAGCACTACGAAATCCTCGGCAGCCTTTTG TTGCACTGTCAGGGCCTTCGTTTGCTCTCGAATTGATGAATAAGCTACCCACAGCGATGGTGGTGGCATCAAAAGACAAA AAATTGGCAAATAGAGTTCAGCAGCTCCTAGCTTCAAGTCATTTAAGAATAAGCACATCAAGTGATGTTACAGGAGTTGA AATAGCAGGTGCACTCAAGAATGTGCTGGCAATAGCAGCAGGGATAGTGGTAGGCATGAATCTTGGTAACAACTCTATGG CTGCTCTTGTCTCGCAAGGTTGTTCAGAGATACGATGGCTTGCAACAAAGATGGGTGCAAAGCCAACTACGATAACTGGT CTGTCAGGAACTGGAGACATAATGCTTACATGCTTTGTGAATCTTTCAAGAAACAGAACAGTTGGTGTGCGTCTCGGATC GGGCGAGAAGCTCGAGAACATACTTAATTCCATGAATCAGGTAGCAGAAGGTGTCTCCACAGCTGGAGCTGTGATTGCTT TGGCGCAGAAATATAACGTGAAGATGCCAGTGTTGACAGCAGTTGCTCGTATTATTGACAATGAACTTACGCCTAAGAAA GCTGTTTTTGAGTTAATGAGCCTCCCTCAGGTTGAAGAAGTATGA
Protein sequence (LotjaGi1g1v0132200.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMLLFHLPSKAPTRMQNPKSTRPGTAAESSGSPGRNWCGGQDHCALSPTLTCLNAPTSWGYHYFLVSLCCGLSGIVKFFL VQKVVVLGGGSFGTAMAAHVANRKAQLEVNMLVRDPQVCLSINERHCNSNYFPDHTLPENVVATTDAKSALRDADYCLHA VPVQFSSTFLESIADYVDPGLPFISLSKGLELNTLRMMAQIIPQALRNPRQPFVALSGPSFALELMNKLPTAMVVASKDK KLANRVQQLLASSHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVSQGCSEIRWLATKMGAKPTTITG LSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLENILNSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIIDNELTPKK AVFELMSLPQVEEV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 59 | 59 | - | – | |
| MobiDBLite | 7 | 34 | 28 | - | – | |
| MobiDBLite | 13 | 34 | 22 | - | – | |
| Phobius | 60 | 80 | 21 | - | – | |
| Gene3D | 75 | 269 | 195 | 4.1E-61 | – | |
| PIRSF | 80 | 414 | 335 | 3.4E-128 | ||
| SUPERFAMILY | 80 | 262 | 183 | 3.83E-43 | ||
| Phobius | 81 | 414 | 334 | - | – | |
| PANTHER | 82 | 413 | 332 | 7.6E-158 | – | |
| PANTHER | 82 | 413 | 332 | 7.6E-158 | – | |
| Hamap | 82 | 404 | 323 | 32.423 | ||
| Pfam | 83 | 242 | 160 | 7.6E-42 | ||
| PRINTS | 86 | 103 | 18 | 1.5E-37 | ||
| PRINTS | 138 | 165 | 28 | 1.5E-37 | ||
| PRINTS | 215 | 235 | 21 | 1.5E-37 | ||
| PRINTS | 255 | 279 | 25 | 1.5E-37 | ||
| SUPERFAMILY | 261 | 413 | 153 | 1.11E-48 | ||
| Pfam | 262 | 402 | 141 | 1.9E-47 | ||
| ProSitePatterns | 270 | 291 | 22 | - | ||
| Gene3D | 271 | 414 | 144 | 4.0E-48 | ||
| PRINTS | 280 | 304 | 25 | 1.5E-37 | ||
| PRINTS | 320 | 337 | 18 | 1.5E-37 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Glycerol-3-phosphate dehydrogenase [NAD+] activity | Catalysis of the reaction: sn-glycerol 3-phosphate + NAD+ = glycerone phosphate + NADH + H+. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Biological process | Glycerol-3-phosphate metabolic process | The chemical reactions and pathways involving glycerol-3-phosphate, a phosphoric monoester of glycerol. | ||
| Cellular component | Glycerol-3-phosphate dehydrogenase complex | An enzyme complex that catalyzes the dehydrogenation of sn-glycerol 3-phosphate to form glycerone phosphate. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP. | ||
| Biological process | Glycerol-3-phosphate catabolic process | The chemical reactions and pathways resulting in the breakdown of glycerol-3-phosphate, a phosphoric monoester of glycerol. | ||
| Molecular function | NAD binding | Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0132200.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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