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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR012004
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We have found 17 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.683s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0258989.1
n.a. 6-phosphofructokinase [Medicago truncatula] gi|357517251|ref|XP_003628914.1| chr0 134519816 134530578 -
2 domain predictions
3 GO terms
Lj1g3v2095500.1
n.a. PREDICTED: 6-phosphofructokinase 3-like [Glycine max] gi|356515641|ref|XP_003526507.1| chr1 24768709 24774211 +
3 domain predictions
3 GO terms
Lj2g3v1453880.1
n.a. PREDICTED: 6-phosphofructokinase 5, chloroplastic-like [Cicer arietinum] gi|502092757|ref|XP_004489766.1| chr2 22848375 22853941 +
2 domain predictions
3 GO terms
Lj3g3v0290220.2
n.a. PREDICTED: 6-phosphofructokinase 3-like [Glycine max] gi|356550484|ref|XP_003543617.1| chr3 1903864 1908829 +
2 domain predictions
3 GO terms
Lj4g3v0095120.1
n.a. PREDICTED: 6-phosphofructokinase 2-like [Cicer arietinum] gi|502126527|ref|XP_004499341.1| chr4 780000 782101 +
3 domain predictions
3 GO terms
LotjaGi1g1v0409800.1
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT4G26270.1 phosphofructokinase 3; Swiss-Prot: sp|Q94AA4|PFKA3_ARATH ATP-dependent 6-phosphofructokinase 3; TrEMBL-Plants: tr|A0A151TST4|A0A151TST4_CAJCA ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi1g1v0409800 LjG1.1_chr1 90025072 90031642 +
3 domain predictions
3 GO terms
LotjaGi2g1v0227800.1
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT4G26270.1 phosphofructokinase 3; Swiss-Prot: sp|Q94AA4|PFKA3_ARATH ATP-dependent 6-phosphofructokinase 3; TrEMBL-Plants: tr|V7C472|V7C472_PHAVU ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi2g1v0227800 LjG1.1_chr2 68551565 68558597 +
3 domain predictions
3 GO terms
LotjaGi2g1v0227800.2
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT4G26270.1 phosphofructokinase 3; Swiss-Prot: sp|Q94AA4|PFKA3_ARATH ATP-dependent 6-phosphofructokinase 3; TrEMBL-Plants: tr|V7C472|V7C472_PHAVU ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi2g1v0227800 LjG1.1_chr2 68552724 68558728 +
3 domain predictions
3 GO terms
LotjaGi2g1v0227800.3
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT4G26270.1 phosphofructokinase 3; Swiss-Prot: sp|Q94AA4|PFKA3_ARATH ATP-dependent 6-phosphofructokinase 3; TrEMBL-Plants: tr|V7C472|V7C472_PHAVU ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi2g1v0227800 LjG1.1_chr2 68554425 68558116 +
2 domain predictions
3 GO terms
LotjaGi2g1v0326200.1
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT2G22480.1 phosphofructokinase 5; Swiss-Prot: sp|Q8VYN6|PFKA5_ARATH ATP-dependent 6-phosphofructokinase 5, chloroplastic; TrEMBL-Plants: tr|I1J525|I1J525_SOYBN ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi2g1v0326200 LjG1.1_chr2 80154876 80160539 +
2 domain predictions
3 GO terms
LotjaGi2g1v0326200.2
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT2G22480.1 phosphofructokinase 5; Swiss-Prot: sp|Q8VYN6|PFKA5_ARATH ATP-dependent 6-phosphofructokinase 5, chloroplastic; TrEMBL-Plants: tr|I1J525|I1J525_SOYBN ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi2g1v0326200 LjG1.1_chr2 80155009 80160013 +
3 domain predictions
3 GO terms
LotjaGi3g1v0022100.1
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT4G26270.1 phosphofructokinase 3; Swiss-Prot: sp|Q94AA4|PFKA3_ARATH ATP-dependent 6-phosphofructokinase 3; TrEMBL-Plants: tr|I1M5F6|I1M5F6_SOYBN ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi3g1v0022100 LjG1.1_chr3 2393528 2402115 +
2 domain predictions
3 GO terms
LotjaGi3g1v0022100.2
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT4G26270.1 phosphofructokinase 3; Swiss-Prot: sp|Q94AA4|PFKA3_ARATH ATP-dependent 6-phosphofructokinase 3; TrEMBL-Plants: tr|I1MCW0|I1MCW0_SOYBN ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi3g1v0022100 LjG1.1_chr3 2393590 2399438 +
3 domain predictions
3 GO terms
LotjaGi4g1v0004400.1
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT5G47810.1 phosphofructokinase 2; Swiss-Prot: sp|Q9FIK0|PFKA2_ARATH ATP-dependent 6-phosphofructokinase 2; TrEMBL-Plants: tr|V7CAY4|V7CAY4_PHAVU ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi4g1v0004400 LjG1.1_chr4 745484 752042 +
3 domain predictions
3 GO terms
LotjaGi4g1v0160800.1
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT2G22480.1 phosphofructokinase 5; Swiss-Prot: sp|Q8VYN6|PFKA5_ARATH ATP-dependent 6-phosphofructokinase 5, chloroplastic; TrEMBL-Plants: tr|G7LJ94|G7LJ94_MEDTR ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi4g1v0160800 LjG1.1_chr4 28655619 28666614 -
2 domain predictions
3 GO terms
LotjaGi4g1v0443300.1
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT4G26270.1 phosphofructokinase 3; Swiss-Prot: sp|Q94AA4|PFKA3_ARATH ATP-dependent 6-phosphofructokinase 3; TrEMBL-Plants: tr|G7L7C4|G7L7C4_MEDTR ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi4g1v0443300 LjG1.1_chr4 81675994 81681343 -
3 domain predictions
3 GO terms
LotjaGi5g1v0257100.1
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT5G61580.1 phosphofructokinase 4; Swiss-Prot: sp|Q9FKG3|PFKA4_ARATH ATP-dependent 6-phosphofructokinase 4, chloroplastic; TrEMBL-Plants: tr|I1LCJ1|I1LCJ1_SOYBN ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi5g1v0257100 LjG1.1_chr5 56592013 56601901 +
3 domain predictions
3 GO terms