Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0186800 |
| Transcript ID | LotjaGi1g1v0186800.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | HIPL1 protein; TAIR: AT1G74790.1 catalytics; Swiss-Prot: sp|Q9SSG3|HIPL1_ARATH HIPL1 protein; TrEMBL-Plants: tr|A0A151S7A0|A0A151S7A0_CAJCA HIPL1 protein; Found in the gene: LotjaGi1g1v0186800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:36572740..36578796) extracted from Lotus japonicus Gifu genome v1.2.
ATGAAGGGTGTTATTTCCATCACGTTCTTGATTTGTTGCTTGCTTCTGCTTTTGGAATCTTCAATTTCACTTCCCCTATG CATTGATTCGAGTGAGTTTCTACTACTCTTCTTTTTGTTTTATTTATCCACTAAGGTTTAATTTGTTTAGACATTTATGG ACTCAACAAGCTCAATTCCCAATCTGTCTTGTTTTATTTTAATTGTGGTTGTTTATTTCTTGGTTTAGGAGCACCCTTTA CACTGAATAATACAACAACACCTGGGTTTTGTCCTTACAATGGAAGCACGTGTTGCAACTCCACAGAAGATGCACAAATA GAGAAGCAATTCCGAATGAGGAACATTTCTGATTCTGCTTGTGCCTCGGTTGTGAAATCAATACTTTGTGCGGTAAGATT CTTCTTTATTTTCCCCAAAAAGCATATATTCAGAAGAGGACCCAGAAAAATGGTCTTTTTTTTGCCTCCTCAATTGCGGT ATGAAAACAATTGAATACAGGTAAAAAATATGAAAATGAGAAAATAACACATCTAAAGCATACACTTCTCATTGAAGTAA CAGGTTGCTACTTCAACCAAAAACAGTCCATAAACTCATCCAGGGAAATGTTTATTTTTTCTTTTTTGTCCCTGAAATTC GGGTATACTAAGGAGTTAGAACCTCTTTTGGATGAAGATCAAAGAGTACTTGTTGGAGCTTATCTAGTGTTTTTCTAGTA GATAAGTTTTAATAAGTGTTCTTTCATCCGTATCCAAACGGGTGGCTTTTAGTGCATGTTTAGAAACTCTTCTATAATTT ATTCTGAAGTCCAAATCAATTATGAGAAGAACCGAAGAAGCTATTTGTGAGTAGCTTTTGGATTTCAGAATTGATTTTAA TGAAAGAGCAGCTAATCCACATGCTATTAGTCATTATAGAAACTAACAAATCATTTCTAAGTTTGATCTCTCCTTTTAAT CATTAAAATTAACTAGAGACTAATAAAATATGAGTAAGCTTGGGGGGAAAGGGTAGTTCACTTGGTGAGCTAAGGGAAAT GAAGGGATTTGCAGGGTGAAGGGTCAGGGTTCAAACCCTGGCGAAGGAACTAATTTACTAACAATTAACAACTTACAATT GCCTATAAAACATTATATGAGTAAGCTTGAGGCTCAAAAATCTTTTCTTCTCATATATGGATACAGCACTGCACAACACT CAAAACTTATTTCAAACAATTTTTTTCATGCATGGAAAGCTTATTGTCATGGCTATAATTTCCTTGAAGCTATCTGAAGC AAAATATTGAATAGGTAGAGGAATTTCCGTCCTTTGTTAGTGACCAAATTTAGTGAGTTCTGATTATGCCATCTCTGCTA GTAACCACTGTTACACTTCTCTTTCCATAGTAACTTACTAACTTATGCTCTGGATTCATTTCTTTGCTACATTTGTTTCC AGAGGTGTGATCCATTTTCAGCGGAGCTATTTACAGTTCAATCCACACCCAGGTCAGTTCCAGTGCTTTGCAATTCAACC ATACCAACAAATTCTTCTCAGTCAAAGGCAAAAGAAGAGGATTTCTGCACTCAAGTATGGGACACATGTAAAACTGTATC CATAGTGAACTCTCCATTTGCACCTTCATTACAAGGCCAGGCAGGAGCACCTGTTCATGCCAATGCCACCAAATTAACTG AACTATGGCAGTCGAAAACTGATTTCTGCACCGCATTTGGTAGAGAATCTGATAACTCATCAGTGTGCTTTGAAGGGGAA CTTGTTTCACTGAATAAAACTGAGACGGCTCCTGTTACGCCCCCTCGTGGCGTGTGCTTTGAGAAAATTGGCAACGGATC TTATCTCAGCATGGTGGCTCATCCTGATGGCTCGAACCGTGCATTCTTCTCCAACCAAATGGGGAAGGTTTGGCTGGCGA CACTTCCGGATCAAGGCTCAGGAGGCGCAATTGAGCTTGATGAGTCAAGCCCCTTTGTTGATCTCACTGATCAAGTCTAT TTTGATACTCAGTTTGGAATGATGGGCATGGCCTTTCATCCAAATTTCTCGCAAAATGGCCGGTTCTTCGCTTCATTCAA CTGTGATAAGTCCAAGTGGTCAGGATGTACCGGAAGATGCGCGTGTAACTCGGATGTTAATTGTGATCCATCAAAGATAG GTACTGATCATGGTGCACAGCCATGCCAGTATCAAACTGTTATTGCAGAATATACTGCTAATGGAACCGCATCTCAGCCT TCTTTGGTACATAACTTTGCAACCATAGAAATGTAGATTGAATGATGGCATTAAGAGCCTGTTTGGATACGCAGCAAAGA ACACTTATTAGAGCTTCTCTACTAGAAAAAGCACTAGATAAGATCCGATAAGTGCTCTATGATCTGCATCCAAACAATCT CAATTCAATGAATGTACCTGAGTTATGAATGTTTTCTTTGCAGGCTGAAAGTGCTAAACCAACTGAAGTTAGAAGAATCT TTACCATGGGACTCCCATTTACCTCTCAACATGGAGGTCAAATACTCTTTGGACCTGATGATGGGTATTTATACTTCATG ATGGGATATGGAGGAGGTCCAGGTGATCCTTACAATTTTGCACAGAACAAGAAATCATTGCTTGGAAAGATTATGAGGCT TGATATAGACAACATCCCAAGTGAGTATAACTTTTTAATTGATAATTTTATATCAAAGTCCAACATAAGTTCCTTTTAGA TCATATCTGTAAAATGTTACATTAGAACAAATTTTTTAATACATTGTTGATAACGTCATATATACTTTTAATAAAATAAA AACAAACAAAAGCTTTGTCCCACTAAGTGACATCGACTATATGGATCATTGGTGGGGGTTAGATTTCCCACCCCCACTTC TAGACTTCACACCTCCCATTTTTGGATTTTTAAGTTCCTAATTATTTCGGAAATTATGTTTCTGAAAAGTGTTTTAAGTG GGGTGGCATTACTAATGAGTGGGGTGTCAAATCCAATCCCCATCATTGTTCTGTATTAACTCATGGCATTGCCATCCATC TTGAATTTTCAGGTGCAACACAAATTAGCAAACTTGGGCTGTGGGGTAGCTACTCCATTCCACAGGACAATCCATATAGT GAAGATGAAGATCTGCAGCCTGAAATATGGGCCTTGGGACTAAGAAATCCTTGGCGCTGCAGTTTTGATGCAGAAAGATC TTCCTACTTTTTTTGTGGAGACGTCGGACAGGTTTGTGATAACGAGCATGTTTGGATCAACTTATTTTTCGTCAAAATCA ATCATGACACCCAGAAGCTACTCACATAAACTTCTCTCCATAATTGATTTTTGCTTTAGTCCGAATTGTATGATGAGCGA TCTAATGGTGTTTAATTTATACAACAATGTATAAAATCAACATATAGTTAGTTGCTCATTTTCGTATTAGAGAAAATTGA ACTTTCTCCTATTGAAAATTTGATTACTTGGTTGTCTTGATTCTTGACATTGTAAAAATATATACACAAGTAACAAGCAC CAGCCTGATTCATGATATCTTTAAATCATACCTAGCAATCTAGCAGAGCACTGTAAACAGGTTTATCATGAATAGACCTT TCTGTACTGTAATTGCAATCTGTTGGGCATTTGAAAGCATTGACATGCTTCTGTAGCATAATGATATTGCTTTTAACATC CCAAGGTAAGTTGCAGGTTCTGTTCTGCTTCAAAAGGAACAAAAAACCACGTTTAAGAGGCGTTTGGATGCTGCTTGTGA GCATCAGAATTGATTATCGAACTGTTAAAATCAATTTTTGGGTGTTTCAATGTTTACTTTTATAATTGATTCTAGATCAA AAATCTATTCTAGGATGAAATTGCAAAAGCTAACTCCTATAGTGGACATGACCAATTGTGTTTACAGCTAGATTTCACAA TGTTACCAAATAGATTTTTTTCACATGAATGTATCCAGATATATTACGCCACTTTCAACCTACTTTTACCGTAATAAACT TTATCAAAATCAATTTTGATAAAACATTGATTCAAACACGCCCTAAGAGAGCATTACTACTTCAAATTTCACATTATTCT TAATGCTTCCAATAAATTACTATCTTAACTTCATGAGAGTTTAGTTGAATATTCTCAGTTACATAATTGATTTGCAGGAT CTTTTTGAAGAGGTGGATCTCATAACAAAGGGTGGAAACTATGGTTGGCGAGCTTATGAGGGCCCCTATATATTCAACGC AACACAATCACCTGGAGGCAATACTTCATTAACATCCATAAATCCAATTTTCCCTATATTTGGATATAACCATTCTGAAG TAAACAAGAATGAAGGATCAGCATCGATTACTGGCGGCTATTTCTATCGCTCTAACACTGATCCTTGCACATATGGCAGG TAAACAAGTTTTCTTCTTCTTTTTCGCAAGAAAAACAGTACAGTTTGACAGGGAAATGTAATAGACTATATAGTTTAAGG ATTATACCTATTGTGAAAAGTAATTTGTAACTTTCATTTTTCTCCTCAGGGTGATTTCTATTTGTCTGAGTGAATTCTTA AAATTTTCCATAACATTACTAGTTGTTCTGTACTAGAGAAAGCTTACGTAAGATAATAGCAGAAAGTAAATCCTAGCAGA GCACTCAAAATAGCAAGAATGTCATAAAAGGAATATTCTCATTAATGCTGAAAAAGTTAAGTTGTACAAGCTGATGACCT TCCCTTTTATAGAGGGTGAAGTCATGACATGGATTTTTCCTAAATTTGGGCCTGACAATTAGGGCCCAAATCCCTGTACA TATAAGACAAATCCAAAGGAATCTTCCAGCTGGCTTGTGGGTCCATCATCTAAGGAAGGGCAAAGAAGCTCGTTGTGTCG TACTTCCCGCCATGGCTGTCTTCAATCGTTTGTTGTTCATTTTGGGCGGGCATAATCTTCTTTATGTCCCGCCCAGTCCA CTAGTGTTGTTAAATTAGTACGTACACTGCATGTTTGGATACATGGTGAGTGAAAATCACAGTCGATAGAAGCAACTCCC CTTAGCTTTTGTGGCTGTACACCGTGATTTTGGCTTCACCTTAGTTTTTCTCCATGTTTCCAAACATGCACTTAAAGTTA TAGAAATAGGATTCTCAATCTATTTTTTATGGGTCACATTAATCATCTAATTGGTTTCTATCATCCAAATTAGTCCTCAA CCAGGGATTAAAGAGGACTAATATGACACTAGGAAAATAAACTGAAGACCCTACTGTTATTATTTATGTATATGGATTAA TTTGAAAACCCTTGTAAACATTGGAGATAAGTTTGGAGATAAATTCGAAGACCCTACAGTTTTGGTTTCTATGATACCCA CAATGTATCATACATGAAGGATGTGATTGGTCCACAACAAAAATAATTTATATTTTCATTTTTTTCTTTTTAAATACGGA GGATGTGATTGGTCCACAACCTTTTCGTGTATCATACCCACACAAGTGTTGTGGTATCGTAGCAAGCACCTTTGCAAAAT TGTCTTGTACTAAGTAGCATGCATGACTCATAAATTTTATCTACAATACATACATGTGTGTGTGTGTGTGTGTCTCATGA ATGAAATATTAACAGGTGTTATTTTGCTCATTGTGATCAATTACTGAAATTCAGGTACCTGTTTGGAGATCTGTATGCTG GTGCAATATGGGCAGCCACAGAAGACCCAGTAAACAGTGGAAACTTCAGCACTAGCAAGATTCCCTTTAGCTGTGCACAT GATTCTCCTCTACGATGTGAGTCTGTACCTGGAACCTCTCTTTCAGCTTTAGGCTACATCTTCTCATTTGGTGAAGACAA CAACAAAGATGTTTATATCCTTGCAAGCTCTGGTGTTTACCGAGTGGTTCGTCCGAGTCGCTGCAATTATGCTTGCTCAC TGGAAAATGCAACAACCACTACAAGCCCTACTCCCTCTCCTTCTTCTCCTTCTCATGCTAACCGTTGGAGTAACTACTCT GGGTATTTGTTTTTGCAGTTTTCATCTTTCTTGTTACTTCTGTTGGGTTTTATGTAG
CDS sequence (LotjaGi1g1v0186800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGGTGTTATTTCCATCACGTTCTTGATTTGTTGCTTGCTTCTGCTTTTGGAATCTTCAATTTCACTTCCCCTATG CATTGATTCGAGAGCACCCTTTACACTGAATAATACAACAACACCTGGGTTTTGTCCTTACAATGGAAGCACGTGTTGCA ACTCCACAGAAGATGCACAAATAGAGAAGCAATTCCGAATGAGGAACATTTCTGATTCTGCTTGTGCCTCGGTTGTGAAA TCAATACTTTGTGCGAGGTGTGATCCATTTTCAGCGGAGCTATTTACAGTTCAATCCACACCCAGGTCAGTTCCAGTGCT TTGCAATTCAACCATACCAACAAATTCTTCTCAGTCAAAGGCAAAAGAAGAGGATTTCTGCACTCAAGTATGGGACACAT GTAAAACTGTATCCATAGTGAACTCTCCATTTGCACCTTCATTACAAGGCCAGGCAGGAGCACCTGTTCATGCCAATGCC ACCAAATTAACTGAACTATGGCAGTCGAAAACTGATTTCTGCACCGCATTTGGTAGAGAATCTGATAACTCATCAGTGTG CTTTGAAGGGGAACTTGTTTCACTGAATAAAACTGAGACGGCTCCTGTTACGCCCCCTCGTGGCGTGTGCTTTGAGAAAA TTGGCAACGGATCTTATCTCAGCATGGTGGCTCATCCTGATGGCTCGAACCGTGCATTCTTCTCCAACCAAATGGGGAAG GTTTGGCTGGCGACACTTCCGGATCAAGGCTCAGGAGGCGCAATTGAGCTTGATGAGTCAAGCCCCTTTGTTGATCTCAC TGATCAAGTCTATTTTGATACTCAGTTTGGAATGATGGGCATGGCCTTTCATCCAAATTTCTCGCAAAATGGCCGGTTCT TCGCTTCATTCAACTGTGATAAGTCCAAGTGGTCAGGATGTACCGGAAGATGCGCGTGTAACTCGGATGTTAATTGTGAT CCATCAAAGATAGGTACTGATCATGGTGCACAGCCATGCCAGTATCAAACTGTTATTGCAGAATATACTGCTAATGGAAC CGCATCTCAGCCTTCTTTGGTACATAACTTTGCAACCGCTGAAAGTGCTAAACCAACTGAAGTTAGAAGAATCTTTACCA TGGGACTCCCATTTACCTCTCAACATGGAGGTCAAATACTCTTTGGACCTGATGATGGGTATTTATACTTCATGATGGGA TATGGAGGAGGTCCAGGTGATCCTTACAATTTTGCACAGAACAAGAAATCATTGCTTGGAAAGATTATGAGGCTTGATAT AGACAACATCCCAAGTGCAACACAAATTAGCAAACTTGGGCTGTGGGGTAGCTACTCCATTCCACAGGACAATCCATATA GTGAAGATGAAGATCTGCAGCCTGAAATATGGGCCTTGGGACTAAGAAATCCTTGGCGCTGCAGTTTTGATGCAGAAAGA TCTTCCTACTTTTTTTGTGGAGACGTCGGACAGGATCTTTTTGAAGAGGTGGATCTCATAACAAAGGGTGGAAACTATGG TTGGCGAGCTTATGAGGGCCCCTATATATTCAACGCAACACAATCACCTGGAGGCAATACTTCATTAACATCCATAAATC CAATTTTCCCTATATTTGGATATAACCATTCTGAAGTAAACAAGAATGAAGGATCAGCATCGATTACTGGCGGCTATTTC TATCGCTCTAACACTGATCCTTGCACATATGGCAGGTACCTGTTTGGAGATCTGTATGCTGGTGCAATATGGGCAGCCAC AGAAGACCCAGTAAACAGTGGAAACTTCAGCACTAGCAAGATTCCCTTTAGCTGTGCACATGATTCTCCTCTACGATGTG AGTCTGTACCTGGAACCTCTCTTTCAGCTTTAGGCTACATCTTCTCATTTGGTGAAGACAACAACAAAGATGTTTATATC CTTGCAAGCTCTGGTGTTTACCGAGTGGTTCGTCCGAGTCGCTGCAATTATGCTTGCTCACTGGAAAATGCAACAACCAC TACAAGCCCTACTCCCTCTCCTTCTTCTCCTTCTCATGCTAACCGTTGGAGTAACTACTCTGGGTATTTGTTTTTGCAGT TTTCATCTTTCTTGTTACTTCTGTTGGGTTTTATGTAG
Protein sequence (LotjaGi1g1v0186800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKGVISITFLICCLLLLLESSISLPLCIDSRAPFTLNNTTTPGFCPYNGSTCCNSTEDAQIEKQFRMRNISDSACASVVK SILCARCDPFSAELFTVQSTPRSVPVLCNSTIPTNSSQSKAKEEDFCTQVWDTCKTVSIVNSPFAPSLQGQAGAPVHANA TKLTELWQSKTDFCTAFGRESDNSSVCFEGELVSLNKTETAPVTPPRGVCFEKIGNGSYLSMVAHPDGSNRAFFSNQMGK VWLATLPDQGSGGAIELDESSPFVDLTDQVYFDTQFGMMGMAFHPNFSQNGRFFASFNCDKSKWSGCTGRCACNSDVNCD PSKIGTDHGAQPCQYQTVIAEYTANGTASQPSLVHNFATAESAKPTEVRRIFTMGLPFTSQHGGQILFGPDDGYLYFMMG YGGGPGDPYNFAQNKKSLLGKIMRLDIDNIPSATQISKLGLWGSYSIPQDNPYSEDEDLQPEIWALGLRNPWRCSFDAER SSYFFCGDVGQDLFEEVDLITKGGNYGWRAYEGPYIFNATQSPGGNTSLTSINPIFPIFGYNHSEVNKNEGSASITGGYF YRSNTDPCTYGRYLFGDLYAGAIWAATEDPVNSGNFSTSKIPFSCAHDSPLRCESVPGTSLSALGYIFSFGEDNNKDVYI LASSGVYRVVRPSRCNYACSLENATTTTSPTPSPSSPSHANRWSNYSGYLFLQFSSFLLLLLGFM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 702 | 702 | 0.0 | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| PANTHER | 1 | 702 | 702 | 0.0 | – | |
| Phobius | 7 | 18 | 12 | - | – | |
| Phobius | 19 | 23 | 5 | - | – | |
| Phobius | 24 | 685 | 662 | - | – | |
| SUPERFAMILY | 216 | 585 | 370 | 6.54E-23 | ||
| Gene3D | 218 | 608 | 391 | 4.4E-57 | ||
| Pfam | 222 | 528 | 307 | 2.4E-22 | ||
| Phobius | 686 | 704 | 19 | - | – | |
| Phobius | 705 | 705 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi1g1v0186800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…