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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0299400 |
| Transcript ID | LotjaGi3g1v0299400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Purple acid phosphatase; TAIR: AT5G63140.1 purple acid phosphatase 29; Swiss-Prot: sp|Q9FMK9|PPA29_ARATH Probable inactive purple acid phosphatase 29; TrEMBL-Plants: tr|A0A151TYG9|A0A151TYG9_CAJCA Putative inactive purple acid phosphatase 29; Found in the gene: LotjaGi3g1v0299400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:62454890..62457867) extracted from Lotus japonicus Gifu genome v1.2.
GGGAATGGCACAAAGAGGAAAGTGGTTTTTGATTTCACTCTATTGGTTTTTCTTGATTCAGATTTGCATCTCAGAAGCAC AGAAGCTGAGGTTTGGAAAAAATGGAGAGTTCAAGATTTTGCAGGTTGCAGATATGCACTATGCTGATGGAAAATCCACC CACTGCTTGGATGTCCTCCATTCTCAGTATGCTTCTTGCTCTGACCTCAACACCACTGCTTTCATTCAAAGGATGATTCT TGCTGAGAAACCCAACCTTATTGTCTTCACTGGTATATTATATATACATGCTCTTGTTGCTATTTCCTTTTCTTTTTGTC TCATCATTTCTTTCTAAGTGGGTATGCACTGCAAAAAGTTGCTAATATTGGAAACACTGTCTCATCCTTTACTTAATTAG CTTAATTGCAGGTTGGACTCTTGAAACAGGTTTTGGTTTGATAGAATTGGGGTAATTGAGGTGACTTACATTTAAAGGGT TATAATTCCAAGAAGGGATTAATCAGTTCAAAATTAATAACCAAAATTAACTTCATTTGTTCCTTCCAATTATGTTCTCA AGTGTTACTTTCCCTTATAACAACTTCTACTCAACAAGGATTAAAGACTTCATTCTAATTACTAGTGTTTGGGATAAAAT GAACTTCTAAGTGAGTAACTAGATCAAAACTAAGAGAGTTTTGTATATATTAGCTTGGACTTTGAATTTTTTTCCTTATT AAATTTGTTGCAATTTGTAGTGTTTGATCCATGTTGAAGATATCGAGGATCTGTAGTGTTTGATCCATATTGAAGAATGT TAAGATGGATGAGTGGTCACACTAGGAAAGATAAGATACGCAGTGAGCGGATAAGAGAAGATATTAGGATGACGCCTATC ATCGAGATGCTGATGGAAGATCAGTAAAGGTAGTATGGACATGTACAAAGAAGACCATTGGAGGCACTATTGAGAAGGGT TGATTAGGTGGTGTTTAGACCTATGAAGAGAGGTAGAGCCTAGAGGGAAAGTTAAAAGAACTTGGGAAGACATTGTTAAA TATGATCTCATTGTCAATAATGTCCCTCACAATCTGGTTTTTGATCGAGCACAATGAATGACGTAGTGTGATCCATATAG CCGACCTCACTTAGTGGGATAAGGCTTTTGTTGTTGTTATTAAATTAGTTGCAATTTTCTTTTGAGTCTTGATGTGAGAT ATCCCATTGTGCTTATTCATATTGCCGTGACAGGTGATAACATATATGGATCTGATGCCTCGGATCCTGCTAAATCAATG GATGCGGCTGTTGCACCTGCAATCGCTTCAAACATTCCTTGGGTAGCTATTTTGGGCAACCATGACCAGGAAGGGTCGCT CTCTAGGGAAGGGGTGATGAAACATATTGTTGGGATGAAAAACACTTTATCTAAAGTCAATCCTCCTGAAGTGCACTTAA TTGATGGTTTTGGGAACTATAACTTGGAGGTTGGAGGAGTTGAAGGCACTGGTTTTGAAAATAAATCAGTGCTTAATCTG TACTTTCTCGACAGTGGAGATTACTCCAAGGTTCCGTTCATTCATGGATACGGTTGGATCAAACCCTCTCAGCAACTTTG GTACCAACGAACATTTGAAAAGCTTCGGGTATTGTTTTACCTGTTCCATTGATTGGCTGTATTTTGGCCACAGTTCATTG CATTCTAAGATCCACTAAAGGGTTCATCCTGTTTCTCTTTTTGTTTTGTTTTTTTGTCATTTGTCTATAGCTGCTTATAG ATTTCTGCCTATGTTGTGTCATAGTCAGTCCTAAGCCCGGATAAAGGAAGAATATTGTGTTAGGTCTGTGCCTCTGCAGC AGCTAAAACTGGCAGTGTCTTTAACATGAATCAAGTGATCCATATAGCCGACTTTACTTAGTGGGATAAGACTTTTGTTA CGTGTTTCTCTTAGGCCTAAATATCCCAAAAGTTAGCTCAGAGTTAGAGTTAGGTCTAATCCGAATCTAATATGTATTCG AATTTAGAGCCTATATAGGGTAGACCAATCCTCACCCCTGAGCTAGTTTTAAGGGTAGTTAGGCCTATCCCGGATTCTAA AATGATATCAGAACCTATATAGGGTAGAGCAATCCTCACCCATGAGCTAGTCTTTGAGGTAGAGTTAGGCCTAACCCAAA TCCAATAGTTACGTGATATGTCTACATCTGCTTATAGATGGAAGTTTCTGTGGGTCTTCATTACATATAAGACTGAATTT TCAGTTGTTTCCCTTGATAATATTTGGATTAACCATTCACTCTTTGCTCTACAGAAAGCTTACAAGAATGAACCAGTGCC TCAAAAAGAAGCTGCACCTGGTCTTGCATACTTTCACATCCCATTGCCTGAATATGCTAGTTTTGACTCATCAAACTTTA CAGGTGTGAAACAAGAAAAGATTAGTTCACCTTCTGTCAATTCTGGCTTTTTCACAAGGTTGGTTGAGGCCGGAGATGTG AAGGCTGTTTTCGCTGGCCATGATCATGTCAATGATTTCTGTGGCAAGATGACAGGAATACATCTTTGTTATGCCGGGGG ATTCGGATATCATGCTTATGGAAAAGCTGGATGGTCAAGGAGGGCAAGAGTGGTGGAAATTAGCTTGGAGAAGACGGAAA ATGGCGATTGGGAAGATGTCAAGTCAATTAGAACATGGAAACGCCTTGATGATCAATATCTTACTAAAATTGATGGCCAG GTCTTGTGGAGCAAGAGTTTTGATGGTAAGATATCTGTGAAATACTAGGGCCACTATGTTCCTTGTTCTCAAACTTGTAT TATATATAGACTGAGGGATGATTCTATCTTTAGAATTACACTTCATCATTTCCATATCTGAGTTGATAAAAAGATACAAG GAAGCAAATATTGAAAAATTGTTTACAGAACAAAAACCTATAACTATTTAATGGACATGAACCATTAGTAAACATTTCAT TTATCAAGAACTAACTAG
CDS sequence (LotjaGi3g1v0299400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACAAAGAGGAAAGTGGTTTTTGATTTCACTCTATTGGTTTTTCTTGATTCAGATTTGCATCTCAGAAGCACAGAA GCTGAGGTTTGGAAAAAATGGAGAGTTCAAGATTTTGCAGGTTGCAGATATGCACTATGCTGATGGAAAATCCACCCACT GCTTGGATGTCCTCCATTCTCAGTATGCTTCTTGCTCTGACCTCAACACCACTGCTTTCATTCAAAGGATGATTCTTGCT GAGAAACCCAACCTTATTGTCTTCACTGGTGATAACATATATGGATCTGATGCCTCGGATCCTGCTAAATCAATGGATGC GGCTGTTGCACCTGCAATCGCTTCAAACATTCCTTGGGTAGCTATTTTGGGCAACCATGACCAGGAAGGGTCGCTCTCTA GGGAAGGGGTGATGAAACATATTGTTGGGATGAAAAACACTTTATCTAAAGTCAATCCTCCTGAAGTGCACTTAATTGAT GGTTTTGGGAACTATAACTTGGAGGTTGGAGGAGTTGAAGGCACTGGTTTTGAAAATAAATCAGTGCTTAATCTGTACTT TCTCGACAGTGGAGATTACTCCAAGGTTCCGTTCATTCATGGATACGGTTGGATCAAACCCTCTCAGCAACTTTGGTACC AACGAACATTTGAAAAGCTTCGGAAAGCTTACAAGAATGAACCAGTGCCTCAAAAAGAAGCTGCACCTGGTCTTGCATAC TTTCACATCCCATTGCCTGAATATGCTAGTTTTGACTCATCAAACTTTACAGGTGTGAAACAAGAAAAGATTAGTTCACC TTCTGTCAATTCTGGCTTTTTCACAAGGTTGGTTGAGGCCGGAGATGTGAAGGCTGTTTTCGCTGGCCATGATCATGTCA ATGATTTCTGTGGCAAGATGACAGGAATACATCTTTGTTATGCCGGGGGATTCGGATATCATGCTTATGGAAAAGCTGGA TGGTCAAGGAGGGCAAGAGTGGTGGAAATTAGCTTGGAGAAGACGGAAAATGGCGATTGGGAAGATGTCAAGTCAATTAG AACATGGAAACGCCTTGATGATCAATATCTTACTAAAATTGATGGCCAGGTCTTGTGGAGCAAGAGTTTTGATGGTAAGA TATCTGTGAAATACTAG
Protein sequence (LotjaGi3g1v0299400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAQRGKWFLISLYWFFLIQICISEAQKLRFGKNGEFKILQVADMHYADGKSTHCLDVLHSQYASCSDLNTTAFIQRMILA EKPNLIVFTGDNIYGSDASDPAKSMDAAVAPAIASNIPWVAILGNHDQEGSLSREGVMKHIVGMKNTLSKVNPPEVHLID GFGNYNLEVGGVEGTGFENKSVLNLYFLDSGDYSKVPFIHGYGWIKPSQQLWYQRTFEKLRKAYKNEPVPQKEAAPGLAY FHIPLPEYASFDSSNFTGVKQEKISSPSVNSGFFTRLVEAGDVKAVFAGHDHVNDFCGKMTGIHLCYAGGFGYHAYGKAG WSRRARVVEISLEKTENGDWEDVKSIRTWKRLDDQYLTKIDGQVLWSKSFDGKISVKY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| SignalP_EUK | 1 | 25 | 25 | - | – | |
| Phobius | 7 | 18 | 12 | - | – | |
| TMHMM | 7 | 26 | 20 | - | – | |
| PIRSF | 7 | 366 | 360 | 7.7E-129 | ||
| Phobius | 19 | 25 | 7 | - | – | |
| PANTHER | 25 | 370 | 346 | 7.9E-180 | – | |
| PANTHER | 25 | 370 | 346 | 7.9E-180 | – | |
| Phobius | 26 | 378 | 353 | - | – | |
| SUPERFAMILY | 32 | 359 | 328 | 1.07E-47 | – | |
| CDD | 34 | 317 | 284 | 2.37123E-71 | – | |
| Pfam | 36 | 293 | 258 | 5.6E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi3g1v0299400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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