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LotjaGi4g1v0380000.1

Overview

Field Value
Gene ID LotjaGi4g1v0380000
Transcript ID LotjaGi4g1v0380000.1
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description NAD(P)-binding Rossmann-fold superfamily protein; TAIR: AT4G18810.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|O14297|YF1F_SCHPO Uncharacterized protein C9E9.15; TrEMBL-Plants: tr|K7KQJ6|K7KQJ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0380000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:75919017..75924768) extracted from Lotus japonicus Gifu genome v1.2.

ATTTTTGTGTGGTTCATATGATTCCTGCACTGCAAATATCACCACAGACATAACTAAGCTTATTCGTCTAGAAACTAGTA TACTTTCGAAATGGAATTGTGCTCCACAACTCTATCTTCCCCTGCTTCCACTTTTGTTCTCAATTTTCAGGTAACATTCT TAATGAGTCCTTGGATATTTTTATCAAATGTTTCTTTGCATGAATTAGGAATCTTTTGGTTTAGGTTGTTGTTGTTGTTG TTTGATAATTGATATGATCTTTTTCTTCTTATTGTTCTGTAATTTTCTGAATATCTTTGCTCTTATTTGCTGAAATTGAA ACTCCCCACTTCATCATAGCTAGTGCAAGTTTGATATCATTTTTGCCTCATTTTGTAGGGACCTAAATTGCCTAAACCAT TTCTTCAGATATATGGTAGGCAAAAGACATTAGTTTATGAACAAACCTCAACCAGACTCTCTTCTGGAACATGCAGAGCA ACCATATCAGCTGAAGCTGGAAAACAAGGTTGGGATTTTGGAAGATTTATAAAAACACTTTACTTCTTCAATGGACCTCC ATCTCCTGCTAAGGTAGCTAGCATTTTATTCAATTTTGAACTATTAGAAAGAACAATAGAGAAGTGAAAAACAAGAGAGA AAGCTTGGTATGGATCAACTAATGAGTGTTCGTCATTTCTGAATTGTGAAGTTCTTTGACTTTCTAGTTGAGAAGCTATC CAGCCCTTCCCCAAGTGAACCGGTTAGCTCGATGGGAACTTCTGATATTGTCCTGGTAGCTGGAGCTACTGGTGGTGTTG GTCGAAGAGTGGTTGATGTATTGCGGAAGAAAGGAATTCCAGTCCGAGTATTGGTATTGTTGTTGCCTTACCTTGCCAGC ATGATTTCATTGTATATCGTAGTTTCTAGAGAAAAAAAATCCCAATTTAAAATAAAGGAAAAAGTACAGTATTTTAATCT GTTAGTTACTGAGTTCAGTGTATAACAAATATTAAATTTCTGTATCAATATTGATCAGGTTAGAAATGAAGAGAAGGCAA GAAGGATGTTAGGCTCAGATGTTGATTTGGTGAGTTACTTTATTTGAAAGTACTGAAATACTTTATAGATGATCCAATGA ATAAATAGTTTCTGAAAATTGGTATGTTGGATTTTGAGTTATCATTTTGTTGACATTGATATGTTGTTGGACCTAAACAT GATGGAGCTGCCCATGATTGAAGATAGGTGTTAGTTCAGGAGGGTATGTGTTTGGATAGGAAGTGATAATCAATTGTCTT CCTGCCATCAACAAATTCTTTACTAATTTTCGCATTGAAGATTTACCGGTTTCAAGACTTGTGGGTGGAATGTAATAATT TTCATCAATGCAGATTGCAGAACCTTCCTGTTCTTTATACTTTTAGAGTAAATGGGTATAATGTACTACATAAAAGTTGA TATTTCTAATCTTTATGCTATTTTTCTATGCTTCCAACTGACCTTTATGCTTAAACAAAGGTGGTTGGAGACATCACAAA AGATAGTACTTTGGTCCCTGAATACTTTAAAGGAGTCAAGAAAGTGGTCAATGCTGTTTCTGTCATTGTTGGCCCTAAGG AAGGAGACACGCCCGACAGAGCAAAATACAGCCAAGTATGTGCATTAGCTTTATCACGACATTAGAAAGCTTATCTATCA CTGAGAATTGAATGTTAATGTTGACTTATATCACCTGATTGCTTTTCTCAATTATTTCAGTTTATTGATTGTTTGAAGGC TTTATAATTATTTCTGTAGCTGAATGAATTTTTTGTTTTGGTGCAGGGAATTAAGTTCTTTGAGCCAGAGGTAGCTAACT GGTTTTCCTTTCTGATGACACTACCTTCCGAGTCAGATTTGTTACTTTTCTATCTAATTTGGAAGTCCAGTTGGTCCACA AGCTCATTATGTGAAATTTTGGAAACTATTTTCTTAGATATTGATTAATTGAAACAGATAAAAGGTGATTCACCTGAAAA GGTGGAGTACATAGGAATGAAAAATTTGATCAAGGCTGTGAAGGACAATCTTGGACTTCGAAGGGGAAAGCTATTGTTTG GATTTGAAGGTAGATTCCTAGCTAACATATTGGATATCAATTTACTTCTATGCATCCTATTGATAATACTATTTTATTCT TCCGTGCAGACAATAATTATAGGCAGCTTTCTTTTGGCGCTTTAGATGATGTGGTAATGGGAGGAGTTAGTGAAAGTACA TTTCTAATTGACCCAAGTGGTAATGAAAATGGTGGACCAACTGGGGTTTTTAAAGGTATGTGTCCAATTCTAGCAAATGT TGCGTGCCTGTGATATTTTGGAGACTAGCATAACTTGTCTTCTTTGTTTCAATGCTCAAAATCATATAACTGTTTGTCTA GTCCAGGTGTTGTTTCAACGGCGAATAATGGTGGCTTTACAAGTACAAGAACAAAGGTAAACTGCAATTAATTTTATTAA ATTTTCAATGAGGTCTCACAGAAGGCAATGGCATAGTGTTGAGTAATTGCCACTTGATTCAATACATAGACCACTATATG GAAATAATATGCCTGTAAATCTATGTCAAAAAAAAAATATGCCTGTAAATCTGTAATTATTTCTCTGTTTCTGATGTGTT CCTGCCTACAACGATCGGTTATTATTGTTGCCTGTGATGAGCATATGTTGTGATTTCACTTTAACTAATTAACTTGGAAA CTAAGTTCTTCAATGAAAAAGAGAGCTTAATATAATTGGTTTTCACTTTTCAGAATTTCTCAAAACCTGAGGATCTTTCT GCATATGATGGCTTGGAGTTCCGTCTAAAAGGTGATGGGCGTAGATATAAAGTCATTGTTCGCACAAGCAGTGATTGGGA TGCTCTTGGTTACACTGCAGGCTTTGACACGGAGAAAGGCAAATGGCAATCGGTAGTTAACATCTAATAGAATAGTTACA GTCTAGACAATCAACTAACAACTCTCAAGGTTTTAATTCTTTTGTCTTCTACAGATTCAGGTCCCATTTTCTTCCCTGAG GCCTATATTTCGAGCAAAAACAGTGTCTGATGCTCCACCATTTGATCCAAGCATTGTTATGTCATTGCAGGCATGGCTCT GCTTAGTATTTCTAGGTCTTTTAGCTAGCAATCTCTCACACTGGTTGTTAATAACAAAGTGAAATTCTCTGCAGCTCATG TTCAGCAAGTTTGAATATGATGGTAAATTAAATGGAACTTTTGTGGAAGGTCCATTTGAGCTTCCTGTATCTAGCATTCG GGCGTACATAAAGGATCCAATAACGCCCAGGTTTAGCCTTATCCTTTTGACTATCTTTCCACTCCGTTTTTCACTGATAT GCTTAATCTTTTGTTGCACACTTTCTTTGTGTCACATTTAGATTTGTACACGTGGGTTCAGCTGGAGTTACCAGACCTGA AAGGCCTGGACTTGATCTAAGTAAACAGCCTCCGGCTGTTCGATTAAACAAGGAATTGGGTTCTATCCTTACATTTAAAC TAAAGGTAAGAAAAAAAACTGGTGATGACTCCTTGTTTGTGACAGATATAGTACCAAATTTTCAGGTCTCCAGTTTGCAT AAAATTGGTGTATATTAGGTCTTTGCTCTGCAAAACTGGTTTTATTGCTTAAGATTTTTTCAGATATGAAACTAGAAGCT GAAATTTAGCACCCTAGTACTGTTCATTGAGATAGAGCTAGCCATCAGAAATTCTATTTTTAACTCTCCAGATATGCTTA ACATCTTCAATATCTATTGTATTGGTTGTATCTTCTTGATTGAAAATGTAAGAATAATATGCTGGTTTAGTGATAGAGGT TAAGTAAACTACTTACCAAGCGGACCATCTAATTATGAGAAATCTGAAAGGTCGAGCTAAAGTGTATTGTTTTAGCTGAA AAGTGCACATTTGATGGTGTGTTCGCTACATATTTTCAGATGATATTTACACATGAAAATTCCCTTGTATATCTCATATG ACTGATATGAGTAACAAATTGTTAAACTGTTTTCACCACATAACCCACTTGCCGAGATGGTAGGGCTAGTTGATTAACCA TGTGTGAACATATTTAACTAATATACAACAATTGAAATTTGAAATTTTCTGTAGTTTCAGAGTGACTTTAGAGACTTGCA GAAGTAGAGAAATTCTACTTCATAAAGAGATGTTCAATAAACCTTATTGTTTATGATAACTTATTTCCATATCCTATTGT CACTTCACGCATTTCTTCATTTGCTAACAGTGGTTAGTGTTGCAACAGGGTGAGGACTTAATTCGAGAAAGCGGCATTCC CTATGCAATCGTGAGGCCTTGTGCATTAACTGAGGAGCCTGCTGGAGCCGATCTTATCTTTGAACAAGGAGATAATATTA CGGTATTTTGAAAACAAAAGATAATGGATGCTTTTCTAAGTTCCAGTTCTCTTGCTGAACTCCCTATCTCACAATGTGAA AAATAACAGGGTAAAATATCAAGGGAAGAGATTGCTCGTTTGTGTGTAGCTGCACTTGAAAGCCCCTATGCATGTGACAA AACATTTGAGGTCAGCCTTTTCCTTATTATCTCCATATAATGTAAACTAATGTGAAATACCACAACCACAGTTTATTGCT TTTTTAATATGCTCAAAAATCAAAATAGTCCTTAGTTAACTCTAACATTATGAGTTAGCCTCTGGGATTATATTAGGTCT GATCCTATTGCAGGTCAAAAGTGTTGTTCCATTTAGCGAGCCGTTTACTCTGGATCCAGCAAATCCTCCTCCGGAAAAGG ACTACAATGTGTACTTTAAAGATTTAAAAGAAGGAATCACTGGGAAGGAAGCCCTCCAACAAAATCCCGTACCTGTTTAG TGTTTTCCTGCACTGCAGTTCAGCTATGAATATTGCAGAGGTGAGGAAGTTGAGAGATGCACATAATCTGTGTATCTAAA GAAACTTAAACTGTAGACAAATCTGTGATACTTTTCAAACTAGACATGACATTTACCTTAAAAGATGCATGTATATTCAT AGTGCTTATACATAGTTTGTTTTTCCTTACTTGCTTTATCAGATAGGAACCCACAGAACTTCCATATTCATAGTTTGTGC TCATATTGGTATTTACCAATTTCTTCTGATTCTGAATTGTAAGGTTCCAAAAGATTATTAAAAATAAATTCTTTATATTG AGTTCAAATATGATGCACATTTACAAGTTTTTAGTTGTAATTGTAAACAAGAAGTGGCACACTATTTTAGTAACTTGTTT TCACTTACATTTAATAATTGAATAATTGTTTAAAACATATGACACCATATAGCCCATTACAATAAACCATGTTGTAATCA TTTACCAGTATCCTTCACAGACACCATTTTTTCTAAGTGATAAACTAATTTAGGTATTTACAACTAATACTCATTGAGGA ATGAGGAGGTAAGAACTATGAAGGAGGGTCTATTAGCCATCTCCTGTACTTGATGGAAATAATATTAGATGCCACTGTTT ACCCTACTAAACTGGTAGCTGCTTAGCTGACATTCGAAGTAGCGATGTGGAAATTATAAAGCCTATCCTTGCGAAGAGCT TTGTCATTTAGTGCATGTATAGAAACTCATTCGAAAAACTCAGTGAAGTTAAAAATATAGTAGAAATAAGTAAAAATTAA GGGAAGTTGCTGAGTTCTTTGTCAGCCATTGACACTGTTAAAAGCCTTTTTCTCCTTGATATACACATGCAG
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0380000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAATTGTGCTCCACAACTCTATCTTCCCCTGCTTCCACTTTTGTTCTCAATTTTCAGGGACCTAAATTGCCTAAACC ATTTCTTCAGATATATGGTAGGCAAAAGACATTAGTTTATGAACAAACCTCAACCAGACTCTCTTCTGGAACATGCAGAG CAACCATATCAGCTGAAGCTGGAAAACAAGGTTGGGATTTTGGAAGATTTATAAAAACACTTTACTTCTTCAATGGACCT CCATCTCCTGCTAAGTTCTTTGACTTTCTAGTTGAGAAGCTATCCAGCCCTTCCCCAAGTGAACCGGTTAGCTCGATGGG AACTTCTGATATTGTCCTGGTAGCTGGAGCTACTGGTGGTGTTGGTCGAAGAGTGGTTGATGTATTGCGGAAGAAAGGAA TTCCAGTCCGAGTATTGGTTAGAAATGAAGAGAAGGCAAGAAGGATGTTAGGCTCAGATGTTGATTTGGTGGTTGGAGAC ATCACAAAAGATAGTACTTTGGTCCCTGAATACTTTAAAGGAGTCAAGAAAGTGGTCAATGCTGTTTCTGTCATTGTTGG CCCTAAGGAAGGAGACACGCCCGACAGAGCAAAATACAGCCAAGGAATTAAGTTCTTTGAGCCAGAGATAAAAGGTGATT CACCTGAAAAGGTGGAGTACATAGGAATGAAAAATTTGATCAAGGCTGTGAAGGACAATCTTGGACTTCGAAGGGGAAAG CTATTGTTTGGATTTGAAGACAATAATTATAGGCAGCTTTCTTTTGGCGCTTTAGATGATGTGGTAATGGGAGGAGTTAG TGAAAGTACATTTCTAATTGACCCAAGTGGTAATGAAAATGGTGGACCAACTGGGGTTTTTAAAGGTGTTGTTTCAACGG CGAATAATGGTGGCTTTACAAGTACAAGAACAAAGAATTTCTCAAAACCTGAGGATCTTTCTGCATATGATGGCTTGGAG TTCCGTCTAAAAGGTGATGGGCGTAGATATAAAGTCATTGTTCGCACAAGCAGTGATTGGGATGCTCTTGGTTACACTGC AGGCTTTGACACGGAGAAAGGCAAATGGCAATCGATTCAGGTCCCATTTTCTTCCCTGAGGCCTATATTTCGAGCAAAAA CAGTGTCTGATGCTCCACCATTTGATCCAAGCATTGTTATGTCATTGCAGCTCATGTTCAGCAAGTTTGAATATGATGGT AAATTAAATGGAACTTTTGTGGAAGGTCCATTTGAGCTTCCTGTATCTAGCATTCGGGCGTACATAAAGGATCCAATAAC GCCCAGATTTGTACACGTGGGTTCAGCTGGAGTTACCAGACCTGAAAGGCCTGGACTTGATCTAAGTAAACAGCCTCCGG CTGTTCGATTAAACAAGGAATTGGGTTCTATCCTTACATTTAAACTAAAGGGTGAGGACTTAATTCGAGAAAGCGGCATT CCCTATGCAATCGTGAGGCCTTGTGCATTAACTGAGGAGCCTGCTGGAGCCGATCTTATCTTTGAACAAGGAGATAATAT TACGGGTAAAATATCAAGGGAAGAGATTGCTCGTTTGTGTGTAGCTGCACTTGAAAGCCCCTATGCATGTGACAAAACAT TTGAGGTCAAAAGTGTTGTTCCATTTAGCGAGCCGTTTACTCTGGATCCAGCAAATCCTCCTCCGGAAAAGGACTACAAT GTGTACTTTAAAGATTTAAAAGAAGGAATCACTGGGAAGGAAGCCCTCCAACAAAATCCCGTACCTGTTTAG
Download CDS Sequence

Protein sequence (LotjaGi4g1v0380000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MELCSTTLSSPASTFVLNFQGPKLPKPFLQIYGRQKTLVYEQTSTRLSSGTCRATISAEAGKQGWDFGRFIKTLYFFNGP PSPAKFFDFLVEKLSSPSPSEPVSSMGTSDIVLVAGATGGVGRRVVDVLRKKGIPVRVLVRNEEKARRMLGSDVDLVVGD ITKDSTLVPEYFKGVKKVVNAVSVIVGPKEGDTPDRAKYSQGIKFFEPEIKGDSPEKVEYIGMKNLIKAVKDNLGLRRGK LLFGFEDNNYRQLSFGALDDVVMGGVSESTFLIDPSGNENGGPTGVFKGVVSTANNGGFTSTRTKNFSKPEDLSAYDGLE FRLKGDGRRYKVIVRTSSDWDALGYTAGFDTEKGKWQSIQVPFSSLRPIFRAKTVSDAPPFDPSIVMSLQLMFSKFEYDG KLNGTFVEGPFELPVSSIRAYIKDPITPRFVHVGSAGVTRPERPGLDLSKQPPAVRLNKELGSILTFKLKGEDLIRESGI PYAIVRPCALTEEPAGADLIFEQGDNITGKISREEIARLCVAALESPYACDKTFEVKSVVPFSEPFTLDPANPPPEKDYN VYFKDLKEGITGKEALQQNPVPV
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13194
88 582 495 3.4E-273
IPR039131
PANTHER
PTHR13194:SF19
88 582 495 3.4E-273 –
Gene3D
G3DSA:3.40.50.720
110 243 134 2.1E-22 –
SUPERFAMILY
SSF51735
111 538 428 1.85E-31
IPR036291
Pfam
PF13460
116 232 117 1.0E-10
IPR016040
SUPERFAMILY
SSF49785
242 396 155 1.11E-27
IPR008979
Gene3D
G3DSA:2.60.120.430
250 405 156 1.0E-9 –
Pfam
PF08547
251 415 165 3.3E-40
IPR013857
Gene3D
G3DSA:3.40.50.720
417 543 127 6.8E-22 –
Pfam
PF13460
428 527 100 2.4E-13
IPR016040

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0032981
Biological process Mitochondrial respiratory chain complex I assembly The aggregation, arrangement and bonding together of a set of components to form mitochondrial respiratory chain complex I.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0380000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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