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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011076
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 3 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.613s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v1388820.1
n.a. PREDICTED: malate synthase, glyoxysomal [Glycine max] gi|356563180|ref|XP_003549842.1| chr4 21440233 21444189 -
2 domain predictions
1 GO term
LotjaGi4g1v0223500.1
n.a. Malate synthase; TAIR: AT5G03860.1 malate synthase; Swiss-Prot: sp|P45458|MASY_SOYBN Malate synthase, glyoxysomal; TrEMBL-Plants: tr|I1MUM7|I1MUM7_SOYBN Malate synthase; Found in the gene: LotjaGi4g1v0223500 LjG1.1_chr4 52872395 52876552 -
2 domain predictions
1 GO term
LotjaGi4g1v0223500.2
n.a. Malate synthase; TAIR: AT5G03860.1 malate synthase; Swiss-Prot: sp|P45458|MASY_SOYBN Malate synthase, glyoxysomal; TrEMBL-Plants: tr|I1MUM7|I1MUM7_SOYBN Malate synthase; Found in the gene: LotjaGi4g1v0223500 LjG1.1_chr4 52872793 52876563 -
2 domain predictions
1 GO term