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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013000
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.661s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj5g3v0615940.1
n.a. PREDICTED: 60S ribosomal protein L4-1-like [Glycine max] gi|356548210|ref|XP_003542496.1| chr5 7975094 7977393 +
2 domain predictions
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LotjaGi1g1v0520000.1
n.a. 60S ribosomal L4-like protein; TAIR: AT3G09630.1 Ribosomal protein L4/L1 family; Swiss-Prot: sp|Q9SF40|RL4A_ARATH 60S ribosomal protein L4-1; TrEMBL-Plants: tr|A0A0S3SSP9|A0A0S3SSP9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0520000 LjG1.1_chr1 104379457 104381914 +
2 domain predictions
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LotjaGi1g1v0520000.2
n.a. 60S ribosomal L4-like protein; TAIR: AT3G09630.1 Ribosomal protein L4/L1 family; Swiss-Prot: sp|Q9SF40|RL4A_ARATH 60S ribosomal protein L4-1; TrEMBL-Plants: tr|A0A0S3SSP9|A0A0S3SSP9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0520000 LjG1.1_chr1 104379480 104382510 +
2 domain predictions
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LotjaGi5g1v0073200.1
n.a. 60S ribosomal protein L4; TAIR: AT3G09630.1 Ribosomal protein L4/L1 family; Swiss-Prot: sp|Q9SF40|RL4A_ARATH 60S ribosomal protein L4-1; TrEMBL-Plants: tr|A0A0S3SSP9|A0A0S3SSP9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0073200 LjG1.1_chr5 12135549 12137794 +
2 domain predictions
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LotjaGi5g1v0073200.2
n.a. 60S ribosomal protein L4; TAIR: AT3G09630.1 Ribosomal protein L4/L1 family; Swiss-Prot: sp|Q9SF40|RL4A_ARATH 60S ribosomal protein L4-1; TrEMBL-Plants: tr|A0A0S3SSP9|A0A0S3SSP9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0073200 LjG1.1_chr5 12135564 12140055 +
2 domain predictions
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