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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR016435
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 11 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.615s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0235949.1
n.a. PREDICTED: diphthamide biosynthesis protein 2-like [Cicer arietinum] gi|502124464|ref|XP_004498540.1| chr0 122289933 122296579 +
4 domain predictions
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Lj0g3v0235949.2
n.a. PREDICTED: diphthamide biosynthesis protein 2-like [Cicer arietinum] gi|502124464|ref|XP_004498540.1| chr0 122289933 122295327 +
4 domain predictions
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Lj0g3v0235949.3
n.a. PREDICTED: diphthamide biosynthesis protein 2-like [Cicer arietinum] gi|502124464|ref|XP_004498540.1| chr0 122290035 122296579 +
4 domain predictions
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Lj1g3v3531570.1
n.a. PREDICTED: diphthamide biosynthesis protein 2-like [Cicer arietinum] gi|502124464|ref|XP_004498540.1| chr1 40532597 40557195 -
4 domain predictions
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Lj1g3v3531570.2
n.a. PREDICTED: diphthamide biosynthesis protein 2-like [Cicer arietinum] gi|502124464|ref|XP_004498540.1| chr1 40532597 40554695 -
4 domain predictions
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Lj1g3v3531570.3
n.a. PREDICTED: diphthamide biosynthesis protein 2-like [Cicer arietinum] gi|502124464|ref|XP_004498540.1| chr1 40532597 40541362 -
4 domain predictions
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Lj1g3v3531570.4
n.a. PREDICTED: diphthamide biosynthesis protein 2-like [Cicer arietinum] gi|502124464|ref|XP_004498540.1| chr1 40551890 40554695 -
4 domain predictions
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Lj2g3v2124830.1
n.a. PREDICTED: diphthamide biosynthesis protein 1-like [Cicer arietinum] gi|502159294|ref|XP_004511457.1| chr2 32014649 32016469 +
4 domain predictions
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LotjaGi1g1v0575100.1
n.a. Diphthamide biosynthesis protein; TAIR: AT3G59630.1 diphthamide synthesis DPH2 family protein; Swiss-Prot: sp|A4QN59|DPH2_DANRE Diphthamide biosynthesis protein 2; TrEMBL-Plants: tr|A0A0S3SFB0|A0A0S3SFB0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0575100 LjG1.1_chr1 110939145 110949517 -
5 domain predictions
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LotjaGi2g1v0448400.1
n.a. Diphthamide biosynthesis protein; TAIR: AT5G62030.1 diphthamide synthesis DPH2 family protein; Swiss-Prot: sp|Q54PW5|DPH1_DICDI Diphthamide biosynthesis protein 1; TrEMBL-Plants: tr|G7K6J3|G7K6J3_MEDTR Diphthamide biosynthesis protein; Found in the gene: LotjaGi2g1v0448400 LjG1.1_chr2 94223206 94224594 +
5 domain predictions
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LotjaGi2g1v0448400.2
n.a. Diphthamide biosynthesis protein; TAIR: AT5G62030.1 diphthamide synthesis DPH2 family protein; Swiss-Prot: sp|Q54PW5|DPH1_DICDI Diphthamide biosynthesis protein 1; TrEMBL-Plants: tr|G7K6J3|G7K6J3_MEDTR Diphthamide biosynthesis protein; Found in the gene: LotjaGi2g1v0448400 LjG1.1_chr2 94223246 94224595 +
5 domain predictions
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