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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR022126
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 12 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.264s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v0424270.1
n.a. Serine/threonine protein kinase [Medicago truncatula] gi|357475991|ref|XP_003608281.1| chr4 5707741 5714818 -
2 domain predictions
1 GO term
Lj6g3v2116920.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Cicer arietinum] gi|502077540|ref|XP_004485681.1| chr6 24716994 24720932 -
2 domain predictions
1 GO term
Lj6g3v2130020.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Cicer arietinum] gi|502077540|ref|XP_004485681.1| chr6 24757026 24760897 -
2 domain predictions
1 GO term
Lj6g3v2132190.3
n.a. PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Cicer arietinum] gi|502077540|ref|XP_004485681.1| chr6 24794572 24800242 +
2 domain predictions
1 GO term
LotjaGi4g1v0047100.1
n.a. Serine/threonine-protein kinase; TAIR: AT4G21380.1 receptor kinase 3; Swiss-Prot: sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8; TrEMBL-Plants: tr|A0A0B2SLA2|A0A0B2SLA2_GLYSO Serine/threonine-protein kinase; Found in the gene: LotjaGi4g1v0047100 LjG1.1_chr4 5682051 5689177 -
2 domain predictions
1 GO term
LotjaGi6g1v0342000.1
n.a. Serine/threonine-protein kinase; TAIR: AT4G21380.1 receptor kinase 3; Swiss-Prot: sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8; TrEMBL-Plants: tr|I1ME77|I1ME77_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0342000 LjG1.1_chr6 65540367 65544725 -
2 domain predictions
1 GO term
LotjaGi6g1v0342700.1
n.a. Serine/threonine-protein kinase; TAIR: AT4G21380.1 receptor kinase 3; Swiss-Prot: sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8; TrEMBL-Plants: tr|V7BQM9|V7BQM9_PHAVU Serine/threonine-protein kinase; Found in the gene: LotjaGi6g1v0342700 LjG1.1_chr6 65580068 65590074 -
2 domain predictions
1 GO term
LotjaGi6g1v0342700.3
n.a. Serine/threonine-protein kinase; TAIR: AT4G21380.1 receptor kinase 3; Swiss-Prot: sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8; TrEMBL-Plants: tr|A0A151RBC2|A0A151RBC2_CAJCA Putative serine/threonine-protein kinase receptor; Found in the gene: LotjaGi6g1v0342700 LjG1.1_chr6 65584280 65589708 -
2 domain predictions
1 GO term
LotjaGi6g1v0342700.4
n.a. Serine/threonine-protein kinase; TAIR: AT4G21380.1 receptor kinase 3; Swiss-Prot: sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8; TrEMBL-Plants: tr|I1M2E9|I1M2E9_SOYBN Serine/threonine-protein kinase; Found in the gene: LotjaGi6g1v0342700 LjG1.1_chr6 65584280 65589708 -
2 domain predictions
1 GO term
LotjaGi6g1v0343200.1
n.a. Serine/threonine-protein kinase; TAIR: AT4G21380.1 receptor kinase 3; Swiss-Prot: sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8; TrEMBL-Plants: tr|G7IK53|G7IK53_MEDTR Serine/threonine-protein kinase; Found in the gene: LotjaGi6g1v0343200 LjG1.1_chr6 65613740 65620070 +
2 domain predictions
1 GO term
LotjaGi6g1v0343300.2
n.a. Serine/threonine-protein kinase; TAIR: AT4G21380.1 receptor kinase 3; Swiss-Prot: sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8; TrEMBL-Plants: tr|I1ME77|I1ME77_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0343300 LjG1.1_chr6 65626076 65632942 +
2 domain predictions
1 GO term
LotjaGi6g1v0343300.3
n.a. Serine/threonine-protein kinase; TAIR: AT4G21380.1 receptor kinase 3; Swiss-Prot: sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8; TrEMBL-Plants: tr|I1ME77|I1ME77_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0343300 LjG1.1_chr6 65626238 65632807 +
2 domain predictions
1 GO term