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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR018268
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.471s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v4315320.1
n.a. PREDICTED: 40S ribosomal protein S20-1-like [Glycine max] gi|356504833|ref|XP_003521199.1| chr1 50654713 50656485 +
2 domain predictions
4 GO terms
Lj6g3v0775980.1
n.a. PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Cicer arietinum] gi|502146999|ref|XP_004506689.1| chr6 7386612 7388266 +
2 domain predictions
4 GO terms
Lj6g3v1091170.1
n.a. PREDICTED: 40S ribosomal protein S20-2-like [Cicer arietinum] gi|502107134|ref|XP_004493168.1| chr6 13258562 13259726 +
2 domain predictions
4 GO terms
LotjaGi1g1v0724100.1
n.a. 30S ribosomal protein S10; TAIR: AT3G45030.1 Ribosomal protein S10p/S20e family protein; Swiss-Prot: sp|P49200|RS201_ARATH 40S ribosomal protein S20-1; TrEMBL-Plants: tr|I3SJC9|I3SJC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0724100 LjG1.1_chr1 129528368 129532829 +
2 domain predictions
4 GO terms
LotjaGi1g1v0724100.2
n.a. 30S ribosomal protein S10; TAIR: AT3G45030.1 Ribosomal protein S10p/S20e family protein; Swiss-Prot: sp|P49200|RS201_ARATH 40S ribosomal protein S20-1; TrEMBL-Plants: tr|I3SJC9|I3SJC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0724100 LjG1.1_chr1 129528668 129530130 +
2 domain predictions
4 GO terms
LotjaGi6g1v0144700.1
n.a. 30S ribosomal protein S10; TAIR: AT3G13120.1 Ribosomal protein S10p/S20e family protein; Swiss-Prot: sp|Q9M4Y3|RR10_MESCR 30S ribosomal protein S10, chloroplastic; TrEMBL-Plants: tr|I3S9B7|I3S9B7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0144700 LjG1.1_chr6 41572135 41574629 +
2 domain predictions
4 GO terms
LotjaGi6g1v0209000.1
n.a. 30S ribosomal protein S10; TAIR: AT3G47370.1 Ribosomal protein S10p/S20e family protein; Swiss-Prot: sp|Q9STY6|RS202_ARATH 40S ribosomal protein S20-2; TrEMBL-Plants: tr|I3T0A3|I3T0A3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0209000 LjG1.1_chr6 50652757 50654777 -
2 domain predictions
4 GO terms
LotjaGi6g1v0209000.2
n.a. 30S ribosomal protein S10; TAIR: AT3G47370.1 Ribosomal protein S10p/S20e family protein; Swiss-Prot: sp|Q9STY6|RS202_ARATH 40S ribosomal protein S20-2; TrEMBL-Plants: tr|I3T0A3|I3T0A3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0209000 LjG1.1_chr6 50653069 50654105 -
2 domain predictions
4 GO terms
LotjaGi6g1v0209000.3
n.a. 30S ribosomal protein S10; TAIR: AT3G47370.1 Ribosomal protein S10p/S20e family protein; Swiss-Prot: sp|Q9STY6|RS202_ARATH 40S ribosomal protein S20-2; TrEMBL-Plants: tr|I3T0A3|I3T0A3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0209000 LjG1.1_chr6 50653069 50654117 -
2 domain predictions
4 GO terms