Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013857
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 12 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.382s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0270259.1
n.a. High chlorophyll fluorescence phenotype 173 protein isoform 1 [Theobroma cacao] gi|508778923|gb|EOY26179.1| chr0 140028930 140035814 +
2 domain predictions
 –
Lj0g3v0270259.2
n.a. High chlorophyll fluorescence phenotype 173 protein isoform 1 [Theobroma cacao] gi|508778923|gb|EOY26179.1| chr0 140028930 140035814 +
2 domain predictions
 –
Lj3g3v2576110.1
n.a. PREDICTED: probable complex I intermediate-associated protein 30-like [Glycine max] gi|356559116|ref|XP_003547847.1| chr3 31561345 31564355 +
2 domain predictions
 –
Lj4g3v2617150.1
n.a. UOS1 [Pisum sativum] gi|20339364|gb|AAM19355.1|AF369888_1 chr4 35538173 35543424 -
2 domain predictions
 –
Lj4g3v2617150.2
n.a. UOS1 [Pisum sativum] gi|20339364|gb|AAM19355.1|AF369888_1 chr4 35538173 35543424 -
2 domain predictions
 –
LotjaGi3g1v0338100.1
n.a. NAD(P)-binding Rossmann-fold superfamily protein; TAIR: AT1G16720.1 high chlorophyll fluorescence phenotype 173; Swiss-Prot: sp|B6SZW0|DCVR_MAIZE Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic; TrEMBL-Plants: tr|A0A0S3T0E3|A0A0S3T0E3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338100 LjG1.1_chr3 71059214 71071272 +
2 domain predictions
 –
LotjaGi3g1v0338100.2
n.a. NAD(P)-binding Rossmann-fold superfamily protein; TAIR: AT1G16720.1 high chlorophyll fluorescence phenotype 173; Swiss-Prot: sp|B6SZW0|DCVR_MAIZE Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic; TrEMBL-Plants: tr|V7AQP0|V7AQP0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0338100 LjG1.1_chr3 71059499 71065002 +
2 domain predictions
 –
LotjaGi3g1v0338100.3
n.a. NAD(P)-binding Rossmann-fold superfamily protein; TAIR: AT1G16720.1 high chlorophyll fluorescence phenotype 173; Swiss-Prot: sp|B6SZW0|DCVR_MAIZE Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic; TrEMBL-Plants: tr|V7AQP0|V7AQP0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0338100 LjG1.1_chr3 71059499 71065002 +
2 domain predictions
 –
LotjaGi3g1v0410600.1
n.a. NADH:ubiquinone oxidoreductase intermediate-associated protein 30; TAIR: AT1G17350.1 NADH:ubiquinone oxidoreductase intermediate-associated protein 30; Swiss-Prot: sp|Q9LQI7|CIA30_ARATH Probable complex I intermediate-associated protein 30; TrEMBL-Plants: tr|I3SKR7|I3SKR7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0410600 LjG1.1_chr3 81436813 81440046 +
2 domain predictions
 –
LotjaGi4g1v0380000.1
n.a. NAD(P)-binding Rossmann-fold superfamily protein; TAIR: AT4G18810.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|O14297|YF1F_SCHPO Uncharacterized protein C9E9.15; TrEMBL-Plants: tr|K7KQJ6|K7KQJ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0380000 LjG1.1_chr4 75919017 75924768 -
2 domain predictions
 –
LotjaGi4g1v0380000.4
n.a. NAD(P)-binding Rossmann-fold superfamily protein; TAIR: AT4G18810.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|O14297|YF1F_SCHPO Uncharacterized protein C9E9.15; TrEMBL-Plants: tr|K7KQJ6|K7KQJ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0380000 LjG1.1_chr4 75919889 75924017 -
2 domain predictions
 –
LotjaGi4g1v0380000.5
n.a. NAD(P)-binding Rossmann-fold superfamily protein; TAIR: AT4G18810.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|O14297|YF1F_SCHPO Uncharacterized protein C9E9.15; TrEMBL-Plants: tr|K7KQJ6|K7KQJ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0380000 LjG1.1_chr4 75919889 75924515 -
2 domain predictions
 –