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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3443810 |
| Transcript ID | Lj1g3v3443810.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: delta-1-pyrroline-5-carboxylate synthase-like [Glycine max] gi|356504258|ref|XP_003520914.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 717 | 717 | 0 | ||
| TIGRFAM | 8 | 716 | 709 | 0 | ||
| Gene3D | 10 | 287 | 278 | 1.30E-45 | ||
| TIGRFAM | 15 | 291 | 277 | 7.40E-59 | ||
| Hamap | 15 | 283 | 269 | 28.272 | ||
| SUPERFAMILY | 15 | 280 | 266 | 3.27E-52 | ||
| Pfam | 15 | 259 | 245 | 7.10E-35 | ||
| PRINTS | 52 | 66 | 15 | 2.30E-55 | ||
| PANTHER | 89 | 715 | 627 | 0 | – | |
| PANTHER | 89 | 715 | 627 | 0 | – | |
| PRINTS | 96 | 124 | 29 | 2.30E-55 | ||
| PRINTS | 136 | 157 | 22 | 2.30E-55 | ||
| PRINTS | 175 | 202 | 28 | 2.30E-55 | ||
| PRINTS | 234 | 254 | 21 | 2.30E-55 | ||
| Pfam | 292 | 569 | 278 | 6.50E-09 | ||
| Hamap | 294 | 700 | 407 | 33.472 | ||
| Gene3D | 294 | 510 | 217 | 3.80E-98 | ||
| SUPERFAMILY | 296 | 699 | 404 | 1.68E-92 | ||
| CDD | 297 | 696 | 400 | 0 | ||
| TIGRFAM | 302 | 689 | 388 | 3.50E-133 | ||
| Coils | 311 | 331 | 21 | – | – | |
| Gene3D | 512 | 657 | 146 | 3.10E-34 | ||
| Gene3D | 658 | 699 | 42 | 3.80E-98 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Glutamate-5-semialdehyde dehydrogenase activity | Catalysis of the reaction: L-glutamate 5-semialdehyde + NADP(+) + phosphate = L-glutamyl 5-phosphate + H(+) + NADPH. | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | Proline biosynthetic process | The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj1g3v3443810.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3443810.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.