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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011330
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 14 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.785s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0272729.1
n.a. Lysosomal alpha-mannosidase [Medicago truncatula] gi|357517983|ref|XP_003629280.1| chr0 141310157 141319923 +
2 domain predictions
2 GO terms
Lj1g3v1442810.1
n.a. PREDICTED: lysosomal alpha-mannosidase-like isoform X1 [Cicer arietinum] gi|502133398|ref|XP_004501750.1| chr1 17365288 17378113 +
2 domain predictions
2 GO terms
Lj1g3v1442810.2
n.a. PREDICTED: lysosomal alpha-mannosidase-like isoform X1 [Cicer arietinum] gi|502133398|ref|XP_004501750.1| chr1 17368813 17378113 +
2 domain predictions
2 GO terms
Lj1g3v3904360.1
n.a. PREDICTED: lysosomal alpha-mannosidase-like isoform 1 [Glycine max] gi|356561171|ref|XP_003548858.1| chr1 45449512 45460325 -
2 domain predictions
2 GO terms
Lj1g3v3904360.2
n.a. PREDICTED: lysosomal alpha-mannosidase-like isoform 1 [Glycine max] gi|356561171|ref|XP_003548858.1| chr1 45449512 45462098 -
2 domain predictions
2 GO terms
Lj1g3v3904370.1
n.a. PREDICTED: lysosomal alpha-mannosidase-like [Cicer arietinum] gi|502106849|ref|XP_004493076.1| chr1 45462810 45475625 -
2 domain predictions
2 GO terms
Lj2g3v1022240.1
n.a. PREDICTED: alpha-mannosidase 2x-like [Glycine max] gi|356550935|ref|XP_003543837.1| chr2 15993975 16000529 -
2 domain predictions
2 GO terms
LotjaGi1g1v0333500.1
n.a. Alpha-mannosidase; TAIR: AT5G13980.1 Glycosyl hydrolase family 38 protein; Swiss-Prot: sp|Q8LPJ3|MANA2_ARATH Probable alpha-mannosidase At5g13980; TrEMBL-Plants: tr|I1JXQ5|I1JXQ5_SOYBN Alpha-mannosidase; Found in the gene: LotjaGi1g1v0333500 LjG1.1_chr1 79176226 79186951 +
2 domain predictions
2 GO terms
LotjaGi1g1v0333500.2
n.a. Alpha-mannosidase; TAIR: AT5G13980.1 Glycosyl hydrolase family 38 protein; Swiss-Prot: sp|Q8LPJ3|MANA2_ARATH Probable alpha-mannosidase At5g13980; TrEMBL-Plants: tr|I1JXQ5|I1JXQ5_SOYBN Alpha-mannosidase; Found in the gene: LotjaGi1g1v0333500 LjG1.1_chr1 79176390 79186047 +
2 domain predictions
2 GO terms
LotjaGi1g1v0632800.1
n.a. Alpha-mannosidase; TAIR: AT5G13980.1 Glycosyl hydrolase family 38 protein; Swiss-Prot: sp|Q8LPJ3|MANA2_ARATH Probable alpha-mannosidase At5g13980; TrEMBL-Plants: tr|I1ML97|I1ML97_SOYBN Alpha-mannosidase; Found in the gene: LotjaGi1g1v0632800 LjG1.1_chr1 118691694 118704603 -
2 domain predictions
2 GO terms
LotjaGi1g1v0632900.1
n.a. Alpha-mannosidase; TAIR: AT3G26720.1 Glycosyl hydrolase family 38 protein; Swiss-Prot: sp|P94078|MANA1_ARATH Alpha-mannosidase At3g26720; TrEMBL-Plants: tr|G7KX96|G7KX96_MEDTR Alpha-mannosidase; Found in the gene: LotjaGi1g1v0632900 LjG1.1_chr1 118705044 118717931 -
2 domain predictions
2 GO terms
LotjaGi2g1v0252400.1
n.a. Alpha-mannosidase; TAIR: AT5G14950.1 golgi alpha-mannosidase II; Swiss-Prot: sp|Q9LFR0|GMAN2_ARATH Alpha-mannosidase 2; TrEMBL-Plants: tr|G7KJH1|G7KJH1_MEDTR Alpha-mannosidase; Found in the gene: LotjaGi2g1v0252400 LjG1.1_chr2 71792269 71798491 -
2 domain predictions
2 GO terms
LotjaGi2g1v0252400.2
n.a. Alpha-mannosidase; TAIR: AT5G14950.1 golgi alpha-mannosidase II; Swiss-Prot: sp|Q9LFR0|GMAN2_ARATH Alpha-mannosidase 2; TrEMBL-Plants: tr|K7LXD4|K7LXD4_SOYBN Alpha-mannosidase; Found in the gene: LotjaGi2g1v0252400 LjG1.1_chr2 71792820 71796926 -
2 domain predictions
2 GO terms
LotjaGi4g1v0129600.1
n.a. Alpha-mannosidase; TAIR: AT5G66150.2 Glycosyl hydrolase family 38 protein; Swiss-Prot: sp|C0HJB3|MANA_CANEN Alpha-mannosidase; TrEMBL-Plants: tr|G7LB83|G7LB83_MEDTR Alpha-mannosidase; Found in the gene: LotjaGi4g1v0129600 LjG1.1_chr4 18964925 18977335 +
2 domain predictions
2 GO terms