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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011230
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 11 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.397s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0109269.1
n.a. PREDICTED: probable inactive purple acid phosphatase 29-like [Glycine max] gi|356573279|ref|XP_003554790.1| chr0 47291067 47294879 +
2 domain predictions
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Lj3g3v0821240.1
n.a. PREDICTED: probable inactive purple acid phosphatase 16-like [Cicer arietinum] gi|502179076|ref|XP_004516368.1| chr3 9981741 9986211 -
2 domain predictions
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LotjaGi3g1v0116000.1
n.a. Inactive purple acid phosphatase; TAIR: AT3G10150.2 purple acid phosphatase 16; Swiss-Prot: sp|Q9SR79|PPA16_ARATH Probable inactive purple acid phosphatase 16; TrEMBL-Plants: tr|A0A072VTR9|A0A072VTR9_MEDTR Inactive purple acid phosphatase; Found in the gene: LotjaGi3g1v0116000 LjG1.1_chr3 14215099 14219933 +
2 domain predictions
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LotjaGi3g1v0116000.2
n.a. Inactive purple acid phosphatase; TAIR: AT3G10150.2 purple acid phosphatase 16; Swiss-Prot: sp|Q9SR79|PPA16_ARATH Probable inactive purple acid phosphatase 16; TrEMBL-Plants: tr|I1JGE7|I1JGE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0116000 LjG1.1_chr3 14216089 14218710 +
2 domain predictions
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LotjaGi3g1v0299400.1
n.a. Purple acid phosphatase; TAIR: AT5G63140.1 purple acid phosphatase 29; Swiss-Prot: sp|Q9FMK9|PPA29_ARATH Probable inactive purple acid phosphatase 29; TrEMBL-Plants: tr|K7N0G3|K7N0G3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0299400 LjG1.1_chr3 62454607 62459345 +
2 domain predictions
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LotjaGi3g1v0299400.2
n.a. Purple acid phosphatase; TAIR: AT5G63140.1 purple acid phosphatase 29; Swiss-Prot: sp|Q9FMK9|PPA29_ARATH Probable inactive purple acid phosphatase 29; TrEMBL-Plants: tr|A0A151TYG9|A0A151TYG9_CAJCA Putative inactive purple acid phosphatase 29; Found in the gene: LotjaGi3g1v0299400 LjG1.1_chr3 62454890 62457867 +
2 domain predictions
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LotjaGi3g1v0405700.1
n.a. Inactive purple acid phosphatase-like protein; TAIR: AT5G63140.1 purple acid phosphatase 29; Swiss-Prot: sp|Q9FMK9|PPA29_ARATH Probable inactive purple acid phosphatase 29; TrEMBL-Plants: tr|Q9M3Z3|Q9M3Z3_CICAR Putative PTS protein; Found in the gene: LotjaGi3g1v0405700 LjG1.1_chr3 80909722 80916276 -
2 domain predictions
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LotjaGi3g1v0405700.2
n.a. Inactive purple acid phosphatase-like protein; TAIR: AT5G63140.1 purple acid phosphatase 29; Swiss-Prot: sp|Q9FMK9|PPA29_ARATH Probable inactive purple acid phosphatase 29; TrEMBL-Plants: tr|Q9M3Z3|Q9M3Z3_CICAR Putative PTS protein; Found in the gene: LotjaGi3g1v0405700 LjG1.1_chr3 80909791 80916203 -
2 domain predictions
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LotjaGi3g1v0405700.3
n.a. Inactive purple acid phosphatase-like protein; TAIR: AT5G63140.1 purple acid phosphatase 29; Swiss-Prot: sp|Q9FMK9|PPA29_ARATH Probable inactive purple acid phosphatase 29; TrEMBL-Plants: tr|Q9M3Z3|Q9M3Z3_CICAR Putative PTS protein; Found in the gene: LotjaGi3g1v0405700 LjG1.1_chr3 80913495 80915899 -
2 domain predictions
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LotjaGi6g1v0234800.2
n.a. Inactive purple acid phosphatase-like protein; TAIR: AT5G57140.1 purple acid phosphatase 28; Swiss-Prot: sp|Q9LU72|PPA28_ARATH Probable inactive purple acid phosphatase 28; TrEMBL-Plants: tr|K7LC27|K7LC27_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0234800 LjG1.1_chr6 54452367 54455202 -
2 domain predictions
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LotjaGi6g1v0234800.3
n.a. Inactive purple acid phosphatase-like protein; TAIR: AT5G57140.1 purple acid phosphatase 28; Swiss-Prot: sp|Q9LU72|PPA28_ARATH Probable inactive purple acid phosphatase 28; TrEMBL-Plants: tr|K7LC27|K7LC27_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0234800 LjG1.1_chr6 54452667 54455134 -
2 domain predictions
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