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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013103
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We have found 180 results. Now displaying 1 of 4 with 50 rows per page. This search has taken 0.046s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. PREDICTED: dynamin-2B-like [Glycine max] gi|356522123|ref|XP_003529699.1| chr0 97966111 97995708 -
n.a. reverse transcriptase [Zea mays] gi|15148799|gb|AAK84844.1| chr0 115351757 115353623 -
n.a. PREDICTED: importin-11-like [Glycine max] gi|356568126|ref|XP_003552264.1| chr1 32099431 32103952 +
n.a. retroelement pol polyprotein-like [Arabidopsis thaliana] gi|10177558|dbj|BAB10837.1| chr2 19314392 19317274 +
n.a. gag-pol polyprotein [Glycine max] gi|29423282|gb|AAO73529.1| chr6 26800969 26802177 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00810.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810; TrEMBL-Plants: tr|A0A151SI33|A0A151SI33_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0018100_LC LjG1.1_chr1 2247148 2248279 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151U3B8|A0A151U3B8_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0037500_LC LjG1.1_chr1 5247271 5259850 -
n.a. Pol polyprotein; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|B8YLY7|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0069200 LjG1.1_chr1 9560405 9566650 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00810.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TNK0|A0A151TNK0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0107300_LC LjG1.1_chr1 16684428 16684935 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TIH6|A0A151TIH6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0130800_LC LjG1.1_chr1 21001581 21020390 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TIH6|A0A151TIH6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0130800_LC LjG1.1_chr1 21001615 21019939 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TIH6|A0A151TIH6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0130800_LC LjG1.1_chr1 21010760 21019930 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TIH6|A0A151TIH6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0130800_LC LjG1.1_chr1 21013007 21019939 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151RF77|A0A151RF77_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0134700_LC LjG1.1_chr1 21727012 21737502 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151THK7|A0A151THK7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0135800_LC LjG1.1_chr1 22070933 22071528 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|Q2HU05|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi1g1v0148600_LC LjG1.1_chr1 25434731 25441906 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151U3B8|A0A151U3B8_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0158100_LC LjG1.1_chr1 29350950 29351316 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151QNH5|A0A151QNH5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0163700 LjG1.1_chr1 30903072 30919271 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810; TrEMBL-Plants: tr|A5AR50|A5AR50_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0185400_LC LjG1.1_chr1 36265598 36265905 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151SUC2|A0A151SUC2_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0196300_LC LjG1.1_chr1 39310348 39311127 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|I6ZTT9|I6ZTT9_PHAVU Integrase core domain containing protein; Found in the gene: LotjaGi1g1v0222700_LC LjG1.1_chr1 49907318 49914856 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|Q2HU05|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi1g1v0223000_LC LjG1.1_chr1 50016425 50016793 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|Q2HU05|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi1g1v0226500_LC LjG1.1_chr1 52398046 52399743 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A151SUC2|A0A151SUC2_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0239500_LC LjG1.1_chr1 57139962 57141468 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TFT3|A0A151TFT3_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0240900_LC LjG1.1_chr1 57515142 57518415 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P92520|M820_ARATH Uncharacterized mitochondrial protein AtMg00820; TrEMBL-Plants: tr|A0A1J3IBS4|A0A1J3IBS4_NOCCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0255700_LC LjG1.1_chr1 61676155 61680575 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|Q6L3N8|Q6L3N8_SOLDE Putative gag-pol polyprotein, identical; Found in the gene: LotjaGi1g1v0255700_LC LjG1.1_chr1 61676155 61680575 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00810.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810; TrEMBL-Plants: tr|A0A0K9QAL3|A0A0K9QAL3_SPIOL Uncharacterized protein; Found in the gene: LotjaGi1g1v0255700_LC LjG1.1_chr1 61676155 61680575 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|Q6L3N8|Q6L3N8_SOLDE Putative gag-pol polyprotein, identical; Found in the gene: LotjaGi1g1v0255700_LC LjG1.1_chr1 61678846 61679907 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151RG72|A0A151RG72_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0256600_LC LjG1.1_chr1 62133106 62133504 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00810.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810; TrEMBL-Plants: tr|A0A151TAJ8|A0A151TAJ8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0259400_LC LjG1.1_chr1 62865315 62865750 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151THK7|A0A151THK7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0269700_LC LjG1.1_chr1 65781409 65782011 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151SEK6|A0A151SEK6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0296800_LC LjG1.1_chr1 71868880 71870952 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151RUP0|A0A151RUP0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0334700_LC LjG1.1_chr1 79332415 79332733 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151SEX3|A0A151SEX3_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0348800_LC LjG1.1_chr1 81780781 81787832 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TJC6|A0A151TJC6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0377900_LC LjG1.1_chr1 85752787 85757679 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151QUV8|A0A151QUV8_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0399900_LC LjG1.1_chr1 88731835 88733704 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151U3B8|A0A151U3B8_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0406700_LC LjG1.1_chr1 89555181 89556049 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J3CAE7|A0A1J3CAE7_NOCCA Copia protein; Found in the gene: LotjaGi1g1v0427800_LC LjG1.1_chr1 92217087 92219213 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00810.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810; TrEMBL-Plants: tr|A0A151SNV0|A0A151SNV0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0453200_LC LjG1.1_chr1 95376621 95377999 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810; TrEMBL-Plants: tr|A0A151SI33|A0A151SI33_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0454900_LC LjG1.1_chr1 95701893 95703032 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151REJ2|A0A151REJ2_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0521400_LC LjG1.1_chr1 104576365 104604824 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|Q2HU05|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi1g1v0536800_LC LjG1.1_chr1 106551496 106552031 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A5AYJ3|A5AYJ3_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0537600_LC LjG1.1_chr1 106589355 106592833 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TIH6|A0A151TIH6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0538100_LC LjG1.1_chr1 106628610 106629705 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151THK7|A0A151THK7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0542000_LC LjG1.1_chr1 107057632 107080487 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A5ARX9|A5ARX9_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0615100_LC LjG1.1_chr1 116173183 116173537 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A5B683|A5B683_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0615200_LC LjG1.1_chr1 116184525 116185611 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151THK7|A0A151THK7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0658200_LC LjG1.1_chr1 121898970 121899279 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810; TrEMBL-Plants: tr|A0A151SI33|A0A151SI33_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0669100_LC LjG1.1_chr1 123177018 123178218 +