Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR022666
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 13 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.029s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0038539.1
n.a. Translation protein SH3-like [Medicago truncatula] gi|87241572|gb|ABD33430.1| chr0 12535586 12536026 +
2 domain predictions
3 GO terms
Lj2g3v1705410.1
n.a. PREDICTED: 60S ribosomal protein L8-like [Cicer arietinum] gi|502161332|ref|XP_004512125.1| chr2 26303210 26304681 +
2 domain predictions
3 GO terms
Lj4g3v1108210.1
n.a. Translation protein SH3-like [Medicago truncatula] gi|87241572|gb|ABD33430.1| chr4 16633388 16633828 +
2 domain predictions
3 GO terms
LotjaGi1g1v0474100.1
n.a. 50S ribosomal protein L2; TAIR: AT4G36130.1 Ribosomal protein L2 family; Swiss-Prot: sp|P29766|RL8_SOLLC 60S ribosomal protein L8; TrEMBL-Plants: tr|A0A1J7GHV1|A0A1J7GHV1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0474100 LjG1.1_chr1 98446755 98449633 +
2 domain predictions
3 GO terms
LotjaGi1g1v0550100.7
n.a. 50S ribosomal protein L2; TAIR: AT2G07715.1 Nucleic acid-binding, OB-fold-like protein; Swiss-Prot: sp|P0C8K6|RM02_ORYSA 60S ribosomal protein L2, mitochondrial; TrEMBL-Plants: tr|A0A0L9TDN8|A0A0L9TDN8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0550100 LjG1.1_chr1 108053795 108054978 -
2 domain predictions
3 GO terms
LotjaGi2g1v0005300.1
n.a. 50S ribosomal protein L2; TAIR: AT4G36130.1 Ribosomal protein L2 family; Swiss-Prot: sp|Q42064|RL83_ARATH 60S ribosomal protein L8-3; TrEMBL-Plants: tr|V7CDF5|V7CDF5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0005300 LjG1.1_chr2 1864948 1865857 +
2 domain predictions
3 GO terms
LotjaGi2g1v0382300.1
n.a. 50S ribosomal protein L2; TAIR: AT4G36130.1 Ribosomal protein L2 family; Swiss-Prot: sp|P29766|RL8_SOLLC 60S ribosomal protein L8; TrEMBL-Plants: tr|A0A0L9TBY3|A0A0L9TBY3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0382300 LjG1.1_chr2 87892092 87893522 +
2 domain predictions
3 GO terms
LotjaGi2g1v0382300.2
n.a. 50S ribosomal protein L2; TAIR: AT4G36130.1 Ribosomal protein L2 family; Swiss-Prot: sp|P29766|RL8_SOLLC 60S ribosomal protein L8; TrEMBL-Plants: tr|A0A0L9TBY3|A0A0L9TBY3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0382300 LjG1.1_chr2 87892176 87894154 +
2 domain predictions
3 GO terms
LotjaGi4g1v0127000.1
n.a. 50S ribosomal protein L2; TAIR: AT4G36130.1 Ribosomal protein L2 family; Swiss-Prot: sp|Q42064|RL83_ARATH 60S ribosomal protein L8-3; TrEMBL-Plants: tr|V7CDF5|V7CDF5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0127000 LjG1.1_chr4 18537644 18539559 -
2 domain predictions
3 GO terms
LotjaGi4g1v0167900_LC.1
n.a. Ribosomal protein L2 family; TAIR: AT4G36130.1 Ribosomal protein L2 family; Swiss-Prot: sp|P29766|RL8_SOLLC 60S ribosomal protein L8; TrEMBL-Plants: tr|A0A1J7H357|A0A1J7H357_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0167900_LC LjG1.1_chr4 32202047 32212682 -
2 domain predictions
3 GO terms
LotjaGi4g1v0167900_LC.2
n.a. Ribosomal protein L2 family; TAIR: AT4G36130.1 Ribosomal protein L2 family; Swiss-Prot: sp|P29766|RL8_SOLLC 60S ribosomal protein L8; TrEMBL-Plants: tr|A0A1J7H357|A0A1J7H357_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0167900_LC LjG1.1_chr4 32202098 32212682 -
2 domain predictions
3 GO terms
LotjaGi4g1v0167900_LC.3
n.a. Ribosomal protein L2 family; TAIR: AT4G36130.1 Ribosomal protein L2 family; Swiss-Prot: sp|P29766|RL8_SOLLC 60S ribosomal protein L8; TrEMBL-Plants: tr|A0A1J7H357|A0A1J7H357_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0167900_LC LjG1.1_chr4 32202107 32212682 -
2 domain predictions
3 GO terms
LotjaGi4g1v0167900_LC.4
n.a. Ribosomal protein L2 family; TAIR: AT4G36130.1 Ribosomal protein L2 family; Swiss-Prot: sp|P29766|RL8_SOLLC 60S ribosomal protein L8; TrEMBL-Plants: tr|A0A1J7H357|A0A1J7H357_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0167900_LC LjG1.1_chr4 32202108 32212682 -
2 domain predictions
3 GO terms