Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

IPR011330

Source: InterPro

Description

IPR011330 is a Glycoside hydrolase/deacetylase, beta/alpha-barrel.

<p>This superfamily represents a structural domain found in glycoside hydrolase families 38 ([cazy:GH38], e.g. alpha-mannosidase) [[cite:PUB00030417]] and 57 ([cazy:GH57], e.g. 4-alpha-glucanotransferase, N-terminal) [[cite:PUB00014074]], as well as in NodB-like polysaccharide deacetylase and in some hypothetical proteins (e.g. TT1467, N-terminal domain). This domain consists of a 7-stranded β/α barrel, although in some families the β-barrels may be distorted and may vary in the number of strands.</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0005975
Biological process Carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
Subterm of

Associated Lotus transcripts 14

Transcript Name Description Predicted domains Domain count
Lj0g3v0272729.1
– Lysosomal alpha-mannosidase [Medicago truncatula] gi|357517983|ref|XP_003629280.1|
Domains
29
Lj1g3v1442810.1
– PREDICTED: lysosomal alpha-mannosidase-like isoform X1 [Cicer arietinum] gi|502133398|ref|XP_004501750.1|
Domains
32
Lj1g3v1442810.2
– PREDICTED: lysosomal alpha-mannosidase-like isoform X1 [Cicer arietinum] gi|502133398|ref|XP_004501750.1|
Domains
23
Lj1g3v3904360.1
– PREDICTED: lysosomal alpha-mannosidase-like isoform 1 [Glycine max] gi|356561171|ref|XP_003548858.1|
Domains
23
Lj1g3v3904360.2
– PREDICTED: lysosomal alpha-mannosidase-like isoform 1 [Glycine max] gi|356561171|ref|XP_003548858.1|
Domains
23
Lj1g3v3904370.1
– PREDICTED: lysosomal alpha-mannosidase-like [Cicer arietinum] gi|502106849|ref|XP_004493076.1|
Domains
29
Lj2g3v1022240.1
– PREDICTED: alpha-mannosidase 2x-like [Glycine max] gi|356550935|ref|XP_003543837.1|
Domains
27
LotjaGi1g1v0333500.1
– Alpha-mannosidase; TAIR: AT5G13980.1 Glycosyl hydrolase family 38 protein; Swiss-Prot: sp|Q8LPJ3|MANA2_ARATH Probable alpha-mannosidase At5g13980; TrEMBL-Plants: tr|I1JXQ5|I1JXQ5_SOYBN Alpha-mannosidase; Found in the gene: LotjaGi1g1v0333500
Domains
33
LotjaGi1g1v0333500.2
– Alpha-mannosidase; TAIR: AT5G13980.1 Glycosyl hydrolase family 38 protein; Swiss-Prot: sp|Q8LPJ3|MANA2_ARATH Probable alpha-mannosidase At5g13980; TrEMBL-Plants: tr|I1JXQ5|I1JXQ5_SOYBN Alpha-mannosidase; Found in the gene: LotjaGi1g1v0333500
Domains
26
LotjaGi1g1v0632800.1
– Alpha-mannosidase; TAIR: AT5G13980.1 Glycosyl hydrolase family 38 protein; Swiss-Prot: sp|Q8LPJ3|MANA2_ARATH Probable alpha-mannosidase At5g13980; TrEMBL-Plants: tr|I1ML97|I1ML97_SOYBN Alpha-mannosidase; Found in the gene: LotjaGi1g1v0632800
Domains
33
LotjaGi1g1v0632900.1
– Alpha-mannosidase; TAIR: AT3G26720.1 Glycosyl hydrolase family 38 protein; Swiss-Prot: sp|P94078|MANA1_ARATH Alpha-mannosidase At3g26720; TrEMBL-Plants: tr|G7KX96|G7KX96_MEDTR Alpha-mannosidase; Found in the gene: LotjaGi1g1v0632900
Domains
32
LotjaGi2g1v0252400.1
– Alpha-mannosidase; TAIR: AT5G14950.1 golgi alpha-mannosidase II; Swiss-Prot: sp|Q9LFR0|GMAN2_ARATH Alpha-mannosidase 2; TrEMBL-Plants: tr|G7KJH1|G7KJH1_MEDTR Alpha-mannosidase; Found in the gene: LotjaGi2g1v0252400
Domains
28
LotjaGi2g1v0252400.2
– Alpha-mannosidase; TAIR: AT5G14950.1 golgi alpha-mannosidase II; Swiss-Prot: sp|Q9LFR0|GMAN2_ARATH Alpha-mannosidase 2; TrEMBL-Plants: tr|K7LXD4|K7LXD4_SOYBN Alpha-mannosidase; Found in the gene: LotjaGi2g1v0252400
Domains
22
LotjaGi4g1v0129600.1
– Alpha-mannosidase; TAIR: AT5G66150.2 Glycosyl hydrolase family 38 protein; Swiss-Prot: sp|C0HJB3|MANA_CANEN Alpha-mannosidase; TrEMBL-Plants: tr|G7LB83|G7LB83_MEDTR Alpha-mannosidase; Found in the gene: LotjaGi4g1v0129600
Domains
32

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd10810 CDD 1 7.14