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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR012938
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.014s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0329869.1
n.a. PREDICTED: HIPL1 protein-like [Glycine max] gi|356508614|ref|XP_003523050.1| chr0 172426786 172433344 -
2 domain predictions
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Lj1g3v0438900.1
n.a. PREDICTED: HIPL1 protein-like [Fragaria vesca subsp]. vesca] gi|470130826|ref|XP_004301303.1| chr1 5951804 5952677 +
2 domain predictions
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Lj1g3v0438910.1
n.a. F25A4.24 [Arabidopsis thaliana] gi|5882745|gb|AAD55298.1|AC008263_29 chr1 5953081 5954676 +
2 domain predictions
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Lj1g3v0438920.1
n.a. PREDICTED: HIPL1 protein-like [Fragaria vesca subsp]. vesca] gi|470130826|ref|XP_004301303.1| chr1 5953081 5954676 +
2 domain predictions
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Lj4g3v1600360.1
n.a. PREDICTED: HIPL1 protein-like isoform X1 [Cicer arietinum] gi|502152166|ref|XP_004508796.1| chr4 23551877 23556159 -
2 domain predictions
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LotjaGi1g1v0186800.1
n.a. HIPL1 protein; TAIR: AT1G74790.1 catalytics; Swiss-Prot: sp|Q9SSG3|HIPL1_ARATH HIPL1 protein; TrEMBL-Plants: tr|A0A151S7A0|A0A151S7A0_CAJCA HIPL1 protein; Found in the gene: LotjaGi1g1v0186800 LjG1.1_chr1 36571988 36579663 -
2 domain predictions
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LotjaGi1g1v0186800.2
n.a. Hedgehog-interacting-like protein; TAIR: AT1G74790.1 catalytics; Swiss-Prot: sp|Q9SSG3|HIPL1_ARATH HIPL1 protein; TrEMBL-Plants: tr|A0A1J7G9R5|A0A1J7G9R5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0186800 LjG1.1_chr1 36572740 36576946 -
2 domain predictions
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LotjaGi1g1v0186800.3
n.a. HIPL1 protein; TAIR: AT1G74790.1 catalytics; Swiss-Prot: sp|Q9SSG3|HIPL1_ARATH HIPL1 protein; TrEMBL-Plants: tr|A0A151S7A0|A0A151S7A0_CAJCA HIPL1 protein; Found in the gene: LotjaGi1g1v0186800 LjG1.1_chr1 36572740 36578796 -
2 domain predictions
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LotjaGi1g1v0187500_LC.1
n.a. Hedgehog-interacting-like protein; TAIR: AT1G74790.1 catalytics; Swiss-Prot: sp|Q9SSG3|HIPL1_ARATH HIPL1 protein; TrEMBL-Plants: tr|A0A151S7A5|A0A151S7A5_CAJCA HIPL1 protein; Found in the gene: LotjaGi1g1v0187500_LC LjG1.1_chr1 36737626 36745722 +
2 domain predictions
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LotjaGi4g1v0244400.1
n.a. HIPL1 protein; TAIR: AT1G74790.1 catalytics; Swiss-Prot: sp|Q9SSG3|HIPL1_ARATH HIPL1 protein; TrEMBL-Plants: tr|V7CB37|V7CB37_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0244400 LjG1.1_chr4 59591479 59600969 -
2 domain predictions
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