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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR022412
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We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.808s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi2g1v0061600.1
n.a. Nicotinate-nucleotide pyrophosphorylase [carboxylating]; TAIR: AT2G01350.1 quinolinate phoshoribosyltransferase; Swiss-Prot: sp|Q9ZU32|NADC_ARATH Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic; TrEMBL-Plants: tr|A0A072VQY4|A0A072VQY4_MEDTR Quinolinate phosphoribosyltransferase, putative; Found in the gene: LotjaGi2g1v0061600 LjG1.1_chr2 13468109 13494538 +
2 domain predictions
1 GO term
LotjaGi2g1v0061600.2
n.a. Nicotinate-nucleotide pyrophosphorylase [carboxylating]; TAIR: AT2G01350.1 quinolinate phoshoribosyltransferase; Swiss-Prot: sp|Q9ZU32|NADC_ARATH Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic; TrEMBL-Plants: tr|A0A0B2RX79|A0A0B2RX79_GLYSO Putative nicotinate-nucleotide pyrophosphorylase [carboxylating]; Found in the gene: LotjaGi2g1v0061600 LjG1.1_chr2 13469366 13491340 +
2 domain predictions
1 GO term
LotjaGi2g1v0061600.3
n.a. Nicotinate-nucleotide pyrophosphorylase [carboxylating]; TAIR: AT2G01350.1 quinolinate phoshoribosyltransferase; Swiss-Prot: sp|Q9ZU32|NADC_ARATH Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic; TrEMBL-Plants: tr|A0A0B2S2R6|A0A0B2S2R6_GLYSO Putative nicotinate-nucleotide pyrophosphorylase [carboxylating]; Found in the gene: LotjaGi2g1v0061600 LjG1.1_chr2 13469539 13489957 +
2 domain predictions
1 GO term
LotjaGi2g1v0061600.4
n.a. Nicotinate-nucleotide pyrophosphorylase [carboxylating]; TAIR: AT2G01350.1 quinolinate phoshoribosyltransferase; Swiss-Prot: sp|Q9ZU32|NADC_ARATH Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic; TrEMBL-Plants: tr|A0A0B2RX79|A0A0B2RX79_GLYSO Putative nicotinate-nucleotide pyrophosphorylase [carboxylating]; Found in the gene: LotjaGi2g1v0061600 LjG1.1_chr2 13469539 13491340 +
2 domain predictions
1 GO term
LotjaGi2g1v0061600.5
n.a. Nicotinate-nucleotide pyrophosphorylase [carboxylating]; TAIR: AT2G01350.1 quinolinate phoshoribosyltransferase; Swiss-Prot: sp|Q9ZU32|NADC_ARATH Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic; TrEMBL-Plants: tr|A0A0B2S2R6|A0A0B2S2R6_GLYSO Putative nicotinate-nucleotide pyrophosphorylase [carboxylating]; Found in the gene: LotjaGi2g1v0061600 LjG1.1_chr2 13469549 13491340 +
2 domain predictions
1 GO term
LotjaGi2g1v0061600.6
n.a. Nicotinate-nucleotide pyrophosphorylase [carboxylating]; TAIR: AT2G01350.1 quinolinate phoshoribosyltransferase; Swiss-Prot: sp|Q9ZU32|NADC_ARATH Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic; TrEMBL-Plants: tr|A0A0B2S2R6|A0A0B2S2R6_GLYSO Putative nicotinate-nucleotide pyrophosphorylase [carboxylating]; Found in the gene: LotjaGi2g1v0061600 LjG1.1_chr2 13469549 13491340 +
2 domain predictions
1 GO term