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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR009880
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 13 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.306s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0007409.1
n.a. PREDICTED: galactose oxidase-like [Cicer arietinum] gi|502126221|ref|XP_004499224.1| chr0 2886141 2888723 +
2 domain predictions
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Lj0g3v0112629.1
n.a. PREDICTED: galactose oxidase-like [Glycine max] gi|356494873|ref|XP_003516307.1| chr0 49086701 49088720 +
2 domain predictions
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Lj0g3v0170319.1
n.a. PREDICTED: galactose oxidase-like [Cicer arietinum] gi|502126221|ref|XP_004499224.1| chr0 81532475 81535057 +
2 domain predictions
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Lj0g3v0358109.1
n.a. PREDICTED: galactose oxidase-like [Glycine max] gi|356509640|ref|XP_003523554.1| chr0 188444569 188446221 +
2 domain predictions
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Lj1g3v4955530.1
n.a. PREDICTED: galactose oxidase-like [Glycine max] gi|356571163|ref|XP_003553749.1| chr1 60394834 60397298 -
2 domain predictions
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Lj2g3v1339010.1
n.a. PREDICTED: galactose oxidase-like [Solanum lycopersicum] gi|460387424|ref|XP_004239377.1| chr2 21098766 21101268 -
2 domain predictions
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Lj4g3v3060350.1
n.a. Galactose oxidase [Medicago truncatula] gi|357520921|ref|XP_003630749.1| chr4 40785456 40790069 -
2 domain predictions
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Lj5g3v2182420.1
n.a. PREDICTED: galactose oxidase-like [Glycine max] gi|356509640|ref|XP_003523554.1| chr5 31571949 31573601 +
2 domain predictions
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LotjaGi1g1v0227700.1
n.a. Glyoxal oxidase-related protein; TAIR: AT1G14430.1 glyoxal oxidase-related protein; Swiss-Prot: sp|Q3HRQ2|GLOX_VITPS Aldehyde oxidase GLOX; TrEMBL-Plants: tr|A0A151TRE7|A0A151TRE7_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0227700 LjG1.1_chr1 52757808 52762552 +
2 domain predictions
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LotjaGi1g1v0778000.1
n.a. Galactose oxidase; TAIR: AT3G57620.1 glyoxal oxidase-related protein; Swiss-Prot: sp|Q3HRQ2|GLOX_VITPS Aldehyde oxidase GLOX; TrEMBL-Plants: tr|I1NC59|I1NC59_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0778000 LjG1.1_chr1 135009363 135012210 -
2 domain predictions
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LotjaGi2g1v0220800.1
n.a. Galactose oxidase; TAIR: AT5G19580.1 glyoxal oxidase-related protein; Swiss-Prot: sp|Q9FYG4|GLOX1_ARATH Aldehyde oxidase GLOX1; TrEMBL-Plants: tr|I1J7Z9|I1J7Z9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0220800 LjG1.1_chr2 67625257 67628559 +
2 domain predictions
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LotjaGi3g1v0222900.1
n.a. Glyoxal oxidase-related family protein; TAIR: AT3G53950.1 glyoxal oxidase-related protein; Swiss-Prot: sp|Q3HRQ2|GLOX_VITPS Aldehyde oxidase GLOX; TrEMBL-Plants: tr|I1J712|I1J712_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0222900 LjG1.1_chr3 34021317 34023458 -
2 domain predictions
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LotjaGi5g1v0009200.1
n.a. Glyoxal oxidase-related protein; TAIR: AT1G75620.1 glyoxal oxidase-related protein; Swiss-Prot: sp|Q9FYG4|GLOX1_ARATH Aldehyde oxidase GLOX1; TrEMBL-Plants: tr|G7I5Z0|G7I5Z0_MEDTR Glyoxal oxidase amino-terminal protein; Found in the gene: LotjaGi5g1v0009200 LjG1.1_chr5 1967044 1970426 -
2 domain predictions
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