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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0009200 |
| Transcript ID | LotjaGi5g1v0009200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glyoxal oxidase-related protein; TAIR: AT1G75620.1 glyoxal oxidase-related protein; Swiss-Prot: sp|Q9FYG4|GLOX1_ARATH Aldehyde oxidase GLOX1; TrEMBL-Plants: tr|G7I5Z0|G7I5Z0_MEDTR Glyoxal oxidase amino-terminal protein; Found in the gene: LotjaGi5g1v0009200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:1967044..1970426) extracted from Lotus japonicus Gifu genome v1.2.
CTCCCACAGAGTTGAAATGAATTCAACTGCTGGCCATATAAATTGAATGTAGATGTTATCTTATCCCTGTCCTATGCGTT CATCATCATCATCACTACTCTTGTTTGAAAGTGTGCAAGAAAGTCCTCATTTAAGACCCAAACTTATTACCCACATCGTT ACTCTCACAAATCTCACGTATACGTAACAGATGGAGAAGAACCACTAAATCAACACAATCAATCACATTCGGATGAACTC AACTCAATTTATTGATTCTCCATCACCACCCTGTCACACCACTATATAAACCCAGTTATAAACCCCTAACACAGCACTCA CAACACACAACAATTCACCATAACAACATAAACAATTCCATAGCAGAATCAAAGTTTCAATGACTACTTCTCTTCAGGTT TGGGTTATGTTTTTCCTTCTCCCCATTCTAACAGCGCCAACATTGTTGGTTGATGCTGCAGGTAAAGGGGAGTGGAAAGT TCTGCAGAAAAGCATAGGAATAGTAGCAATGCACATGCAGCTTCTCCACAACGACCGTGTCGTGATCTTTGACCGAACAG ACTTCGGCCTCTCCAACCTCACCTTACCAGGCGGTCGGTGCCGCCGCAACGCGCAAGAATTGGTGGTGAAAACCGACTGC ACCGCGCACTCAGTGGAATACGACGTGGCTGCCAATAAGTTCCGCGCACTATACGTCGAGACCGACGTGTGGTGCTCCTC CGGTTCGGTCACCCCTGAGGGGACCCTAGTCCAGACCGGCGGGTTCAACGACGGGGACCGGACGGTTCGGACGTACAGTC CGTGTGCTGATGCTGATTGTGACTGGAAGGAGACTGCCGGCGGGCTGGCTGAGAGGAGGTGGTATGCCAGCAACCACCAG CTGCCGGACGGGCGGCAGATAGTGGTCGGCGGGAGGAGGGCGTTTAGCTACGAGTTTAACCCGAAAGGCGATACCGGTGC GTTCAAGTTGCCGTTTCTTGGTCAGACCAATGATCCTGGGCAGGAGAATAACTTGTACCCGTTTGTTTTCCTGAATGTGG ATGGGAATCTCTTCATCTTTGCCAACAACAGAGCTATCTTGCTTGACTATAAGAAGGTACTGGATACACTACTGTTCTGT TTTGTTTTTGCTTTTGTTTTGTTTCACTTTAATTTTCCTTTGAGCTTATGATAATGGGGACAATTCAAGCGGGGTGTATT CACAGTTTTTGAAGTGAAAAAAAAAGGTATTATGTGTGGTTGATGATAGATATGGGTTAGAAAAATGATAAGGAAAAAAA AATCAAACTCGTTCCATATCCACTTGTGGAAAGATAGAAATAAAAGAGAGAGGAGTTGGAGTCTTGGACAGATATGATGA GTGATAGTATGAAATAAGATGAAATATAAAATAAGATTAAAAAGGAAGAAAGAATAAAGTAGAAATGAGATGAAATATAA AATTCAATAAAGAATATACAAATATAAAGTAGTGGAGTGGGAAAAGATTAGAAAAACAAGAATATGGAGCTATTACATTT AATTGCAAGTCTGAATTCACATTGTTGTCTTTTATATTTAAAGAGACTGGATATACATTTGAAATATAAATTAAAAAAAA GAGTATTTAGGAAATACAATTGAAAATAAAAATTCCTCAGCCCTATGCCCCTATCCTTCTTTTCTAAACTACCGCTATCC TACTTTACTTTTGTTGTATTTAGGATAGTATTTAAACACATAAAGTAACATAGAGTGAGTTATCTTTGGTTTCACTTATT CTCTTAGGCCTAAGTGAAGTAAATATTTTGGTCTTAGCTTATATCCAAAATTCTACTATTCTATATATGTTTAGGTAGCT ATAAATATAATAGCTAACACATAACATCATCTTTATAAGAGTATTTACCAAATGTTTTGCATTTTACATTTTATTTTACT CTAGCTAGTACTTTAAATATATACCAAAAACATTTAACAAAACTCACCAATATCTTGTGCTCCTAATGTCTCTTGTTCTA ACATATCCATTACACCATTTTTATCTCACATTCTATTTATAAACTCATAATCTTTTTCTCATATTATAATTTATATTCAA CCTCAGAATGCAGTGGTGAAAACTTACCCAACAATACCCGGTGGAGACCCAAGGAGTTACCCAAGCAGTGGTTCAGCAGT ATTGTTACCACTGAAGAATCAAGAAGCAGAGGTTTTAATTTGTGGCGGTGCTCCAAAAGGCTCATATCTACGCGCCATAA AGAGCCAATTTGTCAACGCGTTGAACACCTGTGCCCGGATCCAAATAACCGACCCGAATCCAACATGGGCCATGGAAACC ATGCCCGGAGCCAGAGTCATGGGCGACATGGTCATCCTCCCAAACGGTAACGTTTTGATCATCAACGGCGCAACTTCCGG CACCGCCGGGTGGGAATCCGGGCGCGACCCGGCTTTTAGTCCGGTTCTCTACAAACCCGATAGCCCAGCCGGGTCGAGAT TCGAGGTTCAGAACCCGTCCAAAACGCCGCGAATGTACCACTCCACCGCCATTTTGCTCCGCGACGGAAGAGTCCTCGTC GCCGGTAGCAACCCCCATATCGGTTACAGCTTCGGGAACGTGGTTTTCCCGACGGAATTGAGCATGGAAGCGTTTTCTCC TTCGTATTTGGAAGCGGGTAACGCGAATCTGCGTCCGAGAGTGACTGCCCCTGCTTCTCAGAGCAAGGTCAAGTACGGTC AGAAGGTGAAGGTGCGGTTTCAGGTGAAGGCGGCGTTGGATGCTGTGTCGGTGACGATGTTGGCGCCGCCGTTTACCACG CACTCTTTCTCCATGAATCAGAGGATGTTGGTGCTGGGGACAGGGAAGGTGGGAAATGTTGGAGCAGGAACGTATGAAGT TGAGGTCACCATGCCTGGTTCCTCTGTTCTTGCACCAGCTGGTTTTTATCTACTGTTTGTGGTGCACAAAGAGATTCCCA GCGAGGGTGTTTGGATCCAGATACAGTGATTAATTATCCTCTGTTTATGTCTGGTAAACTGAACAACAAGATCACCATAA AATATATGGTTTAAGTTGTTGATTATATTTAATTATTGTTTACCACTGGAGTGTGTGTGTATCAAGTGGTACAGGAGAAA TAAAAAGGGAAATGTGAAGTATGTATGAACATTTCTGAGTGAAAGAAATCAAGAATCACTTATTACTATTGTTTAATTTG ATTGGTAAAGTGAACAAAGCCAATTGACTATTGTTGGCATTTTTTGTAGGAGAGATGGTGGATTGTAATTATTATTGTTG GTGTTTGAAGTACTTCCAGTCTTCCTCAGCTCTCTATTGTACTATTTTCCATATGTTTTAGATTCTTTGTTTGTCATCAT GGTGCAGTTGTCAAGTAAATTGG
CDS sequence (LotjaGi5g1v0009200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTACTTCTCTTCAGGTTTGGGTTATGTTTTTCCTTCTCCCCATTCTAACAGCGCCAACATTGTTGGTTGATGCTGC AGGTAAAGGGGAGTGGAAAGTTCTGCAGAAAAGCATAGGAATAGTAGCAATGCACATGCAGCTTCTCCACAACGACCGTG TCGTGATCTTTGACCGAACAGACTTCGGCCTCTCCAACCTCACCTTACCAGGCGGTCGGTGCCGCCGCAACGCGCAAGAA TTGGTGGTGAAAACCGACTGCACCGCGCACTCAGTGGAATACGACGTGGCTGCCAATAAGTTCCGCGCACTATACGTCGA GACCGACGTGTGGTGCTCCTCCGGTTCGGTCACCCCTGAGGGGACCCTAGTCCAGACCGGCGGGTTCAACGACGGGGACC GGACGGTTCGGACGTACAGTCCGTGTGCTGATGCTGATTGTGACTGGAAGGAGACTGCCGGCGGGCTGGCTGAGAGGAGG TGGTATGCCAGCAACCACCAGCTGCCGGACGGGCGGCAGATAGTGGTCGGCGGGAGGAGGGCGTTTAGCTACGAGTTTAA CCCGAAAGGCGATACCGGTGCGTTCAAGTTGCCGTTTCTTGGTCAGACCAATGATCCTGGGCAGGAGAATAACTTGTACC CGTTTGTTTTCCTGAATGTGGATGGGAATCTCTTCATCTTTGCCAACAACAGAGCTATCTTGCTTGACTATAAGAAGAAT GCAGTGGTGAAAACTTACCCAACAATACCCGGTGGAGACCCAAGGAGTTACCCAAGCAGTGGTTCAGCAGTATTGTTACC ACTGAAGAATCAAGAAGCAGAGGTTTTAATTTGTGGCGGTGCTCCAAAAGGCTCATATCTACGCGCCATAAAGAGCCAAT TTGTCAACGCGTTGAACACCTGTGCCCGGATCCAAATAACCGACCCGAATCCAACATGGGCCATGGAAACCATGCCCGGA GCCAGAGTCATGGGCGACATGGTCATCCTCCCAAACGGTAACGTTTTGATCATCAACGGCGCAACTTCCGGCACCGCCGG GTGGGAATCCGGGCGCGACCCGGCTTTTAGTCCGGTTCTCTACAAACCCGATAGCCCAGCCGGGTCGAGATTCGAGGTTC AGAACCCGTCCAAAACGCCGCGAATGTACCACTCCACCGCCATTTTGCTCCGCGACGGAAGAGTCCTCGTCGCCGGTAGC AACCCCCATATCGGTTACAGCTTCGGGAACGTGGTTTTCCCGACGGAATTGAGCATGGAAGCGTTTTCTCCTTCGTATTT GGAAGCGGGTAACGCGAATCTGCGTCCGAGAGTGACTGCCCCTGCTTCTCAGAGCAAGGTCAAGTACGGTCAGAAGGTGA AGGTGCGGTTTCAGGTGAAGGCGGCGTTGGATGCTGTGTCGGTGACGATGTTGGCGCCGCCGTTTACCACGCACTCTTTC TCCATGAATCAGAGGATGTTGGTGCTGGGGACAGGGAAGGTGGGAAATGTTGGAGCAGGAACGTATGAAGTTGAGGTCAC CATGCCTGGTTCCTCTGTTCTTGCACCAGCTGGTTTTTATCTACTGTTTGTGGTGCACAAAGAGATTCCCAGCGAGGGTG TTTGGATCCAGATACAGTGA
Protein sequence (LotjaGi5g1v0009200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTTSLQVWVMFFLLPILTAPTLLVDAAGKGEWKVLQKSIGIVAMHMQLLHNDRVVIFDRTDFGLSNLTLPGGRCRRNAQE LVVKTDCTAHSVEYDVAANKFRALYVETDVWCSSGSVTPEGTLVQTGGFNDGDRTVRTYSPCADADCDWKETAGGLAERR WYASNHQLPDGRQIVVGGRRAFSYEFNPKGDTGAFKLPFLGQTNDPGQENNLYPFVFLNVDGNLFIFANNRAILLDYKKN AVVKTYPTIPGGDPRSYPSSGSAVLLPLKNQEAEVLICGGAPKGSYLRAIKSQFVNALNTCARIQITDPNPTWAMETMPG ARVMGDMVILPNGNVLIINGATSGTAGWESGRDPAFSPVLYKPDSPAGSRFEVQNPSKTPRMYHSTAILLRDGRVLVAGS NPHIGYSFGNVVFPTELSMEAFSPSYLEAGNANLRPRVTAPASQSKVKYGQKVKVRFQVKAALDAVSVTMLAPPFTTHSF SMNQRMLVLGTGKVGNVGAGTYEVEVTMPGSSVLAPAGFYLLFVVHKEIPSEGVWIQIQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| Phobius | 7 | 18 | 12 | - | – | |
| TMHMM | 7 | 24 | 18 | - | – | |
| Phobius | 19 | 26 | 8 | - | – | |
| PANTHER | 21 | 539 | 519 | 4.1E-279 | – | |
| PANTHER | 21 | 539 | 519 | 4.1E-279 | – | |
| Gene3D | 26 | 434 | 409 | 4.2E-66 | ||
| Phobius | 27 | 539 | 513 | - | – | |
| Pfam | 44 | 280 | 237 | 9.5E-110 | ||
| SUPERFAMILY | 93 | 428 | 336 | 4.84E-35 | ||
| CDD | 430 | 538 | 109 | 2.867E-30 | ||
| SUPERFAMILY | 433 | 538 | 106 | 7.56E-22 | ||
| Gene3D | 435 | 539 | 105 | 2.6E-15 | ||
| Pfam | 435 | 538 | 104 | 1.5E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0009200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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