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LotjaGi1g1v0069200.1

Overview

Field Value
Gene ID LotjaGi1g1v0069200
Transcript ID LotjaGi1g1v0069200.1
Lotus japonicus genome version Gifu v1.2
Description Pol polyprotein; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|B8YLY7|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0069200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:9560405..9566650) extracted from Lotus japonicus Gifu genome v1.2.

TTGTGGCCAAAATTTAGTCCAAGAATACAGCTATTAAAAGCCTGCAAACTAGTGGCCAATTACTTGGTAAATTAGAACAA GTAATTGACTAGGAAGTGAAGAGATAGAAGCAAAGCTGGCAGTGAAGAGGCGGTGGATTGTGTCCTATAAATAGAGAACA TATTCATTTGTTTCAAATCATCTCAATCTCACATAGCTGAATTGTTAGAGACAATATACACCACCAACAAAGCAATTCAA CGTGAATTGCTGTTTGAGAGAAAAAGTCCAGAGAGGAAAAATTAGTATTTCCCTTGGTAAGGTTCTCCTAGTGAGTGTAT TCTTGTTCTATAGAGCTGTTGTAATTTCTTCCACATAGTGAAAATCTTTTCTACCGGTGCCCGTGGTTTTTTTTTTTTTT TTTTTCCTTTATTTGTTGAGGGTTTTCCACGTAAATATTGTGTGTCAATTTCCTACTCTCTTATCTCTTATTTTAGTTGC GTGACATTATCCTGCTACTCTGGTACCCAACAGTGGTATCAGAGCTGTTGGTGTCGGTCCTTATTCCGCTGCGGTGTACG GTTACTATTCACACGTGTGGTTGTATACTCTTGCAGTGATTGTTAACGTATACTAGATCTATTCTAGTGTGCGGTAAAAA TATACAATACTGCTCACGTATACTATGCTATTCACGGTGAAATTGTGTAAACCGGTTCCGTGAAAGAAAAAAATGGCAGC AAAATTTGAGATCCCGAAATTCAATGGGAGTAACTTCTCCCTGTGGAAATTGAAGATAAAGGCAATCCTGAGGAAGGATA ATTGCTTACCAGCAATTGACGGTAGACCTGCTGATATAACTGATGAGAAGTGGAAAGAGATGGACGACAATGCTGTAGCC AATTTGCACCTAGCAGTGGCAGATTCAGTTTTGTCTAGTATTGCTGAAAAGAAAACAGCAAAGGAGATCTGGGATACTCT TATCCAACTGTACGAGGTCAAGTCACTTCACAACAGAATTTTCTTAAAGAGGAGACTCTACACTCTTCGAATGAGTGAAT CCACTTCGATGCCGGATCACATCAACAATCTGAACACAATGTTTGCTCAACTATCTGCATCAGATTTCACAATTGGAGAA AATGAACGTGCAGAGGTTCTTCTTCAGAGTTTACCAGATTCATATGATCAACTCGTCATCAATATTACAAACAATAATAT TGTTGACCGTCTATCCTTTAATGATGTTGCCGGAGCTATTCTTGAAGAAGAGTCCAGGCGGAAAAATAAGGAAGATCGTC AGGAGAGCTCAAAACAAATGGAAGCTTTGACGGTGACGAGAGGCAGATCAACGGAGCGTGGCCCCAGTGGGAGTCAGAAC CATGGTAGATCAAAATCTCGAAGAAAGACAAATCTCAAATGCTACAATTGTGGCAAGAGAGGGCACTTGAAGAAAGATTG CTGGTCCAACAAGAAGAGTAGTGAAAAATCTTATGAAGCAAGTACATCTCAAGGATGTGTTGCTAGTACCTCTGATGATG GAGAAGTCCTATACAGCGAAGCAGCAGTTAGTACCAAAGGCAAAAATCGTCTCACTGATGTTTGGATAGTAGATTCAGGA GCAACATGGCACATGACCCCACGACGAGATTGGTTTTGCACTTATGAGCCTGTCTCAGAAGGAAACGTGTTCATGGGAAA CGATCATGCCTTGGAAATTGTTGGAATTGGTACTGTCAAAATAAAAATGTATGATGGTACCATTCGCACACTTCAAGAGG TACGACATGTGAAAGGGTTAGCAAAGAATTTGTTGTCTGTTGGGCAACTAGATGACCTCGGATACAAGTACGATATTCAA GGTGGGATCTTGAAAGTGGTGAAAGGTTCGCTAGTAGTAATGAAAGCAAAGAAGGTCGCTGCAAATCTATACATGCTTTT GGGAGATACGTGGCAAATGGCAGACACATCAGTTGTAGTTGGAAGCCAAGAAGAAACAACGATGATGTGGCATCGCAGAT TAGGCCATATGTCGGAACGAGGCTTGAAAGTTCTTGCAGAACGTAATCTCATCCCTGGGCTCAAGTCAGTAAGTTTACCT TTCTGTGAGCATTGTGTGATAAGTAAGCAGCATAGACTAAAGTTTGCTAAGTCAACTGCTAGAAGCAAACACATACTGGA CTTGATCCATTCTGATGTGTGGGAGTCACCGGAAGTGTCCATAGGAGGAGCAAAGTATTTTGTATCATTCATTGATGATT ACTCCAGGAGATTGTGGGTGTACTCGATCAAGAAGAAGTCAGGTGTGTATTCAGTATTCAAGGAGTTCAAAGCACAAGTA GAACTTGAAACTGGGAAAAGAATTAAGTGCTTGAGGACAGATAATGGAGGAGAATATACAGATGGTGATTTCCTGGCATT CTGCAAGCAAGAAGGTATTACGAGGCAATTTACAGTTGCTCATACACCTCAGCAGAATGGAGTAGCAGAGCGGATGAATA GAACTCTTCTGAAGAGGACAAGAGCTATGCTGAGAACAGCGGAATTAGGCAAGTCCTTCTGGGCAGAAGCTGTCAAAACT GCCTGTTATGTGATAAATCGATCGCCATCAACTGCGATTGATTTAAAGACACCAATGGAGATGTGGAAGGGAAAACCAGG TAATTATTCTTCTCTACATGTGTTTGGATGTCCTGTGTATGTAATGTTCAACTCCCAAGAAAGAACAAAGCTGGATCCAA AATCCAGGAGATGCATATTCGTGGGTTATGCTGACAATGTAAAGGGGTATCGTCTGTGGGATCCCGCTGCCCACAAGATT ATTGTCAGCAAAGATGTAATCTTTGTAGAAAATGAATTACAAAAAGAGCAGAAAAATGATGGCACTACAATGGAGACTGC TACAGTGGAGATAGAGGAAAATTCAGGAGGAGATGATTCTTCTGAAGCAGAGCCAGAGCACGAAGAACAAGAACCAAATG AGGTCAATGATGAAGAACCCAGGAGAACAACACGTCAAATAAGAAAACCATCATGGCACTCAGAATATGTGATGGCAAGT CATGATGCATATTGTCTTCTATCAGAAGATGGAGAACCATCAACCTTTCAGGAGGCGTTAAATGGTTCAGATGCTTCTCT ATGGATGGCAGCAATGCAGGAGGAGATTGAAGCCTTACATAGAAATAATACTTGGGAACTTGTTGAACTTCCTAAAGGTC GGAAAGCCATCGGCAACAAATGGGTGTTCAAAATTAAACGAGATGGCAACGATCAGGTGGAACGCTATCGTGCAAGACTG GTGGTCAAAGGATATGCTCAGAAAGAAGGTATTGATTTTAATGAAATATTCTCTCCAGTAGTAAGACTAACAACTATTAG AGCAGTCTTGACAATGTGTGCCGCATTTGATTTACATCTTGAGCAACTTGATGTAAAGACTGCATTTCTTCATGGAGAAC TTGAAGAAGAAATCTATATGCTCCAACCAGAAGGCTTTGAAGATCATGAAAATGAAAACTTGGTTTGTAGGTTGACCAAA TCTCTGTACGGTCTAAAGCAGGCGCCGAGGTGTTGGTACAAGAGATTTGATTCTTTCATCATGAGCCTTGGATACAACAG GCTGAGTTCAGACCATTGTACGTACTACAAAAGGTTTGATGATAATGATTTCATCATTTTGCTGTTGTATGTGGATGACA TGTTGGTGGTAGGCCCCAACAAAGATCAAGTCCAAGAATTGAAGGCACAGTTGGCTAGGGAGTTTGATATGAAAGACTTG GGACCCGCAAACAAGATTTTAGGGATGCAAATTCACCGAGATAGAAAAGACAGGAAGATTTGGCTTTCTCAGAAGAATTA TCTTCAGAAAGTCTTGCGGCGCTTCAACATGCAAGACTGTAACCCAATCTCAACCCCAATTCCTGTTAATTACAAATTAT CCTCAAGTATGATTCCTAGCAGTGAAGCAGAGAGGATGGAGATGTCTCGAGTACCGTATGCATCAGCGGTGGGAAGCCTT ATGTACGCTATGATTTGCACTAGGCCAGATATTGCTCAAGCAATTGGGACGGTCAGTCGGTTTATGGCAGATCCAGGCAA AGAGCACTGGAATGCTGTGAAGAGGATTCTGAGATACATCAAAGGAACCTCAGGTGCTGCGTTATGTTTTGGGGGATCAG AATTCACTATCAGAGGCTATGTTGATTCAGACTTTGCAGGTGATATTGATAAAAGAAAATCTACTACAGGCTATGTGTTC ACACTTTCAGGAGTAGCAGTAAGCTGGTTATCCAAATTGCAGACTGTTGTAGCTTTGTCTACTACAGAAGCAGAATACAT GGCAGCTACTCAAGCATGCAAGGAAGCTATTTGGATTCAAAGGTTGTTGGAAGAGCTCGGGCACAAGCAACAGAAGATTA TTGTGTATTGTGATAGTCAGAGCGCCCTGCACATTGCAAGGAATCCAGCCTTTCATTCCAGGACAAAGCACATAGGAGTT CAATACCATTTTGTCAGAGAGGTAGTAGAAGAAGGAAGCGTGGATATGCAGAAAATTCACACCAAAGACAACCTAGCAGA TGTAATGACGAAGCCGATCAACTCTGATAAGTTTGCATGGTGTAGGTCCTCCTATGGCCTGTTAAAAACGTAAGCAGCAT AGAACTGGCAAGGTAGAGAAAATTTTGCAGCCTCACAAATGTGGCTTTAAGTGGAAGATTGTCAGCAAATATAATTAAAT TAAAGCCACCAATTGTGGCCAAAATTTAGTCCAAGAATACAGCTATTAAAAGCCTGCAAACTAGTGGCCAATTACTTGGT AAATTAGAACAAGTAATTGACTAGGAAGTGAAGAGATAGAAGCAAAGCTGGCAGTGAAGAGGCGGTGGATTGTGTCCTAT AAATAGAGAACATATTCATTTGTTTCAAATCATCTCAATCTCACATAGCTGAATTGTTAGAGACAATATACACCACCAAC AAAGCAATTCAATGTGAATTGCTGTTTGAGAGAAAAAGTCCAGAGAGGAAAAATTAGTATTTCCCTTGGTAAGGTTCTCC TAGTGAGTGTATTCTTGTTCTATAGAGCTGTTGTAATTTCTTCCACATAGTGAAAATCTTTTCTACCGGTGCCCGTGGTT TTTTTTTTTTCCTTTATTTGTTGAGGGTTTTCCACGTAAATATTGTGTGTCAATTTCCTACTCTCTTATCTCTTATTTTA GTTGCGTGACATTATCCTGCTACTCTGGTACCCAACAAAGAATTGGCGATCAAAGGCATTTTAAAGACACACTACGCTCT CATACTTAGGCTCATTGTCTTGTGGACTGGGCGAGCCCCCATCCCCTAGAGGGACTCGCCTAGGGACGGATTAGATGCAT AAGAAGGAAACCCGCCAAGGGCGAGGGAAAGGACTTAGGAGATTAGTTACCCACTTTAAGGGATTTGGGTCTAGCGTAGT ACTCCTTCCGGTCCTATTTATAAGCATGAAAGAGAAGAAAAATCTTGGTCCTTTTTATAAGAACCAAATGAAAGTTTGAG CTATATTAATTATTTTTTTCCAATGATGCCCTTATTAATTCTAGCTTGTAAAATGTGTCTCATTAATTATTCTCTCTCTT TTTCACTTTCCAACACTAATAACAAAGGGTAATTTTGGAAGTTTATTTTGATTCAAGACATATTTAATGCATTTTATCTA GTTTAACTACATTTCTTAAACTATGTGATTTTTTTTTTTGCTGCTTATAAATAGGACCGGAGGGAGTACGACCCAACAAG CCTCATTAGAAATGAAATTAGGGCTCCATTATAGTGTCTTTAGAAGGTTGGGTGGCGTGTTGCTGTGGATGTTTAAAAAG GAAAACGGATTGCTTATCAATTGAAGAAACCTTGGTTGCATGAAACCCTTACAAGTGCACATCTGATTTAAATAGAAGAA CTTGTGCGAACGATTGACTATGACAGCCCACGCTGTGGAAGAAACGAAAACTGTAGTTTATGAATACCGAGGCATGTTGG CAACAAGCATCACGGTAGAAGGACGAACATATGATATATGTAGTTAATAGGTTTTTGGAAATTGATGTTTGTTACGAATT GTTTTTCAACAAAATGTGAGAATGCATAGGTGGCTCTTTTCTAGTGGTGGTTCAATTGGTTTTTAATTGATACTTATTTT AAAAAAAGACCTGGTGACATATGTACTTAGTCATGAGTTTCGTGAATTAATTATTCTACCTATATAACATCACTCACACA ATCTAT
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0069200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCAGCAAAATTTGAGATCCCGAAATTCAATGGGAGTAACTTCTCCCTGTGGAAATTGAAGATAAAGGCAATCCTGAG GAAGGATAATTGCTTACCAGCAATTGACGGTAGACCTGCTGATATAACTGATGAGAAGTGGAAAGAGATGGACGACAATG CTGTAGCCAATTTGCACCTAGCAGTGGCAGATTCAGTTTTGTCTAGTATTGCTGAAAAGAAAACAGCAAAGGAGATCTGG GATACTCTTATCCAACTGTACGAGGTCAAGTCACTTCACAACAGAATTTTCTTAAAGAGGAGACTCTACACTCTTCGAAT GAGTGAATCCACTTCGATGCCGGATCACATCAACAATCTGAACACAATGTTTGCTCAACTATCTGCATCAGATTTCACAA TTGGAGAAAATGAACGTGCAGAGGTTCTTCTTCAGAGTTTACCAGATTCATATGATCAACTCGTCATCAATATTACAAAC AATAATATTGTTGACCGTCTATCCTTTAATGATGTTGCCGGAGCTATTCTTGAAGAAGAGTCCAGGCGGAAAAATAAGGA AGATCGTCAGGAGAGCTCAAAACAAATGGAAGCTTTGACGGTGACGAGAGGCAGATCAACGGAGCGTGGCCCCAGTGGGA GTCAGAACCATGGTAGATCAAAATCTCGAAGAAAGACAAATCTCAAATGCTACAATTGTGGCAAGAGAGGGCACTTGAAG AAAGATTGCTGGTCCAACAAGAAGAGTAGTGAAAAATCTTATGAAGCAAGTACATCTCAAGGATGTGTTGCTAGTACCTC TGATGATGGAGAAGTCCTATACAGCGAAGCAGCAGTTAGTACCAAAGGCAAAAATCGTCTCACTGATGTTTGGATAGTAG ATTCAGGAGCAACATGGCACATGACCCCACGACGAGATTGGTTTTGCACTTATGAGCCTGTCTCAGAAGGAAACGTGTTC ATGGGAAACGATCATGCCTTGGAAATTGTTGGAATTGGTACTGTCAAAATAAAAATGTATGATGGTACCATTCGCACACT TCAAGAGGTACGACATGTGAAAGGGTTAGCAAAGAATTTGTTGTCTGTTGGGCAACTAGATGACCTCGGATACAAGTACG ATATTCAAGGTGGGATCTTGAAAGTGGTGAAAGGTTCGCTAGTAGTAATGAAAGCAAAGAAGGTCGCTGCAAATCTATAC ATGCTTTTGGGAGATACGTGGCAAATGGCAGACACATCAGTTGTAGTTGGAAGCCAAGAAGAAACAACGATGATGTGGCA TCGCAGATTAGGCCATATGTCGGAACGAGGCTTGAAAGTTCTTGCAGAACGTAATCTCATCCCTGGGCTCAAGTCAGTAA GTTTACCTTTCTGTGAGCATTGTGTGATAAGTAAGCAGCATAGACTAAAGTTTGCTAAGTCAACTGCTAGAAGCAAACAC ATACTGGACTTGATCCATTCTGATGTGTGGGAGTCACCGGAAGTGTCCATAGGAGGAGCAAAGTATTTTGTATCATTCAT TGATGATTACTCCAGGAGATTGTGGGTGTACTCGATCAAGAAGAAGTCAGGTGTGTATTCAGTATTCAAGGAGTTCAAAG CACAAGTAGAACTTGAAACTGGGAAAAGAATTAAGTGCTTGAGGACAGATAATGGAGGAGAATATACAGATGGTGATTTC CTGGCATTCTGCAAGCAAGAAGGTATTACGAGGCAATTTACAGTTGCTCATACACCTCAGCAGAATGGAGTAGCAGAGCG GATGAATAGAACTCTTCTGAAGAGGACAAGAGCTATGCTGAGAACAGCGGAATTAGGCAAGTCCTTCTGGGCAGAAGCTG TCAAAACTGCCTGTTATGTGATAAATCGATCGCCATCAACTGCGATTGATTTAAAGACACCAATGGAGATGTGGAAGGGA AAACCAGGTAATTATTCTTCTCTACATGTGTTTGGATGTCCTGTGTATGTAATGTTCAACTCCCAAGAAAGAACAAAGCT GGATCCAAAATCCAGGAGATGCATATTCGTGGGTTATGCTGACAATGTAAAGGGGTATCGTCTGTGGGATCCCGCTGCCC ACAAGATTATTGTCAGCAAAGATGTAATCTTTGTAGAAAATGAATTACAAAAAGAGCAGAAAAATGATGGCACTACAATG GAGACTGCTACAGTGGAGATAGAGGAAAATTCAGGAGGAGATGATTCTTCTGAAGCAGAGCCAGAGCACGAAGAACAAGA ACCAAATGAGGTCAATGATGAAGAACCCAGGAGAACAACACGTCAAATAAGAAAACCATCATGGCACTCAGAATATGTGA TGGCAAGTCATGATGCATATTGTCTTCTATCAGAAGATGGAGAACCATCAACCTTTCAGGAGGCGTTAAATGGTTCAGAT GCTTCTCTATGGATGGCAGCAATGCAGGAGGAGATTGAAGCCTTACATAGAAATAATACTTGGGAACTTGTTGAACTTCC TAAAGGTCGGAAAGCCATCGGCAACAAATGGGTGTTCAAAATTAAACGAGATGGCAACGATCAGGTGGAACGCTATCGTG CAAGACTGGTGGTCAAAGGATATGCTCAGAAAGAAGGTATTGATTTTAATGAAATATTCTCTCCAGTAGTAAGACTAACA ACTATTAGAGCAGTCTTGACAATGTGTGCCGCATTTGATTTACATCTTGAGCAACTTGATGTAAAGACTGCATTTCTTCA TGGAGAACTTGAAGAAGAAATCTATATGCTCCAACCAGAAGGCTTTGAAGATCATGAAAATGAAAACTTGGTTTGTAGGT TGACCAAATCTCTGTACGGTCTAAAGCAGGCGCCGAGGTGTTGGTACAAGAGATTTGATTCTTTCATCATGAGCCTTGGA TACAACAGGCTGAGTTCAGACCATTGTACGTACTACAAAAGGTTTGATGATAATGATTTCATCATTTTGCTGTTGTATGT GGATGACATGTTGGTGGTAGGCCCCAACAAAGATCAAGTCCAAGAATTGAAGGCACAGTTGGCTAGGGAGTTTGATATGA AAGACTTGGGACCCGCAAACAAGATTTTAGGGATGCAAATTCACCGAGATAGAAAAGACAGGAAGATTTGGCTTTCTCAG AAGAATTATCTTCAGAAAGTCTTGCGGCGCTTCAACATGCAAGACTGTAACCCAATCTCAACCCCAATTCCTGTTAATTA CAAATTATCCTCAAGTATGATTCCTAGCAGTGAAGCAGAGAGGATGGAGATGTCTCGAGTACCGTATGCATCAGCGGTGG GAAGCCTTATGTACGCTATGATTTGCACTAGGCCAGATATTGCTCAAGCAATTGGGACGGTCAGTCGGTTTATGGCAGAT CCAGGCAAAGAGCACTGGAATGCTGTGAAGAGGATTCTGAGATACATCAAAGGAACCTCAGGTGCTGCGTTATGTTTTGG GGGATCAGAATTCACTATCAGAGGCTATGTTGATTCAGACTTTGCAGGTGATATTGATAAAAGAAAATCTACTACAGGCT ATGTGTTCACACTTTCAGGAGTAGCAGTAAGCTGGTTATCCAAATTGCAGACTGTTGTAGCTTTGTCTACTACAGAAGCA GAATACATGGCAGCTACTCAAGCATGCAAGGAAGCTATTTGGATTCAAAGGTTGTTGGAAGAGCTCGGGCACAAGCAACA GAAGATTATTGTGTATTGTGATAGTCAGAGCGCCCTGCACATTGCAAGGAATCCAGCCTTTCATTCCAGGACAAAGCACA TAGGAGTTCAATACCATTTTGTCAGAGAGGTAGTAGAAGAAGGAAGCGTGGATATGCAGAAAATTCACACCAAAGACAAC CTAGCAGATGTAATGACGAAGCCGATCAACTCTGATAAGTTTGCATGGTGTAGGTCCTCCTATGGCCTGTTAAAAACGTA A
Download CDS Sequence

Protein sequence (LotjaGi1g1v0069200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAAKFEIPKFNGSNFSLWKLKIKAILRKDNCLPAIDGRPADITDEKWKEMDDNAVANLHLAVADSVLSSIAEKKTAKEIW DTLIQLYEVKSLHNRIFLKRRLYTLRMSESTSMPDHINNLNTMFAQLSASDFTIGENERAEVLLQSLPDSYDQLVINITN NNIVDRLSFNDVAGAILEEESRRKNKEDRQESSKQMEALTVTRGRSTERGPSGSQNHGRSKSRRKTNLKCYNCGKRGHLK KDCWSNKKSSEKSYEASTSQGCVASTSDDGEVLYSEAAVSTKGKNRLTDVWIVDSGATWHMTPRRDWFCTYEPVSEGNVF MGNDHALEIVGIGTVKIKMYDGTIRTLQEVRHVKGLAKNLLSVGQLDDLGYKYDIQGGILKVVKGSLVVMKAKKVAANLY MLLGDTWQMADTSVVVGSQEETTMMWHRRLGHMSERGLKVLAERNLIPGLKSVSLPFCEHCVISKQHRLKFAKSTARSKH ILDLIHSDVWESPEVSIGGAKYFVSFIDDYSRRLWVYSIKKKSGVYSVFKEFKAQVELETGKRIKCLRTDNGGEYTDGDF LAFCKQEGITRQFTVAHTPQQNGVAERMNRTLLKRTRAMLRTAELGKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKG KPGNYSSLHVFGCPVYVMFNSQERTKLDPKSRRCIFVGYADNVKGYRLWDPAAHKIIVSKDVIFVENELQKEQKNDGTTM ETATVEIEENSGGDDSSEAEPEHEEQEPNEVNDEEPRRTTRQIRKPSWHSEYVMASHDAYCLLSEDGEPSTFQEALNGSD ASLWMAAMQEEIEALHRNNTWELVELPKGRKAIGNKWVFKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLT TIRAVLTMCAAFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFEDHENENLVCRLTKSLYGLKQAPRCWYKRFDSFIMSLG YNRLSSDHCTYYKRFDDNDFIILLLYVDDMLVVGPNKDQVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQ KNYLQKVLRRFNMQDCNPISTPIPVNYKLSSSMIPSSEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAIGTVSRFMAD PGKEHWNAVKRILRYIKGTSGAALCFGGSEFTIRGYVDSDFAGDIDKRKSTTGYVFTLSGVAVSWLSKLQTVVALSTTEA EYMAATQACKEAIWIQRLLEELGHKQQKIIVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTKDN LADVMTKPINSDKFAWCRSSYGLLKT
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Pfam
PF14223
47 186 140 7.1E-36 –
MobiDBLite
mobidb-lite
180 194 15 - –
MobiDBLite
mobidb-lite
180 225 46 - –
MobiDBLite
mobidb-lite
195 217 23 - –
Gene3D
G3DSA:4.10.60.10
200 259 60 4.0E-6 –
SUPERFAMILY
SSF57756
212 249 38 5.93E-7
IPR036875
SMART
SM00343
229 245 17 5.9E-5
IPR001878
Pfam
PF00098
229 243 15 2.6E-5
IPR001878
ProSiteProfiles
PS50158
229 243 15 10.955
IPR001878
Pfam
PF13976
398 466 69 1.2E-16
IPR025724
PANTHER
PTHR11439:SF265
454 945 492 7.8E-163 –
PANTHER
PTHR11439
454 945 492 7.8E-163 –
Gene3D
G3DSA:3.30.420.10
472 653 182 4.2E-33
IPR036397
ProSiteProfiles
PS50994
476 642 167 24.263
IPR001584
SUPERFAMILY
SSF53098
477 636 160 1.1E-42
IPR012337
Pfam
PF00665
480 594 115 1.1E-20
IPR001584
MobiDBLite
mobidb-lite
728 764 37 - –
MobiDBLite
mobidb-lite
731 749 19 - –
MobiDBLite
mobidb-lite
750 764 15 - –
SUPERFAMILY
SSF56672
817 1260 444 5.78E-29
IPR043502
Pfam
PF07727
819 1063 245 2.0E-83
IPR013103
CDD
cd09272
1154 1292 139 1.59257E-75 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003676
Molecular function Nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
Subterm of
GO:0008270
Molecular function Zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
Subterm of
GO:0015074
Biological process DNA integration The process in which a segment of DNA is incorporated into another, usually larger, DNA molecule such as a chromosome.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0069200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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