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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0342000 |
| Transcript ID | LotjaGi6g1v0342000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein kinase; TAIR: AT4G21380.1 receptor kinase 3; Swiss-Prot: sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8; TrEMBL-Plants: tr|I1ME77|I1ME77_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0342000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:65540367..65544725) extracted from Lotus japonicus Gifu genome v1.2.
CTTAGGAATGTGGTTCTCAACCTACTAAGAAACAAACATCTATTACACACCGGTCAACTAAGTCTTTCCCAAATGATAAT AATAATAGCCATGGTCTCTGCCTTCAAACTTGGGGTAGTGCCGGGTCAATGTTGCTCTTCTCTCCTCAACTTATAACTTA AACTATCAGGCAACTTGTGCTTGCAAACATCATATGATGACACTCCTCTTCTGCTTCTTCCTCTTTATTAGCTTCATCAC TCCACACACTTTTTCCACACCAGATACAATAACTGCTAAACTATCAACTTGTGTAATTAAGAAACCACGCACATCATGCA AGTCCTCTGCTTCTTCCTCTTTTGCTTCATGGCATTGGCGCCACACACTTTCTCAGCAGATACCTTAACCGCAACACAAA CTCTCGCAACCAACCAGACCCTCCAATCATCTAACGCTGTTTTCATCCTTGGATTCTTCCCCAGCAGCACCAATCCCACT TCGTACTACCTGGGCATATGGTACAAGGACTTGGGTGATAGAACAGTGGTTTGGGTGGCAAACAGAGACAACCCAGTTAT TGACAACAACTCCACAGGATTAATATCTCTCAAGATCAACTCAGAAAATGGAAACATAGCTCTTGTTAACTCATCTGCAG GGAACCCTGTATGGTCCTCCACCAATCAAACCAAAGCTAGCAACCCAGTTCTTCAGCTTTTGGACACTGGCAATTTAGTT ATTAGAGAAGAAGCTTCCCATGCTAGTAATAATTATCTATGGCAGAGCTTTGATCACCCAACGGATACGTTGTTACCGGA TATGTACATGGGTTGGAACCTAGACAAGGGCACGGAGGATCACCTAACATCATGGAGGGACACAGATAAAGATCCTTCAA CCGGCGATTGCACGTTGAAGATACGTCCTCAAGGACTCCCAGAAGGTTACCTGCGGATAAACCAGACCAAAATATATAGA AGTGGGCCTTGGAATGGTGACAGATTCAGCGGGGTGCCGGAGATGAAGCATAATACGAATTCTATTGTGTTCAACTTCTC CGCACAACAACATGGGGTGTACTACTCGTTCCATATTGGCAACCGATCCATTTTCTCAAGGCTTATAGTCACCTCTAGTG GTGAACTTCAGCGCCTCACATGGGTTCCTAGCAGCCAGAGTTGGAACAAGTTCTGGTATGCACCGAAAGATGAGTGTGAC CATTACAGAACGTGTGGTCCTTATGGTATCTGCGATGCTGATGCTTCACCGATATGCAAGTGTGTGAGCGGGTTCAGCCC CAAGAATCAGCAGGCTTGGAATTTGAGACAAGGGTCTGGTGGGTGTGTGAGGAACAACAATTTGGACTGCAGGAGTGATA AATTTTTGACTGTTAAGGTCAAGTTGCCTGACACAACCATGGTATATATGAACAGGAGTATGAACCTTGTGGAATGTAAA GATTTGTGCAGAAGGAACTGTTCTTGCACTGCTTATGCCAACATTGAGACCGCCAATGGAGGGACTGGTTGTGTCATGTG GATTGGTGAGCTCATTGACATGAGGCAGTACGCTGCTGGTGGTCAAGATCTCTATGTCAGATTAGCAGCTTCAGATGTTG GTACGTACATGCTTTCTCCTTTCATTTCTATGTCAGATTATTATGGTTGGTGCGATTCGAGGGTTCAATTTTGGAAACAA TAATAATCGAAGGGCATCTAAATGAGTATTATCTCCGGTCCTATTATAAGAAGCAAATTTTTTTTTTACATAATTTAAGA AATGTTAGTTGTTAATTCACTTAATTGTATGGGGTTACTAACATTATAAAAAAAATGTAAATCATAATTGAAATATAATA ACGTGTTTGATTTTATAAAAAGGGGGTCCTTTTTTTTTGCAGATGACTCTCACAAGAAAAATAACAGTGCTAGGATTGCA GGAACTACAGTTTGTGCAGTTGCTGTAATTTTAGGATTATTGGGTTTCATTTTATTTAGGAAGAGGAAATTGCTAAGTAG ATTCAATGGGAAGACAAACTCCAAAGGTAATGGAGTATATCATAATGTCCCTCCTTATAACTGCACAATTTATATATATA GTGTGCTAGCTACATAATAAAGTTTATTGGTTCTTGTTCTCGTCATTGAACCAGGTTCTCTCCAAAGAAATCGGGATTTG CTAATGAATGAGGTGATATTTCCAACTAATAGAGATAGAGAAAACTCAGGAGAAAGTAACATGGATGAACTAGATTTGCC ATTATTTGATTTTAATACCATAACAATGGCTACAAACAATTTCTCTGAAGCAAATAAACTTGGGGAAGGAGGATTTGGTA TTGTCTACATGGTAGGTTGTTTTTATAGCTGTTAACTTATTTCAAAATCGCAAAACACACACAACACATAACACATCTTT CCTAACATGACTGATTATACATGGCTATACCAGGGCAGGTTAGTGGAAGGCCAAGAAATTGCTGTCAAGAGGTTGTCTAA GAACTCTGGGCAAGGAACTGAAGAGTTTAAGAATGAAGTGAAGTTAATTATCAAGCTTCAACATCGAAATCTTGTGCGGC TATTTGGTTGCTGCATTGAGATGAATGAAAAGCTTCTGGTGTATGAGTACATGGAGAATAAAAGTCTCGATTCCTTTTTG TTTGGTGAGTTGCTTTAATATTTTGTATTTTAGAGCCCCTTTTTGTTTGGTGGAAAACTAAATTAATTGTTTGTATAATA TAGACAACTAGGCTTGTTTTGCTTATTATGGTTTTGTGAATCTTCTAAATCAAATATTTACAACAAATGGTGTTCCAGAC AAAACCAGAAATCACTTACTAGACTGGAAGATGCGCTTCAACATTATATGTGGAATAGCTAGAGGGCTTCTATATCTGCA CCATGATTCTAGATTAAGGATTATTCATAGGGATCTCAAGGTAAGCAACATTCTTCTTGACAGTGAAATGAACCCAAAAA TATCAGACTTTGGTCTGGCTAGAATTTTTGCCACAAATCAGACAGAAGCAAATACACTCAGGGTTGTTGGAACATAGTGA GTACAACAACATTGTACTATTTTTCTCTCCAAAACACAAAATGTGGTGACCTTAGTTCTAATTTGTATATGTTTTCAATG CGCAGTGGCTATATGTCTCCTGAATATGCTTTGGATGGGAACTTCTCAGTGAAGTCTGATGTTTTTAGCTTTGGAGTTCT TGTGCTAGAGATCATAACTGGAAAGAAGAATAGAGGATTCTACTACTCTAACAAAGATATGAATCTTTTAGGGAATGTAC GTGGAGTGCTATGTAGTTGAAAATATCATTTTGTGTTAACAAACAATTGCTGATGCTTTTTTCTTGTGGTAGGCTTGGAG GCATTGGAGAGAAGGCAATGCATTAGAGCTTATTGATGAATCAATTAGTGGTTCATATTCAGCGTGTGAAGTTCTTAGAT GCATACATATTGGGCTCTTGTGTGTTCAAGAACTTGCAGATGATAGACCAACAATGTCTTCAGTGATCTTAATGTTGAAC AATGAAACTCCATTAGTGCTACAACCTAGAAACCCTGGGTTTTGCCTAGGAAAGAATCCTCCAAAGACTGATTCTTCTTC AAGTAATCAAGATGAAACCTGGAGTGTGAACCAAGTTACAGTCACATTACTAGATGCAAGATAATGAAAAGAGCATGACA TCATCTGATTTGCTGTATATTCCCAAAATCACAAAATTAAGGGTTGTTTAAATTACCCTAGACACAATTTGGGTTAAATC ACCCTAATCCAAGGTGGACCTTTGATATTTAAGATAAATAGATAAATATGAAATTCATAATTCTCTTATCTTGAATGTCA TTTTTTTTAAGGCAACTTATCTTGAATGGCATTGGTTCACCAAAGACTAGGGTTATTTAACACAAACATGCTTCTTGTTC CTAGCATGTTCCTTTGTATTTCTCTGTTTTGGATAGCTCTGTTTATGTCTATGTGCTAGAGCTCTTCCATTCTTTCTTCT CATTGTATTAAGGGTTGGAGTACCGGTCCCTTGTACTCCCTTTAATGCAATCTTTGGCTTATGAAAAAAAAAATTAACAC AAACTTTACCTAAGGTCATTTAGACAACTCAATAAAATGATTATGTAAATCTTCATGTTTCTGATAGTTGAGACATTTTT TAAATATGTTCTGATCTTGTTCTAGTATAATGAGATATTGTCATTGAAAACATTACTCAGATCCTGAAGCTACTTCTGTT TACTATTTACATCCATATTTATATACTTTCGCATGGTTGTCACTTTGTCCAGCAGTTGCACGGTTCAGAAATTAACTAAA ACCAAAAACCAAATTATTGTATCAGAAATCAATTCTGTA
CDS sequence (LotjaGi6g1v0342000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAAGTCCTCTGCTTCTTCCTCTTTTGCTTCATGGCATTGGCGCCACACACTTTCTCAGCAGATACCTTAACCGCAAC ACAAACTCTCGCAACCAACCAGACCCTCCAATCATCTAACGCTGTTTTCATCCTTGGATTCTTCCCCAGCAGCACCAATC CCACTTCGTACTACCTGGGCATATGGTACAAGGACTTGGGTGATAGAACAGTGGTTTGGGTGGCAAACAGAGACAACCCA GTTATTGACAACAACTCCACAGGATTAATATCTCTCAAGATCAACTCAGAAAATGGAAACATAGCTCTTGTTAACTCATC TGCAGGGAACCCTGTATGGTCCTCCACCAATCAAACCAAAGCTAGCAACCCAGTTCTTCAGCTTTTGGACACTGGCAATT TAGTTATTAGAGAAGAAGCTTCCCATGCTAGTAATAATTATCTATGGCAGAGCTTTGATCACCCAACGGATACGTTGTTA CCGGATATGTACATGGGTTGGAACCTAGACAAGGGCACGGAGGATCACCTAACATCATGGAGGGACACAGATAAAGATCC TTCAACCGGCGATTGCACGTTGAAGATACGTCCTCAAGGACTCCCAGAAGGTTACCTGCGGATAAACCAGACCAAAATAT ATAGAAGTGGGCCTTGGAATGGTGACAGATTCAGCGGGGTGCCGGAGATGAAGCATAATACGAATTCTATTGTGTTCAAC TTCTCCGCACAACAACATGGGGTGTACTACTCGTTCCATATTGGCAACCGATCCATTTTCTCAAGGCTTATAGTCACCTC TAGTGGTGAACTTCAGCGCCTCACATGGGTTCCTAGCAGCCAGAGTTGGAACAAGTTCTGGTATGCACCGAAAGATGAGT GTGACCATTACAGAACGTGTGGTCCTTATGGTATCTGCGATGCTGATGCTTCACCGATATGCAAGTGTGTGAGCGGGTTC AGCCCCAAGAATCAGCAGGCTTGGAATTTGAGACAAGGGTCTGGTGGGTGTGTGAGGAACAACAATTTGGACTGCAGGAG TGATAAATTTTTGACTGTTAAGGTCAAGTTGCCTGACACAACCATGGTATATATGAACAGGAGTATGAACCTTGTGGAAT GTAAAGATTTGTGCAGAAGGAACTGTTCTTGCACTGCTTATGCCAACATTGAGACCGCCAATGGAGGGACTGGTTGTGTC ATGTGGATTGGTGAGCTCATTGACATGAGGCAGTACGCTGCTGGTGGTCAAGATCTCTATGTCAGATTAGCAGCTTCAGA TGTTGATGACTCTCACAAGAAAAATAACAGTGCTAGGATTGCAGGAACTACAGTTTGTGCAGTTGCTGTAATTTTAGGAT TATTGGGTTTCATTTTATTTAGGAAGAGGAAATTGCTAAGTAGATTCAATGGGAAGACAAACTCCAAAGGTTCTCTCCAA AGAAATCGGGATTTGCTAATGAATGAGGTGATATTTCCAACTAATAGAGATAGAGAAAACTCAGGAGAAAGTAACATGGA TGAACTAGATTTGCCATTATTTGATTTTAATACCATAACAATGGCTACAAACAATTTCTCTGAAGCAAATAAACTTGGGG AAGGAGGATTTGGTATTGTCTACATGGGCAGGTTAGTGGAAGGCCAAGAAATTGCTGTCAAGAGGTTGTCTAAGAACTCT GGGCAAGGAACTGAAGAGTTTAAGAATGAAGTGAAGTTAATTATCAAGCTTCAACATCGAAATCTTGTGCGGCTATTTGG TTGCTGCATTGAGATGAATGAAAAGCTTCTGGTGTATGAGTACATGGAGAATAAAAGTCTCGATTCCTTTTTGTTTGACA AAACCAGAAATCACTTACTAGACTGGAAGATGCGCTTCAACATTATATGTGGAATAGCTAGAGGGCTTCTATATCTGCAC CATGATTCTAGATTAAGGATTATTCATAGGGATCTCAAGGTAAGCAACATTCTTCTTGACAGTGAAATGAACCCAAAAAT ATCAGACTTTGGTCTGGCTAGAATTTTTGCCACAAATCAGACAGAAGCAAATACACTCAGGGTTGTTGGAACATATGGCT ATATGTCTCCTGAATATGCTTTGGATGGGAACTTCTCAGTGAAGTCTGATGTTTTTAGCTTTGGAGTTCTTGTGCTAGAG ATCATAACTGGAAAGAAGAATAGAGGATTCTACTACTCTAACAAAGATATGAATCTTTTAGGGAATGCTTGGAGGCATTG GAGAGAAGGCAATGCATTAGAGCTTATTGATGAATCAATTAGTGGTTCATATTCAGCGTGTGAAGTTCTTAGATGCATAC ATATTGGGCTCTTGTGTGTTCAAGAACTTGCAGATGATAGACCAACAATGTCTTCAGTGATCTTAATGTTGAACAATGAA ACTCCATTAGTGCTACAACCTAGAAACCCTGGGTTTTGCCTAGGAAAGAATCCTCCAAAGACTGATTCTTCTTCAAGTAA TCAAGATGAAACCTGGAGTGTGAACCAAGTTACAGTCACATTACTAGATGCAAGATAA
Protein sequence (LotjaGi6g1v0342000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQVLCFFLFCFMALAPHTFSADTLTATQTLATNQTLQSSNAVFILGFFPSSTNPTSYYLGIWYKDLGDRTVVWVANRDNP VIDNNSTGLISLKINSENGNIALVNSSAGNPVWSSTNQTKASNPVLQLLDTGNLVIREEASHASNNYLWQSFDHPTDTLL PDMYMGWNLDKGTEDHLTSWRDTDKDPSTGDCTLKIRPQGLPEGYLRINQTKIYRSGPWNGDRFSGVPEMKHNTNSIVFN FSAQQHGVYYSFHIGNRSIFSRLIVTSSGELQRLTWVPSSQSWNKFWYAPKDECDHYRTCGPYGICDADASPICKCVSGF SPKNQQAWNLRQGSGGCVRNNNLDCRSDKFLTVKVKLPDTTMVYMNRSMNLVECKDLCRRNCSCTAYANIETANGGTGCV MWIGELIDMRQYAAGGQDLYVRLAASDVDDSHKKNNSARIAGTTVCAVAVILGLLGFILFRKRKLLSRFNGKTNSKGSLQ RNRDLLMNEVIFPTNRDRENSGESNMDELDLPLFDFNTITMATNNFSEANKLGEGGFGIVYMGRLVEGQEIAVKRLSKNS GQGTEEFKNEVKLIIKLQHRNLVRLFGCCIEMNEKLLVYEYMENKSLDSFLFDKTRNHLLDWKMRFNIICGIARGLLYLH HDSRLRIIHRDLKVSNILLDSEMNPKISDFGLARIFATNQTEANTLRVVGTYGYMSPEYALDGNFSVKSDVFSFGVLVLE IITGKKNRGFYYSNKDMNLLGNAWRHWREGNALELIDESISGSYSACEVLRCIHIGLLCVQELADDRPTMSSVILMLNNE TPLVLQPRNPGFCLGKNPPKTDSSSSNQDETWSVNQVTVTLLDAR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 21 | 21 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| PIRSF | 1 | 845 | 845 | 1.0E-287 | ||
| Phobius | 3 | 14 | 12 | - | – | |
| Phobius | 15 | 21 | 7 | - | – | |
| ProSiteProfiles | 21 | 149 | 129 | 18.131 | ||
| Gene3D | 21 | 153 | 133 | 3.3E-15 | ||
| Phobius | 22 | 439 | 418 | - | – | |
| SMART | 27 | 155 | 129 | 4.2E-34 | ||
| CDD | 33 | 155 | 123 | 4.33011E-31 | ||
| SUPERFAMILY | 57 | 220 | 164 | 2.62E-25 | ||
| Pfam | 70 | 181 | 112 | 4.4E-34 | ||
| Pfam | 214 | 324 | 111 | 7.0E-37 | ||
| ProSiteProfiles | 290 | 326 | 37 | 8.758 | ||
| CDD | 342 | 424 | 83 | 3.41426E-25 | – | |
| SMART | 345 | 423 | 79 | 1.6E-11 | ||
| ProSiteProfiles | 345 | 424 | 80 | 9.247 | ||
| Pfam | 345 | 409 | 65 | 2.9E-18 | ||
| PANTHER | 385 | 809 | 425 | 7.2E-140 | – | |
| PANTHER | 385 | 809 | 425 | 7.2E-140 | – | |
| TMHMM | 438 | 460 | 23 | - | – | |
| Phobius | 440 | 460 | 21 | - | – | |
| Phobius | 461 | 845 | 385 | - | – | |
| Pfam | 480 | 516 | 37 | 2.5E-6 | ||
| Gene3D | 500 | 601 | 102 | 2.2E-37 | – | |
| SUPERFAMILY | 511 | 822 | 312 | 1.25E-82 | ||
| ProSiteProfiles | 526 | 804 | 279 | 37.375 | ||
| SMART | 526 | 804 | 279 | 1.9E-32 | ||
| Pfam | 529 | 794 | 266 | 9.7E-47 | ||
| ProSitePatterns | 532 | 554 | 23 | - | ||
| CDD | 532 | 799 | 268 | 1.2512E-91 | – | |
| Gene3D | 602 | 804 | 203 | 8.3E-60 | – | |
| ProSitePatterns | 647 | 659 | 13 | - | ||
| Pfam | 806 | 845 | 40 | 2.6E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Recognition of pollen | The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species. |
Expression pattern of LotjaGi6g1v0342000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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