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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR012935
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.251s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v0978810.1
n.a. Nuclear-interacting partner of ALK [Medicago truncatula] gi|357451453|ref|XP_003596003.1| chr3 13288613 13295866 -
2 domain predictions
2 GO terms
Lj3g3v0978810.2
n.a. Nuclear-interacting partner of ALK [Medicago truncatula] gi|357451453|ref|XP_003596003.1| chr3 13290275 13295866 -
2 domain predictions
2 GO terms
Lj4g3v1784840.1
n.a. Nuclear-interacting partner of ALK [Medicago truncatula] gi|357477585|ref|XP_003609078.1| chr4 25214038 25221783 +
2 domain predictions
2 GO terms
Lj4g3v1784840.2
n.a. Nuclear-interacting partner of ALK [Medicago truncatula] gi|357477585|ref|XP_003609078.1| chr4 25214038 25223505 +
2 domain predictions
2 GO terms
LotjaGi3g1v0142800.1
n.a. Nuclear-interacting partner of ALK; TAIR: AT1G17210.1 IAP-like protein 1; Swiss-Prot: sp|Q6P7H4|NIPA_XENLA NIPA-like protein; TrEMBL-Plants: tr|V7BTC4|V7BTC4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0142800 LjG1.1_chr3 18938933 18947390 -
2 domain predictions
2 GO terms
LotjaGi3g1v0142800.2
n.a. Nuclear-interacting partner of ALK; TAIR: AT1G17210.1 IAP-like protein 1; Swiss-Prot: sp|Q6P7H4|NIPA_XENLA NIPA-like protein; TrEMBL-Plants: tr|V7BTC4|V7BTC4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0142800 LjG1.1_chr3 18939742 18947382 -
2 domain predictions
2 GO terms
LotjaGi4g1v0262300.1
n.a. Nuclear-interacting partner of ALK; TAIR: AT1G48950.1 C3HC zinc finger-like protein; Swiss-Prot: sp|Q80YV2|NIPA_MOUSE Nuclear-interacting partner of ALK; TrEMBL-Plants: tr|I1MUH5|I1MUH5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0262300 LjG1.1_chr4 62549405 62555575 +
2 domain predictions
2 GO terms
LotjaGi4g1v0361800.1
n.a. Nuclear-interacting partner of ALK; TAIR: AT1G17210.1 IAP-like protein 1; Swiss-Prot: sp|Q80YV2|NIPA_MOUSE Nuclear-interacting partner of ALK; TrEMBL-Plants: tr|A0A072U3V1|A0A072U3V1_MEDTR Zinc ion-binding protein; Found in the gene: LotjaGi4g1v0361800 LjG1.1_chr4 74066326 74080852 +
2 domain predictions
2 GO terms